Alexandromys fortis (reed vole): 126502267
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Entry
126502267 CDS
T08493
Name
(RefSeq) trinucleotide repeat-containing gene 6A protein isoform X1
KO
K18412
trinucleotide repeat-containing gene 6 protein
Organism
mfot
Alexandromys fortis (reed vole)
Brite
KEGG Orthology (KO) [BR:
mfot00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mfot03019
]
126502267
03036 Chromosome and associated proteins [BR:
mfot03036
]
126502267
Messenger RNA biogenesis [BR:
mfot03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
126502267
Chromosome and associated proteins [BR:
mfot03036
]
Eukaryotic type
Gene silencing
piRNA pathway
126502267
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TNRC6-PABC_bdg
Ago_hook
RRM_1
RRM_occluded
Motif
Other DBs
NCBI-GeneID:
126502267
NCBI-ProteinID:
XP_049999089
LinkDB
All DBs
Position
Unknown
AA seq
1905 aa
AA seq
DB search
MQLVAEPGLEARCPGSQDTPLPEEWNRDLVQEEEQLMEEKKKKKDDKKKKEAAQKKATEQ
KIKVPEQIKPSVSQPQPANSDNGTSTATSTNNNAKRATASNQQPPPQQQQQQQQEQQQQP
QALPRYPREVPPRFRHQEHKQLLKRGQHFPVIAANLGSAVKVLNNQSESSAVTNQQPPNN
GELQNSKTQSDINHNTSGSHYENCQRGPVSSTSDCSTSCKNAVKDLLEKEAWPSAPGSDP
ELASECMDADSASSSESERNITVMASGNTGGEKDGLRNSTGLGSQSKFVVGSSSNNVGHG
SSSGPWGFPHGAIISTCQVSVDAPESKSESSNNRMNAWGTVSSSSNGGLNPSTLNSASNH
GAWPVLENNGLALKGPVGSGSSGINIQCSTIGQMPNNQSINSKVSGSSTHGTWGNLQETC
EPEVSGTQKVSFSGQPQNITTETTGPNNTTNFMTSSLPNSGSVQNNELPTSNPGAWRVST
MNHPQIQAPSVMNGTSLSHLSNGESKTGGSYGTTWGAYGSNYSGDKCAGPNGQANGDTVN
ATLMQPGVNGPMGTNFQVTTNKGGGVWEPGTTNSQSSPWGSGNGANSGGSRRGWGSPAQN
TGTSLPSVEWNKLPSNQHSNDSANGNGKKFTNGWKSTEEEDQGSATSQTNEQNSVWAKTG
GTVESDGSTESTGRLEEKVTGESQSRDRRKIDQHTLLQSIVNRTDLDPRVLSNSGWGQTP
IKQNTAWDTETSPRGERKTDNGTEAWGSSATQTFNSGACIDKTSPNSNDTSSVSGWGDPK
PTLRWGDSKGSNCQGGWEDDSAATGMVKSNQWGNCKEEKSAWNDSQKNKQGWGDGQKSNQ
GWSISASDNWGETSRSNHWGEANKKSSSGGSDSDRSISGWNELGKTSSFTWGNNINPNNS
SGWDESSKPNSSQGWGDPPKCNQSLGWGDSSKPVSSPDWNKQQDIVGSWGIPPATGKPPG
TGWLGGPIPAPTKEEEPTGWEEPSPESIRRKMEIDDGTSAWGDPSKYNYKNVNMWNKNIP
DGNSRSDQQAQMHRLLPSASAVSSKEASSGSGWGEPWGEPSTPATTVDNGTSAWGKPIDS
GPSWGEPITAASSTSTWGSTSVGPQSLSKSGPKSMQDGWCGDDMPLPGSRPTGWEEEEDV
EIGMWNSNSSQELNSSLNWPPYTKKMSSKGLSGKKRRRERGMMKGGNKQEDAWINPFVKQ
FSNISFSRDSPEENVQSNKMDLSGGMLQDKRMEIDKHSLNIGDYNRTVGKGPGSRPQISK
ESSMERNPYFDKNGNPSMFGVGNTAAQPRGMQQPPAQPLSSSQPNLRAQVPPPLLSPQVP
VSLLKYAPNNGGLNPLFGPQQVAMLNQLSQLNQLSQISQLQRLLAQQQRVQNQRSVPSAN
RQQQDQQGRPLSVQQQMMQQSRQLDPSLLVKQQTPPSQQPLHQPAMKSFLDNVMPHTTPE
LQKGPSPVNAFSNFPIGLNSNLNVNMDMNSIKEPQSRLRKWTTVDSISVNTSLDQNSSKH
GAISSGFRLEESPFVPYDFMNSSTSPASPPGSIGDGWPRAKSPNGSSSVNWPPEFRPGEP
WKGYPNIDPETDPYVTPGSVINSLSINTVREVDHLRDRNSGSSSSLNTTLPSTSAWSSIR
ASNYNVPLSSTAQSTSARNSDSKLTWSPGSVTNTSLAHELWKVPLPPKNITAPSRPPPGL
TGQKPPLSTWDNSPLRVGGGWGNSDARYTPGSSWGESSSGRITNWLVLKNLTPQIDGSTL
RTLCMQHGPLITFHLNLQHGNALVRYSSKEEVVKAQKSLHMCVLGNTTILAEFASEEEIS
RFFAQSQSLTPSPGWQSLGSSQSRLGSLDCSHSFSSRTDLNHWNGAGLSGTNCGDLHGTS
LWGTPHYSTSLWGPPSSSDPRGISSPSPINAFLSVDHLGGGGESM
NT seq
5718 nt
NT seq
+upstream
nt +downstream
nt
atgcaactagtggcagagcccggcctcgaagccaggtgtcctggatcgcaagataccccc
ctgcctgaggaatggaacagggatttagtgcaagaagaagaacagttgatggaagaaaag
aaaaagaaaaaagacgacaagaaaaagaaggaagctgctcaaaagaaggccactgaacaa
aaaatcaaagtgccagaacagataaagcccagtgtaagccagcctcagcctgccaactct
gataacggcacttccacagcaaccagcactaataataatgccaagcgagctacagccagc
aatcagcagccgccgccgcagcagcaacagcagcagcagcaagagcagcaacagcagcca
caggccttgcctcggtatcctcgtgaagtacctccacgatttcgccaccaggaacacaaa
cagcttctaaagaggggtcagcattttcctgtcatagcagcaaacctgggatctgctgtt
aaggtgttaaacaaccaatcagaaagcagtgctgtaacaaatcaacagccaccaaataac
ggagagttgcagaacagcaaaacccagtcagatataaatcataatacttcaggatcccat
tatgaaaattgccagcggggacctgtgtcttctacaagtgactgtagcacaagctgtaag
aatgctgtaaaggacttgttggaaaaagaagcatggccctcagcccctggcagtgatcct
gagttggcctcagaatgtatggatgctgattctgcctccagttctgagtcagagagaaac
atcactgtcatggcttcagggaatacaggaggtgaaaaagatggccttcggaacagcact
ggactcggttctcaaagcaagtttgtggttggtagcagcagcaataatgtgggccatgga
agtagttctgggccatggggcttcccccatggagccataataagcacatgtcaggtctct
gtggatgctcctgaaagcaaatcagaaagtagtaacaatagaatgaatgcttggggcact
gtaagttcttcatcaaatggagggttaaatccaagcactttgaattcagctagcaaccat
ggtgcctggccagtattagaaaacaatggacttgccctaaaagggcctgtcgggagtggg
agttctggcatcaatattcagtgtagtaccataggccagatgcctaacaatcagagtatc
aactctaaagtcagtggctcttctacccatggtacctggggcaaccttcaggaaacttgt
gagcctgaagtaagtggtacacagaaggtttcattcagtggtcaacctcagaatatcacc
actgaaacaactggaccaaataacactactaactttatgacctctagtttaccaaactcc
ggttcagtacagaataatgaactgcctaccagtaatccaggggcctggcgtgtgagcaca
atgaatcatcctcagatacaggctccgtcagttatgaatggcacttccctttctcacctt
agcaatggagagtcaaaaactggaggctcctacggtactacatggggtgcctatggttct
aattactctggtgacaaatgtgcaggccctaacggccaagccaatggtgacactgtgaat
gcaactctaatgcagcctggcgtaaatgggcctatgggcactaactttcaagttaccaca
aataaagggggaggtgtgtgggagcctgggacaacaaattcccagagttcaccatgggga
agtggaaatggtgcgaattctggaggaagtcgaagaggatggggaagtcctgcacagaac
actggcactagtctacccagtgttgagtggaacaaactgcctagcaatcagcattccaat
gacagtgcaaatggcaatggtaagaagtttacaaatggatggaaatctactgaggaagag
gatcagggttctgccacatctcagacaaatgagcaaaacagtgtgtgggccaaaacagga
ggcacagtggagagcgatggtagtacagagagcactggacgccttgaagaaaaagtaacg
ggggaaagtcagagtagagatagaagaaaaattgatcagcacacattactccaaagcatt
gtaaacagaactgacttagatccacgtgtcctatccaactctggttggggacagactcct
attaagcagaatactgcctgggatacagagacatcaccaagaggggaaagaaaaactgac
aatgggacagaggcctggggaagctctgcaacacagacttttaactcaggggcatgtata
gataagactagccctaatagtaatgatacctcatctgtatcagggtggggcgatcccaaa
cctactctgaggtggggagattccaaaggctcaaactgccagggggggtgggaagatgat
tctgctgctacaggaatggttaagagcaatcagtgggggaattgcaaagaagagaagtct
gcatggaatgattcgcaaaagaacaaacaggggtggggtgatggacaaaagtcaaaccaa
ggttggtccatttctgccagtgataactggggagaaacttccaggagtaaccattggggt
gaggctaataagaaatccagctcaggaggtagtgacagtgacaggtccatttctggttgg
aacgaacttggtaaaactagttcttttacatggggaaataatataaatccaaataattca
tcaggatgggatgaatcttctaaacctaattcttcccagggatggggagaccctccaaag
tgtaatcagtctctaggttggggagattcatcaaaaccagttagttctccagattggaac
aagcaacaagacattgttggatcatggggaattccaccagccaccggcaagcctcctggt
acaggctggctgggaggacctattccagctccaacaaaggaggaagaacccacaggctgg
gaggagccatccccagaatctatacgacgtaaaatggagattgacgatggaacttcagct
tggggagatccgagcaaatacaactacaaaaatgtgaacatgtggaataaaaacatccca
gacggcaacagccgctcagaccagcaagcacagatgcatcgtttgctgccatctgcaagt
gctgtctcaagcaaggaggcaagcagtggctctggctggggtgagccctggggggagcct
tctactccagccacgactgtggataatggaacttcagcctggggtaagcccatagacagt
ggtcccagctggggagaacccattactgcggcatccagcacatccacgtggggctccacc
tctgttggtccacaatcattaagcaaatctgggcccaaatctatgcaagatggctggtgt
ggtgatgatatgccattacctggaagtcgccccactggctgggaagaggaggaagatgta
gagattgggatgtggaacagtaactcatctcaagagcttaactcatctttaaattggcca
ccatataccaagaaaatgtcatcaaagggtctgagtggcaaaaaaaggagaagggaaagg
ggaatgatgaaaggtggaaacaaacaagaagacgcatggataaatccatttgttaaacag
ttttcaaatatcagtttttcgagagactcaccagaagaaaatgtacagagcaataagatg
gatctttctggaggaatgttacaagacaagcgaatggagatagataaacatagcctaaat
attggtgattacaatcgaacggtcgggaaaggtcctggctctcggcctcagatttccaaa
gagtcttccatggagcgcaatccttattttgataagaatggcaatcccagtatgtttggt
gttggaaacacagcagcacaaccccggggcatgcagcagcctccagcacaacctctcagt
tcatctcagcctaatctccgtgctcaagtgcctcctccattactctcccctcaggttcca
gtttcattgctgaagtatgcaccaaacaacggtggcctgaacccgctctttggccctcaa
caggtagccatgctgaaccagctatcccaactaaaccagctttctcagatctcccagtta
cagcgattgttagcgcagcagcagagggtgcagaatcagagaagcgtgccttctgctaac
cgacagcagcaagaccagcagggtcgacctcttagtgtacagcagcagatgatgcaacag
tctcgtcaacttgatccaagcctgctggtgaagcagcagactccgccttctcagcagccg
ctccatcagccagccatgaagtccttccttgacaatgtcatgccccacactacacccgag
ctgcagaaagggccatcgccagtaaatgctttcagcaactttcctataggcttgaactca
aacttgaatgtaaatatggatatgaacagtattaaagaaccacagtcaagactaaggaag
tggactacagtggacagcatttctgtgaacacatctttggatcaaaactccagcaaacat
ggtgctatttcaagtggttttaggctggaagaatctccatttgttccctatgactttatg
aatagcagtacttcaccagccagtcctccaggttcaataggagatggctggccacgtgcc
aaatcgcctaatggctctagcagtgttaactggccaccagaatttcgccctggtgaacca
tggaaaggttatccaaacattgaccctgaaactgacccttacgtcactcctggcagtgtc
ataaacagtctttcgattaatactgtgcgggaagttgatcacctcagggacaggaacagt
gggtcatcctcatccttgaacaccacgctgccttcaactagtgcctggtcatccattcgt
gcctccaactacaatgttcccctcagcagtacagcacaaagcacttcagccagaaatagt
gattccaaattgacgtggtctcctggttcagttacaaacacctctctggctcatgagctg
tggaaagtccctttgccacctaaaaacatcactgctccgtcccgcccacctccggggctg
actggtcagaagccacccttgtctacgtgggataattccccccttcgtgtaggtggagga
tggggaaattctgatgccagatataccccaggttccagctggggtgagagcagctcaggg
agaataacgaattggcttgttttgaaaaacctcacacctcagattgatggctcaactctg
cgcaccctgtgcatgcagcatggtccactgattacattccatctgaaccttcaacatgga
aatgctctggtccgttacagttcaaaagaagaggtagtgaaggcacaaaagtctctgcac
atgtgtgtgctggggaacactactattctcgctgagtttgccagtgaagaggagatcagt
cgcttctttgcacaaagtcagtctctgaccccttctcctggctggcagtctctcgggtcc
agccagagccggctgggctccctcgactgttcccactcattctccagccggaccgatctc
aatcactggaatggtgctgggctgtcgggaactaactgtggagaccttcacggcacttcc
ctctgggggaccccacattattccacaagcctgtggggtcccccaagcagcagcgacccc
cggggaattagcagcccatcccccattaatgcttttctttctgttgaccacctgggtggg
ggtggagagtccatgtaa
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integrated database retrieval system
