Alexandromys fortis (reed vole): 126502462
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Entry
126502462 CDS
T08493
Name
(RefSeq) splicing factor 3B subunit 3
KO
K12830
splicing factor 3B subunit 3
Organism
mfot
Alexandromys fortis (reed vole)
Pathway
mfot03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
mfot00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
126502462
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mfot03021
]
126502462
03041 Spliceosome [BR:
mfot03041
]
126502462
03036 Chromosome and associated proteins [BR:
mfot03036
]
126502462
Transcription machinery [BR:
mfot03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
SAGA/TFTC/STAGA complex
126502462
Spliceosome [BR:
mfot03041
]
Complex A
U2 snRNP components
U2 snRNP specific factors
126502462
Complex B
126502462
Complex C
U2 SnRNP specific factors
126502462
Chromosome and associated proteins [BR:
mfot03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
STAGA complex
126502462
TFTC complex
126502462
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_RSE1_1st
CPSF_A
Beta-prop_RSE1_2nd
Beta-prop_BBS7
Motif
Other DBs
NCBI-GeneID:
126502462
NCBI-ProteinID:
XP_049999400
LinkDB
All DBs
Position
Unknown
AA seq
1172 aa
AA seq
DB search
MFLYNLTLQRATGISFAIHGNFSGTKQQEIVVSRGKILELLRPDPNTGKVHTLLTVEVFG
VIRSLMAFRLTGGTKDYIVVGSDSGRIVILEYQPSKNMFEKIHQETFGKSGCRRIVPGQF
LAVDPKGRAVMISAIEKQKLVYILNRDAAARLTISSPLEAHKANTLVYHVVGVDVGFENP
MFACLEMDYEEADNDPTGEAAANTQQTLTFYELDLGLNHVVRKYSEPLEEHGNFLITVPG
GSDGPSGVLICSENYITYKNFGDQPDIRCPIPRRRNDLDDPERGMIFVCSATHKTKSMFF
FLAQTEQGDIFKITLETDEDMVTEIRLKYFDTVPVAAAMCVLKTGFLFVASEFGNHYLYQ
IAHLGDDDEEPEFSSAMPLEEGDTFFFQPRPLKNLVLVDELDSLSPILFCQIADLANEDT
PQLYVACGRGPRSSLRVLRHGLEVSEMAVSELPGNPNAVWTVRRHIEDEFDAYIIVSFVN
ATLVLSIGETVEEVTDSGFLGTTPTLSCSLLGDDALVQVYPDGIRHIRADKRVNEWKTPG
KKTIVKCAVNQRQVVIALTGGELVYFEMDPSGQLNEYTERKEMSADVVCMSLANVPPGEQ
RSRFLAVGLVDNTVRIISLDPSDCLNGVLLRTVLDPVTGDLSDTRTRYLGSRPVKLFRVR
MQGQEAVLAMSSRSWLSYSYQSRFHLTPLSYETLEFASGFASEQCPEGIVAISTNTLRIL
ALEKLGAVFNQVAFPLQYTPRKFVIHPESNNLIIIETDHNAYTEATKAQRKQQMAEEMVE
AAGEDERELAAEMAAAFLNENLPESIFGAPKAGNGQWASVIRVMNPIQGNTLDLVQLEQN
EAAFSVAVCRFSNTGEDWYVLVGVAKDLILSPRSVAGGFVYTYKLVNNGEKLEFLHKTPV
EEVPAAIAPFQGRVLIGVGKLLRVYDLGKKKLLRKCENKHIANYISGIQTIGHRVIVSDV
QESFIWVRYKRNENQLIIFADDTYPRWVTTASLLDYDTVAGADKFGNICVVRLPPNTNDE
VDEDPTGNKALWDRGLLNGASQKAEVIMNYHVGETVLSLQKTTLIPGGSESLVYTTLSGG
IGILVPFTSHEDHDFFQHVEMHLRSEHPPLCGRDHLSFRSYYFPVKNVIDGDLCEQFNSM
EPNKQKNVSEELDRTPPEVSKKLEDIRTRYAF
NT seq
3519 nt
NT seq
+upstream
nt +downstream
nt
atgtttctgtacaacttgaccttacagcgggccactggcatcagttttgccatccatggc
aacttctctggaaccaaacaacaggaaattgttgtttctcgtgggaagattttggagtta
cttcgcccagaccctaataccgggaaagtacataccctcctcactgtggaagtatttggt
gttattcggtcacttatggcctttaggctaacaggtggcactaaagactacattgtagtt
ggtagtgactcgggtcgaattgttatcttggaataccagccatctaagaatatgtttgag
aaaattcaccaagaaacttttggcaaaagtggatgtcgccgtattgttcctggccagttc
ttagctgtggatcccaaagggagagctgttatgattagtgcaattgagaagcaaaaattg
gtatatatcttgaacagagatgctgcagctcgacttaccatttcatctcccctggaggcc
cacaaagcgaacactctagtatatcatgtggttggagtagatgtgggttttgaaaatcct
atgtttgcttgtttggaaatggattatgaggaagcagacaatgatccaacaggagaagca
gcagctaacactcagcagacactcactttttatgaattagaccttggtttaaatcatgtg
gttcgaaaatacagtgaacccttggaggaacatggcaacttccttattacagttcctgga
gggtcagatggtccaagtggggtgctgatctgttctgaaaattatatcacctataagaac
tttggtgaccaaccagatatccgatgtccaattcctaggagacggaatgacctggatgac
cctgaaagaggaatgatttttgtgtgctctgctacccataagaccaagtccatgttcttc
tttttggcccaaacggagcagggagatatctttaagattactttggagacagatgaagat
atggtaactgagatccgcctgaagtattttgatactgtgcctgttgctgctgctatgtgt
gtgcttaaaacaggctttctttttgtggcatcagaatttggaaatcattatttatatcaa
attgcccatcttggagatgatgatgaagaacctgaattttcatctgccatgccactagaa
gaaggagacacattcttctttcagccaagaccactcaaaaaccttgtgctggttgatgaa
ttggacagcctctctcccattctgttttgccagatagctgatctggccaatgaagacact
cctcagctgtatgtggcctgtggtaggggaccccggtcatctctgagagtcttaaggcat
ggacttgaggtgtcggaaatggctgtttctgagctccctggtaaccccaatgctgtctgg
acagtacgtcggcacattgaagatgagtttgatgcctatatcattgtatctttcgtaaat
gccacgcttgtgctatctatcggggagactgtggaagaagtgactgactctgggttcttg
ggaaccactccaaccttgtcttgctccttattaggagacgatgcattggtccaggtgtat
ccagatggcattcgacacataagagcagataagagagtcaatgagtggaagacccctggc
aagaaaacaatcgtgaagtgtgcagtgaaccagcggcaagtggtgatcgccctgactgga
ggagaacttgtctatttcgagatggatccttcaggacaattgaacgagtacacagaacgg
aaggagatgtcagcagatgtggtgtgcatgagtctggccaacgtacctccaggagaacag
cgatctcgattcctggctgtgggattggtggacaacactgtcagaatcatatcccttgac
ccatcagactgtttaaatggtgtgctgctgagaactgtcctagacccagtcactggggac
ttgtctgacactcgaactaggtacctggggtcccgtcctgtgaaactcttccgagtccga
atgcaaggacaggaggctgttttggccatgtctagccgctcatggctgagctactcctac
cagtcccgtttccatctcacccctctctcttacgagactctggagtttgcatctggcttc
gcctctgagcagtgtcctgaaggcattgttgccatttccaccaacactttgaggattttg
gcattggagaaacttggtgctgtcttcaatcaagtagcctttccactgcagtacacaccc
aggaaatttgtcattcaccctgagagtaacaaccttatcatcattgagacagatcacaat
gcctacactgaggctacaaaagctcagagaaagcagcagatggcagaggaaatggtggaa
gcagcaggagaggatgagcgggagctggctgcagaaatggcagcagcattcctcaatgaa
aacctccctgaatctatttttggagctcccaaggctggcaatgggcagtgggcctctgtg
attcgtgtgatgaaccctatccaggggaatacgctagaccttgtccagctggaacagaat
gaggcagccttcagtgtggcagtgtgtagattctccaacactggtgaagactggtatgtg
ctagtgggtgtggccaaggatttgatattgagccctcgctctgtggcagggggctttgtc
tatacatacaagcttgtgaacaatggagaaaagttggagtttttacacaagactccagtg
gaagaagttcctgctgccattgccccattccagggcagggtgttgattggtgtggggaag
cttttacgagtctatgatctggggaaaaagaagttacttcgaaagtgtgaaaataagcat
attgccaattatatatctgggatccagactattgggcacagggtaattgtgtctgatgtt
caagaaagtttcatctgggttcgctacaaacgtaacgagaaccagctcattatctttgct
gatgacacctaccccagatgggtcactaccgccagccttctagactatgacacggtggct
ggggcagacaagtttggcaacatttgtgtggtgaggcttccacctaacaccaacgatgag
gttgatgaagatcccaccggaaacaaagccctgtgggaccggggcttgctcaatggggct
tcacagaaggcagaggtcatcatgaactatcatgtcggtgagacggtgctgtcattgcag
aagaccacactgattcctggaggctcagaatcgctggtctataccacattgtctggaggg
attggcatccttgtccctttcacatctcatgaggaccacgacttcttccagcatgttgag
atgcacctgcgatctgagcatccccctctttgtggacgggatcacctcagctttcgttct
tattatttccctgttaagaatgtgattgatggagatctttgtgagcagttcaactccatg
gagcccaacaagcagaagaatgtctctgaagagctggaccgaaccccacctgaagtgtcc
aagaagcttgaggatattcggacccgttatgctttctga
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integrated database retrieval system