KEGG   Alexandromys fortis (reed vole): 126502462
Entry
126502462         CDS       T08493                                 
Name
(RefSeq) splicing factor 3B subunit 3
  KO
K12830  splicing factor 3B subunit 3
Organism
mfot  Alexandromys fortis (reed vole)
Pathway
mfot03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:mfot00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    126502462
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:mfot03021]
    126502462
   03041 Spliceosome [BR:mfot03041]
    126502462
   03036 Chromosome and associated proteins [BR:mfot03036]
    126502462
Transcription machinery [BR:mfot03021]
 Eukaryotic type
  RNA polymerase II system
   Coactivators
    SAGA/TFTC/STAGA complex
     126502462
Spliceosome [BR:mfot03041]
 Complex A
  U2 snRNP components
   U2 snRNP specific factors
    126502462
 Complex B
    126502462
 Complex C
   U2 SnRNP specific factors
    126502462
Chromosome and associated proteins [BR:mfot03036]
 Eukaryotic type
  Histone modification proteins
   HAT complexes
    STAGA complex
     126502462
    TFTC complex
     126502462
SSDB
Motif
Pfam: Beta-prop_RSE1_1st CPSF_A Beta-prop_RSE1_2nd Beta-prop_BBS7
Other DBs
NCBI-GeneID: 126502462
NCBI-ProteinID: XP_049999400
LinkDB
Position
Unknown
AA seq 1172 aa
MFLYNLTLQRATGISFAIHGNFSGTKQQEIVVSRGKILELLRPDPNTGKVHTLLTVEVFG
VIRSLMAFRLTGGTKDYIVVGSDSGRIVILEYQPSKNMFEKIHQETFGKSGCRRIVPGQF
LAVDPKGRAVMISAIEKQKLVYILNRDAAARLTISSPLEAHKANTLVYHVVGVDVGFENP
MFACLEMDYEEADNDPTGEAAANTQQTLTFYELDLGLNHVVRKYSEPLEEHGNFLITVPG
GSDGPSGVLICSENYITYKNFGDQPDIRCPIPRRRNDLDDPERGMIFVCSATHKTKSMFF
FLAQTEQGDIFKITLETDEDMVTEIRLKYFDTVPVAAAMCVLKTGFLFVASEFGNHYLYQ
IAHLGDDDEEPEFSSAMPLEEGDTFFFQPRPLKNLVLVDELDSLSPILFCQIADLANEDT
PQLYVACGRGPRSSLRVLRHGLEVSEMAVSELPGNPNAVWTVRRHIEDEFDAYIIVSFVN
ATLVLSIGETVEEVTDSGFLGTTPTLSCSLLGDDALVQVYPDGIRHIRADKRVNEWKTPG
KKTIVKCAVNQRQVVIALTGGELVYFEMDPSGQLNEYTERKEMSADVVCMSLANVPPGEQ
RSRFLAVGLVDNTVRIISLDPSDCLNGVLLRTVLDPVTGDLSDTRTRYLGSRPVKLFRVR
MQGQEAVLAMSSRSWLSYSYQSRFHLTPLSYETLEFASGFASEQCPEGIVAISTNTLRIL
ALEKLGAVFNQVAFPLQYTPRKFVIHPESNNLIIIETDHNAYTEATKAQRKQQMAEEMVE
AAGEDERELAAEMAAAFLNENLPESIFGAPKAGNGQWASVIRVMNPIQGNTLDLVQLEQN
EAAFSVAVCRFSNTGEDWYVLVGVAKDLILSPRSVAGGFVYTYKLVNNGEKLEFLHKTPV
EEVPAAIAPFQGRVLIGVGKLLRVYDLGKKKLLRKCENKHIANYISGIQTIGHRVIVSDV
QESFIWVRYKRNENQLIIFADDTYPRWVTTASLLDYDTVAGADKFGNICVVRLPPNTNDE
VDEDPTGNKALWDRGLLNGASQKAEVIMNYHVGETVLSLQKTTLIPGGSESLVYTTLSGG
IGILVPFTSHEDHDFFQHVEMHLRSEHPPLCGRDHLSFRSYYFPVKNVIDGDLCEQFNSM
EPNKQKNVSEELDRTPPEVSKKLEDIRTRYAF
NT seq 3519 nt   +upstreamnt  +downstreamnt
atgtttctgtacaacttgaccttacagcgggccactggcatcagttttgccatccatggc
aacttctctggaaccaaacaacaggaaattgttgtttctcgtgggaagattttggagtta
cttcgcccagaccctaataccgggaaagtacataccctcctcactgtggaagtatttggt
gttattcggtcacttatggcctttaggctaacaggtggcactaaagactacattgtagtt
ggtagtgactcgggtcgaattgttatcttggaataccagccatctaagaatatgtttgag
aaaattcaccaagaaacttttggcaaaagtggatgtcgccgtattgttcctggccagttc
ttagctgtggatcccaaagggagagctgttatgattagtgcaattgagaagcaaaaattg
gtatatatcttgaacagagatgctgcagctcgacttaccatttcatctcccctggaggcc
cacaaagcgaacactctagtatatcatgtggttggagtagatgtgggttttgaaaatcct
atgtttgcttgtttggaaatggattatgaggaagcagacaatgatccaacaggagaagca
gcagctaacactcagcagacactcactttttatgaattagaccttggtttaaatcatgtg
gttcgaaaatacagtgaacccttggaggaacatggcaacttccttattacagttcctgga
gggtcagatggtccaagtggggtgctgatctgttctgaaaattatatcacctataagaac
tttggtgaccaaccagatatccgatgtccaattcctaggagacggaatgacctggatgac
cctgaaagaggaatgatttttgtgtgctctgctacccataagaccaagtccatgttcttc
tttttggcccaaacggagcagggagatatctttaagattactttggagacagatgaagat
atggtaactgagatccgcctgaagtattttgatactgtgcctgttgctgctgctatgtgt
gtgcttaaaacaggctttctttttgtggcatcagaatttggaaatcattatttatatcaa
attgcccatcttggagatgatgatgaagaacctgaattttcatctgccatgccactagaa
gaaggagacacattcttctttcagccaagaccactcaaaaaccttgtgctggttgatgaa
ttggacagcctctctcccattctgttttgccagatagctgatctggccaatgaagacact
cctcagctgtatgtggcctgtggtaggggaccccggtcatctctgagagtcttaaggcat
ggacttgaggtgtcggaaatggctgtttctgagctccctggtaaccccaatgctgtctgg
acagtacgtcggcacattgaagatgagtttgatgcctatatcattgtatctttcgtaaat
gccacgcttgtgctatctatcggggagactgtggaagaagtgactgactctgggttcttg
ggaaccactccaaccttgtcttgctccttattaggagacgatgcattggtccaggtgtat
ccagatggcattcgacacataagagcagataagagagtcaatgagtggaagacccctggc
aagaaaacaatcgtgaagtgtgcagtgaaccagcggcaagtggtgatcgccctgactgga
ggagaacttgtctatttcgagatggatccttcaggacaattgaacgagtacacagaacgg
aaggagatgtcagcagatgtggtgtgcatgagtctggccaacgtacctccaggagaacag
cgatctcgattcctggctgtgggattggtggacaacactgtcagaatcatatcccttgac
ccatcagactgtttaaatggtgtgctgctgagaactgtcctagacccagtcactggggac
ttgtctgacactcgaactaggtacctggggtcccgtcctgtgaaactcttccgagtccga
atgcaaggacaggaggctgttttggccatgtctagccgctcatggctgagctactcctac
cagtcccgtttccatctcacccctctctcttacgagactctggagtttgcatctggcttc
gcctctgagcagtgtcctgaaggcattgttgccatttccaccaacactttgaggattttg
gcattggagaaacttggtgctgtcttcaatcaagtagcctttccactgcagtacacaccc
aggaaatttgtcattcaccctgagagtaacaaccttatcatcattgagacagatcacaat
gcctacactgaggctacaaaagctcagagaaagcagcagatggcagaggaaatggtggaa
gcagcaggagaggatgagcgggagctggctgcagaaatggcagcagcattcctcaatgaa
aacctccctgaatctatttttggagctcccaaggctggcaatgggcagtgggcctctgtg
attcgtgtgatgaaccctatccaggggaatacgctagaccttgtccagctggaacagaat
gaggcagccttcagtgtggcagtgtgtagattctccaacactggtgaagactggtatgtg
ctagtgggtgtggccaaggatttgatattgagccctcgctctgtggcagggggctttgtc
tatacatacaagcttgtgaacaatggagaaaagttggagtttttacacaagactccagtg
gaagaagttcctgctgccattgccccattccagggcagggtgttgattggtgtggggaag
cttttacgagtctatgatctggggaaaaagaagttacttcgaaagtgtgaaaataagcat
attgccaattatatatctgggatccagactattgggcacagggtaattgtgtctgatgtt
caagaaagtttcatctgggttcgctacaaacgtaacgagaaccagctcattatctttgct
gatgacacctaccccagatgggtcactaccgccagccttctagactatgacacggtggct
ggggcagacaagtttggcaacatttgtgtggtgaggcttccacctaacaccaacgatgag
gttgatgaagatcccaccggaaacaaagccctgtgggaccggggcttgctcaatggggct
tcacagaaggcagaggtcatcatgaactatcatgtcggtgagacggtgctgtcattgcag
aagaccacactgattcctggaggctcagaatcgctggtctataccacattgtctggaggg
attggcatccttgtccctttcacatctcatgaggaccacgacttcttccagcatgttgag
atgcacctgcgatctgagcatccccctctttgtggacgggatcacctcagctttcgttct
tattatttccctgttaagaatgtgattgatggagatctttgtgagcagttcaactccatg
gagcccaacaagcagaagaatgtctctgaagagctggaccgaaccccacctgaagtgtcc
aagaagcttgaggatattcggacccgttatgctttctga

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