Alexandromys fortis (reed vole): 126502514
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Entry
126502514 CDS
T08493
Name
(RefSeq) nuclear pore complex protein Nup153 isoform X1
KO
K14296
nuclear pore complex protein Nup153
Organism
mfot
Alexandromys fortis (reed vole)
Pathway
mfot03013
Nucleocytoplasmic transport
mfot03250
Viral life cycle - HIV-1
mfot05014
Amyotrophic lateral sclerosis
Brite
KEGG Orthology (KO) [BR:
mfot00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
126502514
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
126502514
09160 Human Diseases
09164 Neurodegenerative disease
05014 Amyotrophic lateral sclerosis
126502514
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mfot03019
]
126502514
Messenger RNA biogenesis [BR:
mfot03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
126502514
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Nup153
Zn_ribbon_RanBP
Nup_retrotrp_bd
Motif
Other DBs
NCBI-GeneID:
126502514
NCBI-ProteinID:
XP_049999515
LinkDB
All DBs
Position
Unknown
AA seq
1456 aa
AA seq
DB search
MASGAGGIGGGGGGGKIRTRRCHQGPVKPYQQGRPQHQGILSRVTESVKNIVPGWLQRYF
NKNENACSCSTGAGEVPHWPEDREDERVIYAGEDNTNSDDGRITPEPAGSNTEEPSTTST
ASNYPDVLTRPSLHRSHLNFSMLESPALHCQPSTSSAFPIGSSGFSLVKEIKDSTSQHDD
DNISTTSGFSSRASDKDIAVSKSTSLPPLWSPEAERSHSLSHHTATSSKKPAFNLSAFGT
LSTSLGNSSVLKTSQLGDSPFYPGKTTYGGAAAAVRQNKVRNTPYQAPVRRQMKAKQLNA
QSYGVTSSTARRILQSLEKMSSPLADAKRIPSAVSSPLNSPLERSGIDSTAFQAKKEKVD
SQYPPVQRLMTPKPVSIATNRTIYFKPSLTPSGDLRKTNQRIDKKNSAVNEKNISRQNRE
QESGFSYPSFSIPAANGLSSGGGKMRRERTRFAASKPPEEEEVEVPVLPQISLPISSSSL
PVFSFSSPVTPASSLSPVSSSQSLPNKAQTSLGSTGSPVFTFSSPIVKSTQADVLPPASI
GFTFSVPVAKTELSCFNSSSEPILSSSAQDNTVVNSSNYKKRSATCEDPFKPAKILKEGS
VLDILKTPGFLSPKVDSPAVQPTTTSPVVYTRPAISTFSSSGIEFGESLKAGSSWQCDTC
LLQNKVTDNKCVACQAAKLSPKETAKQAGIGTPSKSDKPASTSGTGFEDKFKPAVGTWDC
DTCLVQNKPEAVKCVACETPKPGTGVKRVLTLAVSSESPVTASSSSCTVSTGTLGFEFKR
PVGSWECPVCCVCNKAEDNKCVSCMSEKPGSVSASNSSPASDSLSSGGCLGLDKFKKPEG
SWDCEVCLVQNKADSTKCIACESAKPGTKAEFKGFGTSSSSLNPAPSAFKFGIPSSSSGL
SQTFTSTGNFKFGDQGGFKLGTSSDSGSTNSMNTNFKFSKPAGDFKFGVSSDSKPEEIKN
DSKNDHFKFGLTSGLSNPASSAPFQFGVSTLGQQEKKEELPKSSSAGFSFGAGVSNPPTA
ATDTTVTSDNKSGFNFGPIETKGVSVTPFTYKTTEAKKEDSSVTKGGFTFGKVESASMFV
LGRTEEKQQEPVTSTSLVFGKKADNEEPKCQPVFSFGNSEQTKDESSSKPTFSFSVAKPS
VKESEQLAKPTFSFGNQTSTTTDQGVAKPVFSFLNSSSSSSIAPATSSSGGIFGSSTSSS
NPPVAAFVFGQASNPVSSSAFGNSTESSTSQSLLFPQDSKPATTSSTGSAAPPFVFGSGG
SSNSTASSGFSFGATTSSSSGSSFVFGTGHSAPSASPAFGASQTPTFGQSQGASQPNPPS
FGSISSSTSLFSAGSQPAAPPTFGAVSSSSQPPVFGQQPSQSAFGSGTAPNSSSVFQFGS
STTNFNFTNNNPSGVFTFGANPSTPAASAQPSGSGGFPFSQSPASFTLGSNGKNMFSSSG
TSVSGRKIKTAVRRRK
NT seq
4371 nt
NT seq
+upstream
nt +downstream
nt
atggcctccggagccggaggcatcggagggggcggcggcggcggcaagatccggacgcgt
cgttgccaccaggggccggtgaagccttaccagcaggggcgaccccagcatcagggcatt
cttagcagggttacagagtctgttaagaatattgttccagggtggctacaaagatacttc
aacaagaacgaaaatgcatgtagctgttcaacaggtgcaggtgaagttccacactggccg
gaagatagggaagatgagcgggtaatttatgctggtgaggacaacacaaacagtgatgat
gggagaatcactcctgagccagcaggcagtaacacagaagaaccttcgacaaccagtact
gcctcaaattatccagatgtgttaacaaggccttctcttcatcggagccatctgaatttc
tccatgttggaatctcctgcgttgcattgtcagccttccacgtcctctgcattcccaatt
ggcagttctggattttccctcgtcaaagaaattaaagattctacctctcagcatgatgat
gataacatctcaactaccagtggtttttcttcaagagcttctgataaagatatagctgtt
tcaaagagtacttccctgccaccgctgtggtcccctgaagcagagcgttctcattcactc
tcacatcatactgccaccagctccaaaaaaccagcattcaacttgtctgcctttggaaca
ctttccacctcacttgggaattcttcagttcttaaaacaagtcagcttggagactctcct
ttctatcctggcaaaacaacatacggtggggcagctgccgctgtaagacagaacaaagtg
cgaaatacgccttaccaggcaccagttagaagacagatgaaagctaagcagctcaatgca
cagtcctacggtgtgaccagctcaacagcacggcggatattgcagtcattagagaaaatg
tcaagccctcttgcggatgcgaaaagaattccatctgctgtttcttctcctttgaattct
cctcttgaaaggagtgggatagacagcacagcttttcaggccaaaaaagaaaaggtggac
tctcagtatccccctgttcagagactaatgaccccaaagccagtttccatagcaacaaat
agaactatctattttaaaccatctctgaccccatctggtgacttaaggaagactaatcaa
aggatagataaaaagaacagtgctgtaaatgaaaaaaatatttcaagacaaaatagagag
caagaaagtggcttttcatatcccagtttcagtattcctgcagccaacggtttatcttct
ggaggtggcaagatgagaagagagagaacacgctttgctgcttctaaacctccagaggag
gaggaagtggaagtaccagtgttaccgcagatctctctaccaatcagcagctcctcactg
cctgtcttcagttttagttcccctgtgacccctgcttcctcattgtcaccagtcagttct
tctcagtccttaccaaacaaggcacagacgtctctgggcagcactggcagtcctgtgttc
acattttcatctcccattgtaaagtctacgcaggcagacgtgctacctccagcgtctatt
ggatttacatttagtgtgcctgttgcaaaaacagaactttcttgttttaatagttcttca
gaaccaattttaagtagttcagctcaagataacactgtagtgaatagttcaaactataag
aagcgaagtgccacttgtgaggacccttttaaacctgcaaagattctgaaagaaggaagt
gttctagacattctgaagacccctggttttttatcaccaaaggttgattctcctgctgtt
cagcccaccactacaagcccagtggtttatacaagaccagccataagtactttttcttct
agtggaattgagtttggagaaagtttaaaagctggatcatcatggcagtgtgacacatgt
ctcctccagaacaaagtcacagacaataagtgtgtagcctgtcaagcagctaaactgtca
ccgaaagaaactgctaaacaggctggaattgggacaccaagcaaaagtgacaaaccagct
tctacatcagggacaggctttgaagataagtttaaaccagcagtaggaacttgggattgt
gatacctgtttagtacaaaataagcctgaagccgtaaaatgtgtagcttgtgaaacaccc
aaacctggcactggtgtgaagcgagtcctcacgttggcggtgtcttcagaaagtcctgtg
actgcttcctcttctagctgcactgtgagcactggtacgctaggatttgaattcaaaagg
cctgtgggatcttgggaatgtccagtatgctgtgtttgtaataaggccgaagacaataaa
tgtgtctcctgtatgtctgagaaaccaggttcggtatctgcctcaaacagcagccctgcc
tctgactctctgtcttctggaggctgtctaggattggataagttcaaaaaacctgagggc
agctgggactgtgaagtgtgcttagtgcaaaataaagcggactctaccaagtgcatagca
tgtgaaagtgcaaagccaggcacaaaggcagagtttaaaggctttgggacatcttcttca
tctttaaatccagcaccctcagccttcaaatttggtatcccatcatcctcttctggactt
tctcaaacttttacaagcactggaaattttaaatttggagatcaaggaggattcaaatta
ggcacttcatcagactctgggtctacaaactccatgaatacaaactttaagttttctaaa
ccagctggagattttaaatttggagtgtcttctgattccaaacctgaagaaattaaaaat
gacagcaagaatgatcattttaagtttggactgacttctggcttaagcaacccagcttct
tcagctccatttcagtttggggtatctactcttgggcagcaagaaaagaaagaggagctc
ccaaagtcttcatctgcaggctttagctttggtgcaggtgttagtaaccctcccactgct
gctactgacaccacagtgacctcagataacaagagtggcttcaattttggacccatagaa
actaagggtgtctcagtgacccctttcacatacaagacaacagaagcaaagaaagaagat
tcttctgtcaccaagggtgggttcacttttggtaaagtagagtctgcctcaatgtttgtt
ttgggaaggacagaggagaaacagcaagaacctgttacttctacttctctggtatttgga
aagaaagctgacaatgaggagccaaagtgtcaaccagtattttcctttggaaattcggag
caaaccaaagatgagagttcttccaagccaacatttagtttcagtgtggcaaaaccatct
gtgaaagagtcggagcagctagccaagcccacgttttcgtttggaaatcaaaccagtact
acaactgatcaaggggtagcaaagccagtgtttagcttcttgaatagcagttcctctagt
tccatcgcaccagccacttcatccagtggtggcatatttggtagttccacctcttcctcc
aaccctcctgtggcagcctttgtgtttggacaggccagcaatcctgtcagcagctctgcc
ttcggtaactctacagagtccagtacatctcagtctttgttatttcctcaagatagcaag
ccagctaccacatccagcactggctcagctgcccctccatttgtgtttggatcaggaggc
agcagtaacagtactgcatcttccgggttcagttttggagctaccacatcaagctcttca
ggatcctcctttgtatttggcactggacattcagcaccatctgccagtccagcatttggt
gctagccagaccccaacgtttggacaaagtcaaggtgccagccaaccgaaccctccaagc
tttggctctatatcgtcttcaacatcgttgttttctgctggttcccagcctgcagcacca
cctacttttggggcagtgtcaagcagcagccaacctcctgtgtttgggcagcagcctagt
cagtctgcatttggctctgggacagctcccaattccagttctgttttccaatttggcagc
agcactacaaatttcaacttcacaaacaataatccatcaggagtgttcacatttggtgca
aatcccagcacgcctgcagcctcagcccagccctcaggttcagggggcttcccattcagc
cagtctccagcgtcatttacattggggtcaaatgggaaaaatatgttctcttcttccgga
acttcagtttctggtcgcaagataaagactgctgttagacgcaggaaataa
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