Alexandromys fortis (reed vole): 126502520
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Entry
126502520 CDS
T08493
Name
(RefSeq) katanin p80 WD40 repeat-containing subunit B1 isoform X1
KO
K18643
katanin p80 WD40 repeat-containing subunit B1
Organism
mfot
Alexandromys fortis (reed vole)
Brite
KEGG Orthology (KO) [BR:
mfot00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
mfot04812
]
126502520
Cytoskeleton proteins [BR:
mfot04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Microtubule severing proteins
126502520
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40
Katanin_con80
WD40_Prp19
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_EML_2
Beta-prop_WDR90_POC16_2nd
WDR55
EIF3I
Beta-prop_TEP1_2nd
Beta-prop_CAF1B_HIR1
WD40_MABP1-WDR62_2nd
ANAPC4_WD40
Beta-prop_EML
Beta-prop_SCAP
Beta-prop_DCAF4
Beta-prop_WDR75_1st
Beta-prop_TEP1_C
WD40_MABP1-WDR62_1st
NBCH_WD40
Beta-prop_SPT8
Beta-prop_EIPR1
Beta-prop_IFT122_1st
WDR90_beta-prop_4th
Beta-prop_Vps41
Beta-prop_IFT140_1st
Beta-prop_HPS5
WD40_RFWD3
Beta-prop_RIG_1st
Beta-prop_WDR19_1st
RMC1_N
WDR54
eIF2A
Beta-prop_IP5PC_F
PROPPIN
Beta-prop_LRRK2
Beta-prop_NWD2_C
VPS8_N
Beta-prop_WDR35_TULP_N
Beta-prop_VPS8
Ge1_WD40
Motif
Other DBs
NCBI-GeneID:
126502520
NCBI-ProteinID:
XP_049999533
LinkDB
All DBs
Position
Unknown
AA seq
655 aa
AA seq
DB search
MATPVVTKTAWKLQEIVAHASNVSSLVLGKASGRLLATGGDDCRVNLWSINKPNCIMSLT
GHTSPVESVRLNTPEELIVAGSQSGSIRVWDLEAAKILRTLMGHKANICSLDFHPYGEFV
ASGSQDTNIKLWDIRRKGCVFRYRGHSQAVRCLRFSPDGKWLASAADDHTVKLWDLTAGK
MMSEFPGHTGPVNVVEFHPNEYLLASGSSDRTIRFWDLEKFQVVSCIEGEPGPVRSVLFN
PDGCCLYSGCQDSLRVYGWEPERCFDVVLVNWGKVADLAICNDQLIGVAFSQSNVSSYVV
DLTRVTRTGTVTQDPVQASQPLTQQTSNPGVSLRRIYERPSTTCSKPQRVKHNSESERRS
PSSEDDRDERESRAEIQNAEDYNEIFQPKNSISRTPPRKSEPFPAPPEDDTATAKEASKP
SPAMDVQLPVPNLEVSARPPVLTSTPAPKGEPAIIPATRNEPIGLKASDFLPAVKVPQQA
ELVDEDAMSQIRKGHDTMCVVLTSRHKNLDTVRAVWSTGDIKTSVDSAVAINDLSVVVDL
LNIVNQKASLWKLDLCTTVLPQIEKLLQSKYESYVQTGCTSLKLILQRFLPLITDILAAP
PSVGVDISREERLHKCRLCFKQLKSISGLVKSKSGLSGRHGSAFRELHLLMASLD
NT seq
1968 nt
NT seq
+upstream
nt +downstream
nt
atggccacccctgtggtcaccaagactgcctggaagttgcaagagatagtggcccatgcc
agcaatgtgtcctcgttggtgctgggcaaggcctcagggcggctgctggccactggtgga
gatgactgccgtgtcaacctgtggtcgatcaacaagcccaactgcatcatgagcctgaca
ggtcatacatcccctgtggagagtgtccgcctcaacactcctgaggagctcatcgtagcc
ggttcccagtcgggctccattcgtgtctgggacctggaagctgccaaaattctccgcaca
ctcatggggcacaaagccaacatctgcagcctggatttccacccctatggcgaatttgtg
gcctcaggttcccaggacacaaatatcaagctctgggacatcaggaggaaaggctgtgtc
ttccgatatagggggcacagccaggctgtgcggtgtctccggttcagccctgatgggaag
tggttggcctcggcagcagatgaccacacagtgaagctctgggatctgacagctggcaag
atgatgtctgagttccctggtcacacagggcctgtgaacgtggtggagtttcaccccaat
gagtatctcctagcttctggcagctctgacaggacaatccgcttctgggacctggagaag
tttcaggtggtgagctgcattgaaggggagccagggcctgtcaggagtgtcctcttcaac
cccgacggctgctgcttgtacagtggctgccaggactcgctgcgcgtctacggttgggag
cctgagcgctgctttgatgtggtccttgtcaattggggcaaggtggctgatctggccatc
tgtaatgaccagctgataggtgtggccttctcccagagcaatgtctcctcttacgtggtg
gacctgacgagagtcaccaggacaggcactgtgacccaggaccctgtgcaggcaagccag
cctctgacacagcagacctccaaccctggtgtctccctccgccgcatctatgagcggccc
agcacaacctgcagcaagcctcagagggtaaaacacaactcggagagtgagcggcgcagc
cccagcagcgaagatgacagggacgagcgtgagtccagggccgagatccagaacgctgag
gactacaatgagatcttccagcccaagaacagcatcagtcggacaccgcctcggaaaagt
gagcccttcccagcacccccagaagatgacacagccacagcaaaggaggcctcgaaacct
agcccagccatggatgtgcagctgccggtgccaaatctcgaggtctcagcccgacctcca
gtcttgacttccactcctgcacccaagggcgagcctgccatcatccctgccacacggaat
gagcccattggcctaaaggcctctgacttcctgcccgccgtgaaggtcccccagcaggcc
gagctggtggatgaggatgccatgtcacagatacggaaaggccacgacaccatgtgtgtg
gtacttaccagccgccacaagaacctggacactgtacgggcggtgtggagcacaggagat
atcaagacatcagtggactctgcagtggccatcaatgacctgtctgtggtggtagacctc
ctgaacattgtcaaccagaaagcctcgctgtggaagctggacctgtgtaccacagtgctg
ccacagattgagaagcttctgcagagcaagtacgagagctatgtccagaccgggtgcacc
tccctgaagctgatcctgcagcggttcctgcccctcatcactgacattttggcagccccg
ccttctgtgggtgtggacatcagccgggaagagaggctgcacaagtgccgactctgcttc
aaacaactcaagagcatcagtggccttgtcaagagcaagtcaggtctgagtggccgccat
ggcagtgccttccgtgagctgcacctactcatggccagtttggactga
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