KEGG   Alexandromys fortis (reed vole): 126502638
Entry
126502638         CDS       T08493                                 
Name
(RefSeq) vacuolar protein sorting-associated protein 4A
  KO
K12196  vacuolar protein-sorting-associated protein 4
Organism
mfot  Alexandromys fortis (reed vole)
Pathway
mfot03250  Viral life cycle - HIV-1
mfot03272  Virion - Hepatitis viruses
mfot04144  Endocytosis
mfot04217  Necroptosis
Brite
KEGG Orthology (KO) [BR:mfot00001]
 09120 Genetic Information Processing
  09125 Information processing in viruses
   03250 Viral life cycle - HIV-1
    126502638
   03272 Virion - Hepatitis viruses
    126502638
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    126502638
  09143 Cell growth and death
   04217 Necroptosis
    126502638
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:mfot04131]
    126502638
   03400 DNA repair and recombination proteins [BR:mfot03400]
    126502638
Membrane trafficking [BR:mfot04131]
 Endosome - Lysosome transport
  Endosomal sorting complexes required for transport (ESCRT)
   ESCRT-III complex
    126502638
DNA repair and recombination proteins [BR:mfot03400]
 Eukaryotic type
  Check point factors
   Other check point factors
    126502638
SSDB
Motif
Pfam: AAA Vps4_C MIT AAA_lid_3 TIP49 AAA_16 AAA_22 AAA_14 AAA_5 RuvB_N AAA_25 IstB_IS21 DUF815 AAA_17 AAA_2 AAA_18 NPHP3_N AAA_33 nSTAND3 RNA_helicase AAA_24 PhoH ResIII AAA_7 Mg_chelatase AAA_28 NACHT Parvo_NS1 bpMoxR YhdB AAA_30
Other DBs
NCBI-GeneID: 126502638
NCBI-ProteinID: XP_049999763
LinkDB
Position
Unknown
AA seq 437 aa
MTTSTLQKAIDLVTKATEEDKAKNYEEALRLYQHAVEYFLHAIKYEAHSDKAKESIRAKC
VQYLDRAEKLKDYLRNKEKHGKKPVKENQSEGKGSDSDSEGDNPEKKKLQEQLMGAVVME
KPNIRWNDVAGLEGAKEALKEAVILPIKFPHLFTGKRTPWRGILLFGPPGTGKSYLAKAV
ATEANNSTFFSVSSSDLMSKWLGESEKLVKNLFELARQHKPSIIFIDEVDSLCGSRNENE
SEAARRIKTEFLVQMQGVGNNNDGTLVLGATNIPWVLDSAIRRRFEKRIYIPLPEEAARA
QMFRLHLGSTPHNLTDANIHELARKTEGYSGADISIIVRDSLMQPVRKVQSATHFKKVCG
PSRTNPSVVIDDLLTPCSPGDQGAIEMTWMDVPGDKLLEPVVCMSDMLRSLATTRPTVNA
EDLLKVKKFSEDFGQES
NT seq 1314 nt   +upstreamnt  +downstreamnt
atgacaacgtcaaccctccagaaagccatcgatctggtgacgaaagccactgaagaggac
aaagccaagaactacgaggaggctctccggctctaccagcatgctgtggagtatttcctc
catgccatcaaatatgaagcacacagcgacaaggccaaggagagcattcgagcgaagtgc
gtgcagtacctagaccgagcagagaagctgaaagattatttacgaaacaaagagaaacat
ggcaagaagccagtcaaggagaatcagagtgagggcaagggtagcgacagtgacagtgaa
ggggataatccagagaaaaagaaattgcaagaacagttgatgggtgctgttgtgatggag
aagcccaacatacggtggaatgatgtggctggactcgagggagctaaagaggctctcaaa
gaagctgtcattttgccaattaaattcccacacctttttacaggcaagcgcaccccttgg
cgaggtatactgctctttgggcccccaggcacaggcaagtcctacctggccaaagccgtg
gcaacagaagccaacaactccaccttcttctctgtgtcctcctcggatctgatgtctaag
tggttgggggagagtgagaagctagtcaagaacctgtttgagttggcccggcaacacaag
ccttccatcatcttcatcgacgaggtggattccctctgcgggtcacggaatgaaaatgag
agcgaggctgcccgaaggatcaaaacggagttcttggtccagatgcagggagtggggaat
aacaatgatgggactcttgttctcggtgccacaaacatcccctgggtgttggattcagcc
attaggaggaggtttgagaagcgaatttatatcccattgccagaggaagcggcccgtgcc
cagatgtttcggttacatctgggaagcacacctcacaacctcacggatgctaacatccac
gagctggcccggaagacagaaggctactcaggagcagacatcagcatcatcgtgcgggac
tccctcatgcagccagttagaaaagtgcagtcagcaacacacttcaagaaggtttgtggc
ccttcccgcaccaaccctagtgttgtgattgatgatcttctgaccccatgttctccaggg
gaccaaggggccatagagatgacttggatggatgtccctggtgataaactcttagagcct
gtggtttgcatgtcagacatgctccggtctttagccaccacccggcccacagtgaatgca
gaagacctcctgaaagtgaagaaattctctgaggactttggacaggagagctaa

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