Alexandromys fortis (reed vole): 126502753 Help Entry 126502753         CDS       T08493                                  Name (RefSeq) protein NLRC5 isoform X1   KO K22615   NLR family CARD domain containing 5 Organism mfot  Alexandromys fortis (reed vole) Brite KEGG Orthology (KO) [BR:mfot00001]  09180 Brite Hierarchies   09183 Protein families: signaling and cellular processes    04054 Pattern recognition receptors [BR:mfot04054]     126502753 Pattern recognition receptors [BR:mfot04054]  Cytoplasmic pattern recognition receptors   NOD-like receptors    126502753 BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  NACHT Atypical_Card LRR_6 NLRC4_HD2 LRR_4 AAA_16 AAA NPHP3_N nSTAND3 AAA_22 ABC_tran AAA_33 Motif Other DBs NCBI-GeneID:  126502753 NCBI-ProteinID:  XP_049999938 LinkDB All DBs Position Unknown AA seq 1855 aa AA seqDB search MDSESLRLNTENLWTRLVSLLSKNSEWLSAKVRFYLPTVDLDGSKALDPESIDVQLRKLH TQSRATWESFIHSLCMELDVPLELEVPLLSIWGPKDELSKQLGAGEDSHPGPPLHHGVKR PFQSYGSSPRRKHCRKQQLELAEKYLKLLKTSAQQYHGGECPGARRTRASPQVYIPPILQ WSRGTAPLDVQEGATKEDPEATDDTDVSFQDLFNFKAPKGPRVTVLLGKAGMGKTTLARR LCWRWADGQLDRFRALFLFEFRRLNLITHSLTLPQLLFDQCLSPESNPDAVFQYLEENAH QVLLIFDGLDEILHASSTGADNRGSALALFSDLCRGTLLPGCWVLATSRPGKLPACVPTE AAMVYMWGFDGQRIEKYASHFFSDLLLQELALAEMRANERLRGMCAVPALCRVACFCLGR LLPGSPPGQSTALLPTVTQLFLQMVETFSPHGTLPATSLLGLGKVALSRLDIGKVIFSME KDISPSLMAFGAAHSLLTSFCIRTSPEHQEIGYAFAHLSLQEFFAALYLMASDTVDKETL TYYVTLNSHWVLRTKARLGLSDHLSTFLAGLASHNCRAFLCHLAQQEEAWVSSRQAAVVQ VLRKLASRKLTGPKMIELYHCVAETQELELAQFTAQNLPVQLSFHNLPLTRADLAALANI LEHRVAPIHLDFDGCPLEPQCPEALVGCGQVENLSFKSRKCGDAFAEALGRSLPTMGSLK ILGLTGSKITAQGIRHLVQALPLCFQLEEVSLHDNQLKDPEVMSLVELLPCLPKLQKLDL SRNSVSVSALLSAVKVAITCPTVRKLQVRESDFIFLLSPIAETAVQQSGASNLQDKDSLK EERQSLELRLQRCQLRVHDAETLVELLQKCPCLEEVDLSGNHLEDEGCRLVAEAASQLRI AQKLDLSDNGLSKTGVTYVLRAMKTCGTLKEMHISLLTNTVVLTFAQEPREQEGSCKTEA PLTSFAFSLTSEMSGSSRRIRLTQCGFLAKHTERLCEALRANCELHHLDHLDLSNNSLGD EGVALLAQLLPGLGPLQSLNLNRNGVSLDAVFGLIACMSSGQWVFHLDVSLENDHVLLRG AGTSRDALAGRCGQEPPAGAPLLAGSQRCTSRSFSLQGCQLEPRSLACLCTALEKCPGPL EVNLSCKTLCDESLKTLLQCLPQLPQLSLLHSRGSDAFFCTLWGCCLFHTHRLNHTVLSS KSPFLLADIFNLCPRVQKVTLRSLCDAALHFGSKEEQEGICFGFPGCSLGQEQVESLCCA LSSCNGLIQLDLRDNLLGDGGLRCLLECLPQLPISGWLDLSHNGISQEGVLCLLETLPSC PRVCEVSVSLDSEQDFRIRLSKEEEAGTIMRLCECSFSPEHISRLATSLSQAQQLTELWL TRCHLDLPQLTNLLSLVNRPAGLLGLRLEEPWVGHISLPAVVEVCAQASGCLTELSLSET QLWLWLEFPHQEDNSEAMANRLAHCDLGTDHSLLMRQLMETCTRLQQLSLSQVNFSDDDT TKSRLLQNLLLSSCELKTFRLTFSCVSTESLVHLASGLRYCHHLEELDFSNNHLFEENIE LLMGVLQGTCRLKRLHLNHVPLEVSSLALLIQGLSHMTLLQHLSLRHDQIGDAGTQNLAA ILPKLPGLRKLDLSGNSIGPAGGVPLAKSLIHCRCLEEIILGNNALGDPTALGLAQRLPP QLRVLCLPSSHLGPEGALCLAQALEQCLHIEKFSLAENNLAGCVPHFRKSLPLLRQIDLI SCKIDDQVAKHLAASLMLCPALEEILLSWNFLGDKVAAELAQVLPQMGQLKRVDLEKNRI TACGAQLLAQGLVQGSRVPIIRLWNNPIPAEVAQRLQSLEPRLDFAFFDQQPQAL NT seq 5568 nt NT seq  +upstreamnt  +downstreamnt atggactctgagagtctccgactgaacactgagaacctgtggaccaggcttgtgagtctg ctgagtaaaaactcagaatggctgagtgccaaggttaggttctacctccctaccgtggac ctggatggcagcaaggcccttgaccctgagagcattgatgttcagctcaggaagctgcac acccagagccgggccacctgggagtctttcatccatagtctgtgcatggagcttgacgtg cctctagagctggaggtaccactgctgagcatctggggcccaaaagatgaactctctaag cagttaggagctggtgaggacagccatcctggacctccgcttcaccacggtgtcaagcgc ccttttcagagctatgggtcctcaccccgccggaagcactgcaggaagcagcagctagag ctcgctgagaagtatctgaagctcctgaagacctctgcccagcagtaccatggcggtgaa tgcccaggagcaaggcgtactcgtgcctccccacaagtctacatccccccaattctacag tggagccggggtacagcacccttggacgttcaggagggagccactaaagaagaccccgag gccacagacgacactgatgtgagcttccaggatctcttcaatttcaaggcccccaaggga cctcgagtgacagtcctgctgggaaaggctgggatgggcaagaccacgctggcacgtcgg ctctgctggaggtgggctgacggtcagctggaccgcttccgggctctgttcctttttgag ttccgccggctcaacctgatcacacattcgctgacactgccccagctcctttttgatcag tgcctgagccccgagtcaaaccctgatgctgtttttcagtacctggaggagaatgcccac caagtcctgctcatctttgatgggctggacgagatcctccatgctagttccacgggcgct gacaacagaggttcagccctcgccctcttctccgacctctgccgtgggaccctcctgccg ggctgctgggtgctggccacctctcgtcctgggaaactgcctgcctgtgtgcccacagag gccgccatggtgtacatgtggggctttgatgggcagcggatagagaagtacgccagccac ttcttcagtgacctgctgttacaggagctggccctggcggaaatgagagccaatgagcgc ctccggggaatgtgtgcagtacctgcactgtgcagggtcgcctgcttctgcctcggccgc ctgcttcccggaagccctccagggcagtctacggccctcctgcccaccgtaacccagctg ttcctgcagatggtggaaacgtttagcccccatgggactctgcctgccacatccttgttg ggccttgggaaggtggcccttagtagactggacattgggaaggtcattttctctatggaa aaagacattagtccttccctgatggcttttggagcggcccacagcctcctgacctccttc tgtattcgtaccagccctgagcaccaagaaataggctatgcctttgcccaccttagcctg caagagttctttgccgctctgtatctgatggccagtgacacggtagacaaagaaacactc acctactatgtcacactcaattcccattgggtgctgcggaccaaagctaggctgggcctc tccgaccatctctctaccttcctggcaggcctggcatcccacaactgtcgtgcattcctt tgccacctggctcaacaagaggaagcctgggtgagctccaggcaggctgctgttgttcag gtgctgaggaagctggctagccggaagcttacggggccaaagatgatagaattgtatcac tgtgtggctgagacccaggagctggagctggcgcagttcactgcccaaaacctccccgtc cagctctccttccacaatctcccactgacccgtgcagacctggctgcactggccaacatt ttggagcacagggttgcccccattcacctggattttgatggctgcccactggagccccaa tgcccagaggctctggtaggatgtggtcaagttgagaatctcagctttaaaagcagaaag tgtggggatgcctttgcagaagccctgggcaggagcttgcctactatggggagcctgaag atactagggttaacaggaagtaagatcacagcccaaggcatcaggcacctggtacaggct ttgcccctctgtttccagctggaggaggtcagcttgcatgacaaccagctgaaggaccca gaggtgatgagccttgtggagctgctcccttgcctgccaaagctccagaaacttgacctg agcagaaacagcgtctccgtgtcagcattgctgtccgcggtgaaggtggccatcacgtgt cctactgtcagaaagctgcaggtcagggagtccgacttcatcttccttctgtccccgatt gcagagacagctgtgcagcagtcaggagcatcaaacctacaggacaaagacagcctgaag gaagaaagacagagcctggaactcaggcttcagagatgtcagctcagggtccatgatgca gaaacccttgtggagctactccagaaatgtccctgcctggaagaagtggatctttcaggg aaccatctggaagatgaaggctgtcgacttgtggcagaggctgcttcccagctgcgaatt gcccagaaactggacctcagtgacaatggcctctctaagactggggtgacctatgtgttg agagccatgaaaacatgtgggaccctgaaggagatgcatatcagcctgctgaccaacacc gtggtactcacatttgcccaggagccaagggagcaagaggggagctgcaagacggaggca ccacttaccagctttgcattttctttgacctcggagatgtccgggagctctcgaagaatc aggctgacacaatgtggcttcctggccaagcacacagagaggctctgcgaggcgctgaga gccaactgcgagctccaccacttggatcaccttgacctatcaaacaactctctgggggat gaaggggtggccctactagcccagctgctcccaggactaggtcccctgcagtccttgaac cttaacaggaacggtgtgtccctggatgctgtgtttggcttgatcgcatgcatgtcttcc gggcagtgggtgttccacctagatgtcagccttgagaatgaccacgtcctccttcgagga gctggaacaagcagggatgcactagctggcagatgtggacaagagcccccagctggagcc ccgttactggcaggcagtcagcgctgcacctccaggagcttcagccttcaggggtgtcaa ctggaacctcggagtcttgcctgcctctgtactgctctggagaagtgcccagggcctctg gaagtcaacttgtcctgcaagaccctgtgtgatgagagcctgaagaccctgctgcagtgt ctgccccagctgccccagctcagcctgctgcactccagaggatccgatgccttcttctgc actctttggggatgctgcctcttccatacacacaggctgaaccacacagtcctatcttca aagagccccttcctgctagccgacatcttcaacctgtgcccacgagttcagaaggtcact ctcaggtccctatgcgatgctgccctgcactttggctccaaggaagagcaagagggtata tgctttggctttccggggtgcagcctcggccaggagcaggtggagtcactgtgttgtgca ctgagcagctgcaacggtctcatccagcttgacctcagggacaacctgctgggtgacggt gggctcaggtgccttctggaatgcctgccacagttacccatctctggatggcttgacctc agccacaatggcatctctcaggaaggggtcctgtgcctgctggagaccctgccttcctgc cctcgtgtctgtgaggtctctgtgagtctggactctgagcaggacttccggatacgcttg tccaaagaggaagaagctgggacaataatgaggctatgtgagtgcagcttcagtccagaa cacatatccagactggctaccagcctgagccaggcccaacagctgacagagctctggctg accaggtgccacttggacctgccacaactgaccaacctcctgagtctggtgaatcgacca gcagggttgctgggcctcaggttggaagagccctgggtgggccacatcagcttaccagct gtggtggaagtctgtgcccaggcctcaggatgcctcactgaattaagcctctccgagacc cagctgtggctctggctggaatttcctcaccaggaagacaattccgaggccatggcaaac aggttggctcactgtgacctgggaactgaccacagtcttcttatgagacagttgatggag acatgtaccagactgcaacagctcagcttgtctcaggttaacttcagtgacgatgacacc accaagtccaggctgctgcagaacctcctgctgtctagctgtgaactcaaaaccttccga ctgaccttcagctgcgtaagcacagagagcctggtccacctggcatctggtctgagatac tgccaccatctggaagagctggatttctctaacaaccatctctttgaggagaacatagag ctactgatgggagtccttcaggggacctgcaggctaaagaggctgcacctcaatcacgtt ccactggaagtctcctccctggccttgctcattcaaggactaagtcacatgaccctactg cagcaccttagcttgagacacgaccagattggagacgcgggtacccagaacttagcggcc atcttgccaaagcttccagggctcaggaagttagacctctcagggaacagcattggccca gcggggggagtgccgttggcaaagtctctcatccattgcaggtgcttggaggagatcata ctgggcaacaatgctctgggggaccccacggccctagggctggctcagagattgcctcca caactgagggtcctgtgtctgccatccagccatctgggtcctgagggggccctgtgcctg gcccaggccctggagcaatgcctacacatagaaaagttcagcttggcagagaataacctg gctggatgtgtcccacatttccgcaagagtctcccactgctcagacaaattgacctgatt tcctgcaaaattgatgaccaagttgccaagcaccttgccgccagcctcatgctctgccca gctctggaagaaatcttgctgtcctggaacttcctgggtgacaaggtggctgctgagttg gcccaggtcctgccacagatggggcagctgaagagagtggacttggagaagaaccggatc acagcatgtggagcccaactcctggctcaggggctggtccagggctcccgtgtgccaatc attcgcctctggaacaaccccattcctgccgaggtggcccagcgtctacagagcctggag cccaggttggactttgccttctttgaccagcagccccaggctctttga

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