Alexandromys fortis (reed vole): 126502893
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Entry
126502893 CDS
T08493
Name
(RefSeq) enhancer of mRNA-decapping protein 4 isoform X1
KO
K12616
enhancer of mRNA-decapping protein 4
Organism
mfot
Alexandromys fortis (reed vole)
Pathway
mfot03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mfot00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
126502893
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mfot03019
]
126502893
Messenger RNA biogenesis [BR:
mfot03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
126502893
mRNA degradation factors
5'-3' decay
Decapping complex
126502893
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ge1_WD40
EDC4_C
WD40
WD40_WDHD1_1st
Beta-prop_EDC4L
Beta-prop_TEP1_2nd
WD40_Prp19
WD40_CDC20-Fz
Beta-prop_HPS5
WDR55
DUF445
Motif
Other DBs
NCBI-GeneID:
126502893
NCBI-ProteinID:
XP_050000194
LinkDB
All DBs
Position
Unknown
AA seq
1451 aa
AA seq
DB search
MASCASIDIEDATQHLRDILKLDRPAGGSNAESQRPSSAYNGDLNGLLVPDPLSSGDGNS
TSKPGIRTMPLINLQEKQVICLSGDDSSTCIGILAKEVEIVASSDSSISSKARGSNKVKI
QPVAKYDWEQKYYYGNLIAVSNSFLAYAIRAANNGSAMVRVISVSTSERTLLKGFTGSVA
DLAFAHLNSPQLACLDEAGNLFVWRLALVKGKIQEEILVHIRQPEGTPLNHFRRIIWCPF
IPEESEDCCEESSPTVALLHEDRAEVWDLDMLRSSHNAWPVDVSQIKQGFIVVKGHSTCL
SEGALSPDGTVLATASHDGFVKFWQIYIEGQDEPRCLHEWKPHDGRPLSCLLFCDNHKKQ
DPEVPFWRFLITGADQNRELKMWCTVSWTCLQTIRFSPDIFSSVSVPPSLKVCLDLSAEY
LILSDVQRKVLYVMELLQNQDEGRACFSSISEFLLTHPVLSFGIQVVSRCRLRHTEVLPA
EEENDSLGAESSHGAGAVESAAGVLIKLFCVHTKALQDVQIRFQPQLNPDVVAPLPTHTA
HEDFTFPTAFGESRPELGSEGLASAAHGSQPDLRRIVELPAPADFLSLSSETKPKLMTPD
AFMTPTASLQQISASPSSSSSSSSSSSSSSSSSSLTAVSAVSSSSAMDPSLPSRPSEELT
LSPKLQLDGSLTINSTSSLQASPRSLLPGLIPGPADKLTTKGPGQVSTAASALSLDLQEV
EPLGLPQASPSRTRSPDVISSASTALSQDIPEIASEALSRGFGSSVPEGLIEPDSMASAA
SALHLLSPRPRQGPELGSQLGLDGGSGDGDRHSTPSLLEVALTQEVATPDSQVWPTAPDI
TRETCSTLAESPRNGLQEKHKSLAFHRPPYHLLQQHDSQDTSAEQSDHDDEVASLASASG
GFGSKIPTPRLPAKDWKTKGSPRTSPKLKRKSKKDDGDSAVGSRLTEHQVCKGVLFYPWD
PIPRMGGTLSYSFLWWVEIGRTDIISCQCFWQVAEPPEDWTALIWQQQRELTELWHNQEE
LLQRLCAQLEGLQNTVTDHVERALETRHEQEQRRLERALAEGQQRGGQLQEQLTQQLSQA
LSSAVAGRLERSIRDEIKKTVPPCVSRSLEPVAGQLSNSMATKLTAVEGSMKENISKLLK
SKNLTDAIARAAADTLQGPMQAAYREAFQSVVLPAFEKSCQAMFQQINDSFRLGTQEYLQ
QLESHMKSRKAREQEAREPVLAQLRGLVSTLQSATEQMAATVSSSVRAEVQHQLHVAVGS
LQESILAQVQRIVKGEVSVALKEQQATVTSSIMQAMRSAAGTPVPSAHLDCQAQQAHILQ
LLQQGHLNQAFQQALTAADLNLVLYVCETVDPAQVFGQPPCPLSQPVLLSLIQQLASDLG
TRSDLKLSYLEEAVMHLDHSDPITRDHMGSVMAQVRQKLFQFLQADPHNSLGKAARRLSL
MLHGLATPSLP
NT seq
4356 nt
NT seq
+upstream
nt +downstream
nt
atggcgtcctgcgcgagcatcgacatcgaggacgccacgcagcatctgcgggacatcctc
aagctggaccggcccgcgggaggctccaatgcagaaagccaaaggccatccagtgcctac
aatggagatctcaatgggctcctggttccagacccactcagctcaggtgatggtaactca
acaagcaaacctggtatacggaccatgccacttattaacctgcaggaaaagcaagtcatt
tgcctctctggagatgacagctccacttgcattgggattttggccaaggaggtggaaatt
gtagccagcagtgattctagcatttccagcaaggcacgggggagcaacaaggtgaaaatc
cagcctgtcgccaagtatgactgggagcagaaatactactatggcaacctgattgcagtg
tctaactccttcttggcgtacgccattagggctgccaacaacggctctgcaatggtccgt
gtgatcagtgtcagcacttcagagcggaccctgctcaaaggtttcacaggcagtgtggct
gatctggccttcgcacacctcaactctccacagcttgcctgcctggatgaggctggcaat
ctttttgtgtggcgcttggctctggttaagggtaaaattcaagaagagattttagttcat
atccgccagccagagggcacgccactgaaccactttcgaaggatcatctggtgccccttc
atccccgaggagagtgaggactgttgtgaggagagtagcccaacagtagccctgctgcat
gaagaccgggcggaagtatgggacctggatatgcttcgctccagccacaacgcctggcct
gtggatgtcagccaaatcaagcagggcttcattgtggtaaaaggccatagcacgtgtctc
agtgaaggagccctctctcctgatggaactgtcctggctactgcaagccatgatggcttt
gtcaagttctggcagatctacattgaaggtcaggatgagccaaggtgtctgcatgaatgg
aagcctcacgatgggcggcccctttcttgcctcttattctgtgataaccataagaaacag
gatcctgaggtcccattctggagattcctcattactggtgctgaccagaatcgggagctg
aagatgtggtgcacagtgtcctggacctgcctgcaaaccattcgtttctccccagatatc
ttcagctcagtgagtgtacctcccagcctcaaagtttgcttggacctctcagcagagtat
ctgattcttagtgatgtgcagcgaaaggtcctctatgtgatggagctgctacagaaccaa
gatgagggccgtgcttgctttagttccatctctgagttcctgctcacccatcctgtgctg
agcttcgggatccaggttgtgagtcgctgccggctgcggcacactgaggtgctgcctgct
gaggaggagaatgacagtctgggggctgagagttcccatggggctggtgccgtggagtct
gcagctggggtgcttatcaaactcttctgtgtacacactaaagcactacaagatgtgcag
atccgcttccagccacagctgaatcctgatgtggtagccccactccctacccatacggct
catgaggacttcactttcccaacagcttttggagagtctcgacctgaactaggctctgag
gggctagcttcagctgcccatgggtctcagcctgacctccgacgcatcgtggaactgcct
gcacctgcagacttcctcagtctgagcagtgagaccaagcctaagttgatgacacccgac
gctttcatgacgcccaccgcttccctgcagcagatctctgcgtcccctagcagcagcagc
agcagcagtagcagcagtagcagtagtagcagcagcagctccctaacagctgtgtctgct
gtgagtagctcctcagccatggacccttccttgcccagtaggccatccgaggagctgacc
ttgagtcccaagctgcagctggatggcagtctgacaataaacagtaccagcagcctgcag
gcaagccctcgaagcctccttcctggcctgatcccaggcccagctgacaaattgaccacc
aagggacctggacaggtgtctactgctgcctctgcactgtccttggatttgcaggaagtg
gagccactggggctaccccaggcctctcccagtcgcacccggtcccctgatgtgatctcc
tcagcttccactgccctgtcccaggacatccctgaaattgcctctgaggccctgtcccgt
ggctttggctcctctgtccctgaaggcctcattgagccagacagtatggcttccgcagct
tcagccctacacttactgtctcctcggcccaggcaaggtcctgagcttggctctcaactt
ggcctagatggaggctctggggatggggatcggcatagtaccccctccctactggaagta
gccttgacccaggaggttgcaacccctgacagtcaagtctggcctacagcacctgacatt
actcgtgagacttgtagtaccttggcagaaagccccaggaatggcctccaggaaaagcac
aaaagcctggccttccaccggccaccttatcacctactgcagcaacatgacagccaggac
accagtgctgaacaaagtgaccatgatgacgaggttgccagccttgcttctgcctcaggg
ggttttggcagcaaaattcctactccacggctgcccgccaaggattggaagaccaaagga
tcccctcggacttcacccaagctcaagaggaaaagcaagaaggatgatggggattcagct
gtgggatcccggctcacagagcaccaggtatgtaagggagtacttttctacccttgggat
cccatcccaaggatgggagggactttaagttattcctttttatggtgggtggagatagga
aggacagacattataagctgtcagtgcttctggcaggtggcagagccccctgaggactgg
acagcattaatttggcaacaacaaagagagctgacagagctatggcacaaccaagaagaa
ctgctacagcgtctctgtgcccaacttgaaggtctgcagaacactgtcactgaccacgta
gaacgtgccctggagacccggcatgagcaagagcagcggcggctggagcgggctctggct
gaggggcagcaacggggtgggcagctgcaggagcagctgacacagcaactgtcccaggcc
ttgtcttcagctgtggctgggcggctggagcgcagtataagggatgaaatcaagaagaca
gttcctccatgtgtctccagaagtctggagcctgtggcaggtcagctaagcaactccatg
gctaccaaactcacagcagtagaaggcagcatgaaagagaatatctctaagctactcaag
tccaagaacttgacagatgccattgcccgagcagctgcagacacattacagggaccaatg
caggctgcctaccgggaagccttccagagtgtggtattgccagcttttgagaagagttgc
caggccatgttccagcaaatcaatgacagctttagactgggcacacaggaatatctgcag
cagctagagagtcacatgaagagccgaaaggcacgtgaacaggaagctagggagcctgtg
ctggcccaacttcggggcctggtgagcacactgcagagtgccactgagcagatggcggcc
actgtgtccagcagtgttcgggctgaggtgcagcaccagctgcatgtggctgtgggcagc
ttgcaggagtcaattttagcacaagtacaacgcattgttaagggtgaagtaagtgtggcc
cttaaggaacaacaggccaccgtcacttccagcatcatgcaggccatgcgttcagctgcc
ggcacgcctgtcccttctgcccaccttgactgccaggctcaacaagcccatatcttgcag
ttactgcagcagggccacctcaatcaggccttccagcaggcactgacagccgctgatctc
aacctggtgctgtatgtgtgtgaaactgtggacccagcccaggtttttgggcagccgccc
tgtccactgtcccagcctgtactcctttccctaatccagcagctggcatctgaccttgga
actagaagtgacctcaagctcagctatttggaagaggctgtgatgcacctggaccacagt
gatcccatcactcgagaccacatgggctctgtcatggcgcaggtgcgccagaagctcttc
cagttcctgcaggctgatccacacaactcacttggcaaagctgcccgtcgcctcagccta
atgttacacgggcttgcgacccctagcctcccttag
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integrated database retrieval system
