Alexandromys fortis (reed vole): 126503401
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Entry
126503401 CDS
T08493
Name
(RefSeq) collagen alpha-1(XIV) chain isoform X1
KO
K08133
collagen type XIV alpha
Organism
mfot
Alexandromys fortis (reed vole)
Pathway
mfot04974
Protein digestion and absorption
Brite
KEGG Orthology (KO) [BR:
mfot00001
]
09150 Organismal Systems
09154 Digestive system
04974 Protein digestion and absorption
126503401
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
mfot00535
]
126503401
Proteoglycans [BR:
mfot00535
]
Extracellular matrix (ECM) proteoglycans
Others
126503401
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
VWA
fn3
Collagen
VWA_2
Pur_ac_phosph_N
Ig_DSCAM-DSCAML_C
DUF4992
Motif
Other DBs
NCBI-GeneID:
126503401
NCBI-ProteinID:
XP_050001022
LinkDB
All DBs
Position
Unknown
AA seq
1797 aa
AA seq
DB search
MKIFQREMRYWLLLAFLAVGYFCTIVRSQVAPPTRLRYNVISQDSIQISWKAPRGKFGGY
KLLVAPASGGKTNQLNLQNAATKAIIQGLLPEQNYTVQLIAYNKDKESKPAQGQFRIKDL
EKRKDPTKPRVKVVDKGNGSKPTSPEEIKFFCETPAIADIVILVDGSWSIGRFNFRLVRN
FLENLVTAFNVGSEKTRIGLAQYSGDPRIEWHLNAFNTKDEVIDAVRSLPYKGGNTLTGL
ALNFIFENSFKPEAGSRSGVPKIGILITDGKSQDDIIPPSRNLRESGVELFAIGVKNADL
NELQEIASEPDSTHVYNVAEFDLMHTVVESLTRTVCSRVEEQDREIKASALATIEPPTEL
MTSEVTARSFMVNWTHTPGKVEKYRVVYYPTRGGKPEEVVVDGSVSSVVLKNLMSSTEYQ
IAVFAVSAHTASEGLRGTETTLALPMASDLELYDVTESSMRVKWDVVPGATGYLILYAPL
TEGLAGDEKEMKIGETHTDIELSGLFPNTEYTVTVYAMFGEEASDPATGQATTLPLTPPR
NLRISNVGSNSARLTWDPTSGKISGYRIVYTSADGTEINEVEVDPITTFPLKGLTPLTEY
SVAIFSIYEEGQSLPLVGDFTTEEVPAQQYLEIDDVKTDSFRVTWHPLSAEEGQHKLMWI
PVYGGKTQEVALKEEQDSYVVEGLDPGTEYEVSLLAVLDDGSESEVVTAVGTTLDDFWTQ
APTTVEPTSPVTSVLQTGIRNLVVDDETATSLRVTWDISDGNVEQFRVTYLTAQGDPMEE
VVGTVLVPGMQNNILLKTLTPDTEYKVTVTPIYTTGEGVSVSAPGRTLPSSGPQNLRVSE
EWYNRLRITWDPPSAPVKGYRIVYKPVSVPGQTLETFVGADINTIVITNLLSGMDYNVKI
FASQAAGFSDALTGLVKTLFLGVTDLQAHQVETTSLCARWQIHRHATAYRIVLESLQDTQ
AQESTLGGGVNRHCFYGLQPDSDYKISVYTKLQEIEGPSVSIMQRTQPLPTEPPTFAPTI
PPAKEVCKAAKADLVFMVDGSWSIGDDNFNKIINFLYSTVGALDKIGADGTQVAMVQFTD
DPRTEFKLDAYKTKETLLDAIRHISYKGGNTKTGKAIKYVRDTLFTAESGTRRGIPKVIV
VITDGRSQDDVNKISREMQADGYNIFAIGVADADYSELVRIGSKPSARHVFFVDDFDAFK
KIEDELITFVCETASATCPMVHKDGIDLAGFKMMEMFGLVEKDFSAVEGVSMEPGTFNLF
PCYQIHKDALVSQPTKYLHPEGLPSDYTMSFLFRILPDTPQEPFALWEILNKNSDPLVGI
ILDNGGKTLTYFSYDYTGDFQTVTFEGPDIRKMFYGSFHKLHVVISKTLAKVVVDCKEVG
QKAINASANITSDGVEVLGRMVRSRGPNGNSAPFQLQMFDIVCSTTWANKDRCCELPGLR
DEEACPDLPRSCSCSETNEVALGPAGPPGGPGLRGPKGQQGEQGPKGPEGPRGETGPAGP
QGPPGPQGPSGLSIQGMPGMPGDKGDKGDAGLPGPQGVPGGVGSPGRDGSPGQRGFPGKD
GSSGPPGPPGPIGIPGAPGVPGIMGSMGPQGASGPPGVPGPKGERGERGDLQSQAMVRAV
ARQVCEQLIQSHMARYTAILNQIPSHSSSIRTIQGPPGEPGRPGSPGTPGDQGPPGAPGF
PGNAGVPGTPGERGLTGLKGEKGNPGIGTQGPRGPPGPAGPSGESRPGSPGPPGSPGPRG
PPGHLGVPGPQGPSGQPGYCDPSSCSAYGVGVSHPDQPEFTPVQDEQEAMDLWSSSI
NT seq
5394 nt
NT seq
+upstream
nt +downstream
nt
atgaagatttttcagcgtgagatgcggtactggctgcttctggcttttttggcggttggt
tatttctgcaccatcgtccggagtcaagtggctcctcccacaaggttaagatacaatgta
atatcccaggacagcatacagatttcatggaaagctcccagagggaaatttggtggatac
aaactactggtggctccggcttcaggggggaaaaccaaccagctgaatctgcagaacgct
gcaacaaaagcgattatccaaggccttctgccagagcagaattacacggttcagcttatc
gcctacaataaagacaaagaaagcaaaccggctcaaggccagttcagaattaaagattta
gagaaaagaaaagatccgacaaagcccagagtcaaggttgtggacaaaggaaatggaagt
aaaccaacttcaccagaagagataaaattcttctgtgagactccagccatcgctgacatt
gtcatcctggtcgatgggtcgtggagtatcgggagattcaacttcaggctggtgcggaat
ttcttggaaaacctggtcacagcattcaacgtgggctcagagaagacccggattggcttg
gcacaatacagcggggaccccagaatagagtggcacttgaacgcctttaacacaaaggat
gaagtgattgacgcggtccgaagccttccctacaaaggaggaaacaccctaacaggcctt
gctctgaacttcatttttgagaacagctttaagccagaagcaggatcaaggagtggagtt
cccaagatcggcattttaatcacagatggaaaatcccaagatgacattatcccgccatcc
agaaacctccgggagtccggtgtagagctctttgccataggggttaaaaatgctgacctg
aatgagctgcaggagattgcctctgagccagacagcactcacgtctacaatgttgctgaa
ttcgacctgatgcacacagtagtggagagcctgaccaggactgtgtgctccagagtggaa
gagcaggacagggagattaaagcctcagcccttgccaccattgagccacctacagagctg
atgacttctgaagtcaccgccaggagctttatggttaactggactcacaccccaggaaaa
gtggaaaagtacagagtggtgtattatcccacccgaggtgggaaaccggaagaggtggtg
gtggacggaagtgtgtcttctgtagtgttgaaaaacttgatgtcatcgaccgagtaccag
atagcagtgttcgcagtatctgcccacacagccagtgaaggcctgcggggaacggaaacc
acactggccttacccatggcttccgacctggagctgtacgacgtgaccgagagcagcatg
cgtgtcaagtgggatgtggtgcctggtgccacgggctatctgatcctctatgcccctctc
acagaagggctggcgggggacgagaaagagatgaaaatcggagagacccacacagacatt
gagctgagcggcctgttccccaacacagaatatacagtcaccgtgtacgccatgtttgga
gaagaggccagcgaccctgctacggggcaagcgacaaccctgcccttaaccccaccaaga
aatctgagaatctccaacgttggctctaatagtgcccggttaacctgggaccccacatcg
ggaaagatcagtggttacagaattgtgtacaccagtgcggatgggacagaaatcaacgag
gttgaagttgatcccatcactacgttccccctgaaaggcttgacccccctcacggagtac
tctgttgccattttctccatctatgaagaggggcagtccctgcctctggttggagacttt
acgacagaggaagttcccgcccagcaatacttggaaattgatgacgtgaagacagacagt
ttccgggtgacctggcatccgctctcggctgaggaagggcaacacaaactcatgtggatt
ccagtctacggcgggaagactcaggaggttgccctcaaggaagagcaggactcctatgtt
gttgaaggcctggaccctggaactgagtatgaagtctcactgttagctgtgctcgatgat
ggcagcgagagcgaggtggtgactgctgttgggaccacactcgatgacttttggacacaa
gcacccacaactgtagaacctaccagccctgtgacttcagttctccagacgggaatcaga
aacctggttgtagatgatgaaactgctactagcctgcgggtcacgtgggacatttctgac
ggcaatgtggagcagtttcgggtgacctacctgacagcccaaggggaccccatggaagaa
gtggtaggaacggttctggtgcctggaatgcagaacaatatccttctgaagactctaact
ccagacaccgaatacaaagtcacggtgactcccatctacacaaccggagaaggcgtcagt
gtctccgcccctgggagaactttgccgtcttctggacctcaaaacttacgggtctcggaa
gaatggtacaaccggttgcgcattacatgggacccaccatctgcccccgtgaagggctat
aggattgtctacaaacctgtgagcgttcctggtcaaactctggagacgttcgtgggcgcc
gacattaacaccattgtcatcaccaatctcctcagtgggatggactataacgtgaagatc
tttgcttcccaggccgcaggcttcagcgatgctctgactggccttgtgaaaaccttgttc
ttaggtgtgacggatctccaagcccatcaggttgaaacaacaagcttgtgtgctcggtgg
caaatacaccgccatgccacagcctataggatagttctagaatcccttcaggatacacaa
gcacaagaatctaccttggggggaggcgtaaacaggcattgcttctatggacttcagccc
gattcagactataaaatcagtgtttacacgaagctccaggagatcgagggaccaagtgtg
agcatcatgcaaaggacacaaccacttccgaccgagccaccaacgtttgctccaaccatt
ccaccagcaaaggaagtatgtaaagcagccaaggcagacctagtgttcatggtggacgga
tcctggagtattggcgatgacaatttcaataagatcattaatttcctgtatagcaccgtg
ggagccctggacaagattggtgcagatggaactcaggtggcaatggttcagttcactgat
gaccccagaacagaattcaaactcgatgcttacaaaaccaaagagacacttcttgacgca
atcagacacatttcctacaaaggaggaaatactaaaacagggaaagctatcaagtatgtt
cgcgataccttgttcactgcagagtcaggtacgaggagaggcattccgaaggttatcgtg
gttatcactgatggaagatcacaagatgatgtcaacaaaatctccagggagatgcaggcc
gatggttacaacatctttgccattggtgtggctgatgctgattactcagagttggttcgg
attggcagcaaacccagcgcacgccatgtcttcttcgtggatgacttcgatgccttcaag
aaaatcgaagatgaattaattacttttgtctgtgaaactgcatcagcaacctgcccaatg
gtgcacaaggatggaattgacctcgcaggatttaagatgatggaaatgtttggtttagtt
gaaaaggatttttctgcagtggaaggagtttctatggaacctggcaccttcaatttgttc
ccatgctatcaaatccacaaagatgctctggtttcccagccaaccaagtatctgcatccg
gaagggctgccttctgactacacaatgagtttcctgttccggattcttcctgacactcca
caggagccatttgctctttgggagattttaaataaaaattctgacccactggttgggatc
attttagacaatggagggaaaactctgacttatttcagctatgactatactggagatttt
cagactgttacttttgaaggacctgacatcaggaaaatgttctatggaagctttcataag
ctccatgttgttatcagcaagactttggccaaagtggtcgttgactgtaaggaagtgggc
cagaaggcaatcaacgcatccgccaacatcacgtcggatggtgtggaagtgttggggaga
atggtcagatccagaggacccaacggaaactctgcaccattccagttacagatgtttgat
atcgtttgctctacaacatgggccaataaagacagatgctgtgaacttcccggcctgagg
gatgaagaggcttgcccagacctcccacgttcctgctcttgctcagaaactaacgaagtg
gctctaggaccagctggccccccaggtggtccaggactccgaggaccaaaaggccaacaa
ggtgaacagggtccgaagggaccagagggccctcgaggggaaacaggtcctgcaggaccc
cagggtccccctggaccccaaggacccagtggtctgtccattcaaggcatgcctggtatg
cccggtgacaaaggagataaaggagatgctggccttcctggtccacagggtgtccctgga
ggtgtaggttcaccaggacgtgatggctcaccaggccagaggggatttcctggaaaggat
ggttcttctggtcctccagggccacccgggccaattggcattcctggagcccctggtgtc
ccagggatcatgggaagcatgggaccacaaggagcctcggggccacctggtgtccctgga
ccaaagggagagcgaggtgaacgaggagacctgcaatctcaggccatggtgagggcagtg
gcacgccaagtgtgtgagcagctcatccagagtcatatggccaggtatacagccatcctc
aaccagattcccagccattcctcatccatccggaccatccagggccctcctggggagcct
gggagaccaggttcacctggaacccctggagaccaaggacccccaggtgccccaggcttc
ccgggcaatgcaggtgtgccggggaccccaggagaacgaggtctaactggtctcaaagga
gagaaaggcaatccaggcatcggaactcagggccccagaggtccccctggaccagcagga
ccctcaggggaaagtcgtcctggcagtcctgggccacctggctctcctggaccaaggggt
cccccaggccacctgggagtacctggaccacagggtccgtctggccagcctggatattgt
gacccatcgtcatgttctgcctacggtgttggagtgtcccatccggatcagcctgagttc
accccggtccaggacgagcaggaggccatggatttgtggagctcgagcatctga
DBGET
integrated database retrieval system
