Alexandromys fortis (reed vole): 126503623
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Entry
126503623 CDS
T08493
Name
(RefSeq) transcription initiation factor TFIID subunit 5
KO
K03130
transcription initiation factor TFIID subunit 5
Organism
mfot
Alexandromys fortis (reed vole)
Pathway
mfot03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
mfot00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
126503623
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mfot03021
]
126503623
03036 Chromosome and associated proteins [BR:
mfot03036
]
126503623
Transcription machinery [BR:
mfot03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
126503623
Coactivators
SAGA/TFTC/STAGA complex
126503623
Chromosome and associated proteins [BR:
mfot03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
PCAF complex
126503623
STAGA complex
126503623
TFTC complex
126503623
SAGA complex
126503623
SLIK complex
126503623
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40
WD40_Prp19
TFIID_NTD2
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_TEP1_2nd
Beta-prop_CAF1B_HIR1
EIF3I
Beta-prop_EML_2
WD40_MABP1-WDR62_2nd
Beta-prop_WDR90_POC16_2nd
Beta-prop_EML
WDR55
NBCH_WD40
WD40_MABP1-WDR62_1st
Beta-prop_WDR75_1st
ANAPC4_WD40
Beta-prop_TEP1_C
Beta-prop_SCAP
Beta-prop_IFT122_1st
WDR90_beta-prop_4th
Beta-prop_RIG_2nd
Beta-prop_IFT140_1st
Beta-prop_Vps41
Beta-prop_EIPR1
Beta-prop_DCAF4
WD40_RFWD3
Beta-prop_HPS5
Beta-prop_WDR19_1st
Beta-prop_SPT8
WD_LRWD1
Beta-prop_DCAF12
Beta-prop_Nup120_160
PEP5_VPS11_N
RAB3GAP2_N
CDK5RAP3
Beta-prop_RIG_1st
eIF2A
Cytochrom_D1
PROPPIN
Motif
Other DBs
NCBI-GeneID:
126503623
NCBI-ProteinID:
XP_050001395
LinkDB
All DBs
Position
Unknown
AA seq
800 aa
AA seq
DB search
MAALAEEQTEVAVKLEPEGPPTLLPPQTGDGAGEGSGGTPNNGPNGGGGNVAATAAAGGD
GGTPKPVVAVSAAAPAGTAPVSAAPTEAGAPHDRQTLLAVLQFLRQSNLREAEEALRREA
RLLEEAVAGSGAPGELDGAGAEAANALLSRVTASVPGSAAPDPPGSGASGATVFSGSASG
PAAPGKVGSVAVEDQPDVSAVLSAYNQQGDPAMYEEYYSGLKHFIECSLDCHRAELSQLF
YPLFVHMYLELVYNQHENEAKSFFEKFHGDQECYYQDDLRVLSSLTKKEHMKGNETMLDF
RTSKFVLRISRDSYQLLKRHLQEKQNNQIWNIVQEHLYIDIFDGMPRSKQQIDAMVGSLA
GEAKREANKSKVFFGLLKEPEIEVPLDDEDEEGENEEGKPKKKKPKKDSAGSKSKKQDPN
APPQNRIPLPELKDSDKLDKIMNMKETTKRVRLGPDCLPSICFYTFLNAYQGLTAVDVTD
DSSLIAGGFADSTVRVWSVTPKKLRSVKQASDLSLIDKESDDVLERIMDEKTASELKILY
GHSGPVYGASFSPDRNYLLSSSEDGTVRLWSLQTFTCLVGYKGHNYPVWDTQFSPYGYYF
VSGGHDRVARLWATDHYQPLRIFAGHLADVNCTRFHPNSNYVATGSADRTVRLWDVLNGN
CVRIFTGHKGPIHSLTFSPNGRFLATGATDGRVLLWDIGHGLMVGELKGHTDTVCSLRFS
RDGEILASGSMDNTVRLWDAIKAFEDLETDDFTTATGHINLPENSQELLLGTYMTKSTPV
VHLHFTRRNLVLAAGAYSPQ
NT seq
2403 nt
NT seq
+upstream
nt +downstream
nt
atggcggcgctggcggaggagcagacggaggtggcggtcaagctagagcctgagggaccg
ccgacgctgctacctccgcagactggcgacggcgcaggcgagggtagcggtggcactccc
aacaacggccccaacggcggcggcgggaatgtggcggcgacggcggcggccggcggggat
ggcgggacccccaagcccgtggtggccgtctctgccgctgccccggcggggacggccccg
gtgtccgccgctcccacagaggccggcgctccccacgaccggcagacccttctggcagtg
ctgcagttcctccggcagagcaacctccgcgaggccgaagaggcgctgcgccgtgaggcc
aggctgctggaggaggctgtggcgggctccggagctccgggagagctggacggggccggc
gcggaggcggctaacgcgcttctcagccgggtcaccgcttcagtccccggctctgcggcc
cctgaccctccgggcagcggcgcttcgggggctacggtattctcgggttcagcctcaggt
cctgcggctccaggaaaagttggaagtgtagctgtggaagaccagccagatgtcagtgct
gtcttgtcggcctacaaccaacaaggagaccctgcaatgtatgaagaatactacagcgga
ctgaaacacttcattgaatgttctctggactgccatcgagcagaattatcccaactcttt
tatcctctgtttgtacacatgtacttggagctagtttataatcaacatgaaaatgaagca
aaatcgttctttgagaagttccatggagatcaggaatgttattaccaggatgacctacga
gtattatctagtcttaccaaaaaggagcatatgaaagggaatgaaaccatgctggacttt
cgaacaagtaaatttgttctccgtatttcccgtgactcttaccaactcttgaagcggcat
cttcaggagaaacagaacaatcagatatggaacatagttcaggagcacctctacattgac
atctttgatgggatgcctcgtagtaagcaacagatagatgccatggtgggaagtctcgct
ggagaggctaagcgagaagcaaacaaatcaaaggtattttttggtttattaaaagaacca
gaaattgaggtgcctttggatgatgaggatgaagaaggagaaaatgaagaaggaaaacct
aaaaagaagaagcctaagaaggatagtgctgggtctaaaagcaagaaacaagatcccaat
gcccctcctcaaaacagaatccctctccctgagttgaaagattcagacaaactggacaaa
ataatgaatatgaaagaaaccaccaaacgagtgcgccttgggcccgactgcttaccctcc
atttgtttttacacattccttaatgcttaccagggcctcactgcggtggatgtcactgat
gattccagtctgattgctggaggttttgcagattcaactgtcagagtgtggtctgtgaca
cctaaaaagcttcgtagtgtcaaacaagcatcagatcttagtcttatagacaaagaatca
gatgatgtcttagaaagaatcatggatgagaaaactgcaagtgagttgaagattttgtat
ggtcacagtgggcctgtctatggagccagcttcagtccggataggaactatctgctctcc
tcttcagaggatggaactgttagactctggagccttcagacgtttacttgcttggtggga
tataaaggacacaactacccagtatgggacacacagttttctccatatggatattatttt
gtgtcaggaggccatgaccgagtagctcggctttgggctacagatcactatcagccttta
aggatatttgctggacatcttgctgatgtgaactgcactcgatttcatccaaattcgaac
tatgttgctacgggctctgcagacagaactgtgcggctgtgggatgtgctcaatggtaac
tgtgtcaggatcttcactggacacaagggaccaattcattccttgacattttctcccaat
gggagattcctggctacaggagcaacagatggcagagtacttctttgggatattggacat
ggcttgatggttggagaattaaaaggccacactgatacagtgtgttcgcttaggtttagt
agagacggtgaaattttggcatcaggttcaatggataatacagtccggttatgggatgcc
attaaagcatttgaagatttagagactgatgactttactaccgccactggacatataaac
ctacctgagaattcccaggagttattattgggtacatatatgaccaaatcaacaccagtt
gtacacctacattttactcgaagaaacttggttctagctgcaggagcttacagtccgcaa
taa
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integrated database retrieval system
