Alexandromys fortis (reed vole): 126503916
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Entry
126503916 CDS
T08493
Name
(RefSeq) LSM8 homolog, U6 small nuclear RNA associated
KO
K12627
U6 snRNA-associated Sm-like protein LSm8
Organism
mfot
Alexandromys fortis (reed vole)
Pathway
mfot03018
RNA degradation
mfot03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
mfot00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
126503916
09123 Folding, sorting and degradation
03018 RNA degradation
126503916
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mfot03019
]
126503916
03041 Spliceosome [BR:
mfot03041
]
126503916
Messenger RNA biogenesis [BR:
mfot03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
126503916
mRNA degradation factors
5'-3' decay
Lsm complex
126503916
Spliceosome [BR:
mfot03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
126503916
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LSM
DUF150_C
Motif
Other DBs
NCBI-GeneID:
126503916
NCBI-ProteinID:
XP_050001850
LinkDB
All DBs
Position
Unknown
AA seq
96 aa
AA seq
DB search
MTSALENYINRTVAVITSDGRMIVGTLKGFDQTINLILDESHERVFSSSQGVEQVVLGLY
IVRGDNVAVIGEIDEETDSALDLGNIRAEPLNSVAH
NT seq
291 nt
NT seq
+upstream
nt +downstream
nt
atgacgtctgccttggagaactacatcaaccgaactgttgctgttatcacttccgatggg
agaatgattgtgggaacactaaaaggttttgaccagaccattaatttgattttggacgaa
agccacgagagggtgttcagttcttcgcaaggagtcgaacaagtcgtattaggattatac
attgtgagaggtgacaacgtagcggtcattggagaaattgacgaggagacggactctgcg
ctcgacttggggaacatccgagcagagcctctgaactccgttgcacactga
DBGET
integrated database retrieval system
