KEGG   Alexandromys fortis (reed vole): 126504129
Entry
126504129         CDS       T08493                                 
Name
(RefSeq) DNA mismatch repair protein Msh2
  KO
K08735  DNA mismatch repair protein MSH2
Organism
mfot  Alexandromys fortis (reed vole)
Pathway
mfot01524  Platinum drug resistance
mfot03430  Mismatch repair
mfot05200  Pathways in cancer
mfot05210  Colorectal cancer
Brite
KEGG Orthology (KO) [BR:mfot00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03430 Mismatch repair
    126504129
 09160 Human Diseases
  09161 Cancer: overview
   05200 Pathways in cancer
    126504129
  09162 Cancer: specific types
   05210 Colorectal cancer
    126504129
  09176 Drug resistance: antineoplastic
   01524 Platinum drug resistance
    126504129
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:mfot03400]
    126504129
DNA repair and recombination proteins [BR:mfot03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    Mismatch and loop recognition factors
     126504129
SSDB
Motif
Pfam: MutS_V MutS_III MutS_IV AAA_27 Tex_central_region
Other DBs
NCBI-GeneID: 126504129
NCBI-ProteinID: XP_050002129
LinkDB
Position
Unknown
AA seq 634 aa
MKLDMAAVRALNLFQGSVEDTTGSQSLAALLNKCKTAQGQRLVNQWIKQPLMDKNRIEER
LNLVEAFVEDSELRQTLQEDLLRRFPDLNRLAKKFQRQAANLQDCYRIYQGVNQLPSVLQ
ALKKYQGRHQALLSAVFVTPLTDLRSDFSKFQEMIETTLDMDQVENHEFLVKPSFDPNLS
ELREVMDGLEKKMQSTLISAARGLGLDPGKQIKLDSSAQFGYYFRVTCKEEKVLRNNKNF
STVDIQKNGVKFTNSELSSLNEEYTKNKGEYEEAQNAIVKEIVNISSGYVEPMQTLNDVL
AQLDAVVSFAHVSNAAPIPYVRPVILEKGKGRITLKASRHACVEVQDEVAFIPNDVHFEK
GAQTFHIITGPNMGGKSTYIRQTGVIVLMAQIGCFVPCESAEVSILDCILARVGAGDSQL
KGVSTFMAEMLETASILRSATKDSLIIIDELGRGTSTYDGFGLAWAISEYIATKIDAFCM
FATHFHELTALASQIPTVNNLHVTALTTEETLTMLYQVKKGVCDQSFGIHVAELADFPQH
VIECARQKALELEEFQNIGTSQGRDEMEPAAKRCCLDREQGEKIIVEFLSKVKQVPFTDM
SEESVMLKLKQLKAEVVAKNNSFVNEIISRVKVT
NT seq 1905 nt   +upstreamnt  +downstreamnt
atgaaattggacatggcagcagttagagccctcaaccttttccagggttctgttgaagat
accactggctctcagtctctggctgcattactgaataagtgcaaaactgctcaaggacaa
agattggtcaaccagtggattaaacagcctctcatggacaagaacagaatagaagagaga
ttaaatttagtggaagcttttgtagaagattcagaactgaggcagaccttacaggaggat
ttactgcgtcgatttccagatcttaaccgacttgccaagaaatttcagagacaagcggcg
aacttacaagactgttaccgaatatatcagggtgtgaaccagctccccagtgtcctgcag
gctctgaagaaataccaaggaagacaccaggcattgttgtcggcagtttttgtgactcct
cttactgatcttcgctctgatttttcaaaatttcaagaaatgatagaaacaactttggat
atggatcaggtggaaaaccatgagtttcttgtaaagccctcatttgatcctaacctgagt
gaactaagggaagtgatggacggcctggagaagaagatgcagtccacgttaataagcgca
gcccgggggcttggattggaccctggcaaacagattaagttggattccagcgcacagttt
ggatattattttcgtgtaacctgcaaggaagaaaaagtccttcgcaacaataagaacttc
agcaccgtggatattcagaagaacggggttaagttcaccaacagtgagctatcttcttta
aatgaagaatatactaaaaataaaggcgagtatgaggaggcccagaatgccattgttaaa
gaaatcgtcaatatttcttcaggctacgtagagccgatgcagacgctcaatgatgtgcta
gctcagttagacgccgtcgtcagcttcgcgcacgtctcaaatgcagcacccattccttac
gtccggccggtcatcttggagaaaggaaaaggaagaattactctgaaagcctccaggcat
gcttgtgttgaagtccaagatgaagtcgcgtttataccgaacgatgtgcactttgaaaag
ggtgcccagacgttccacatcatcaccggtcccaacatgggcggtaaatccacatacatt
cgtcagactggggtgattgtactcatggcccaaatcgggtgttttgtgccatgcgagtca
gcagaggtatccattttggattgcatcctggctcgagttggggctggtgacagtcagcta
aaaggtgtctccacgttcatggctgaaatgctggagactgcgtctatcctcagatcagca
accaaagattccttaataatcattgatgaactgggaagaggaacatcgacttacgatggg
tttggattagcatgggctatatcggagtacattgcaacgaagattgatgccttttgcatg
tttgcaacccattttcatgaacttacagctctggccagccagataccaaccgtgaacaat
ttgcacgtcactgcactaacgactgaagaaaccttaactatgctttaccaagttaaaaaa
ggtgtctgtgatcagagttttgggattcatgtggctgagcttgctgatttcccgcagcat
gtaatagagtgcgccagacagaaagctctcgagcttgaggagtttcagaacattggaacc
tcacagggacgcgatgagatggagccagccgccaagagatgctgcctggacagagagcaa
ggtgagaagattattgtggagttcctgtccaaggtgaagcaagtgccctttactgacatg
tcggaggagagcgtcatgctgaagctgaagcagctgaaagccgaggtggtcgcaaagaat
aatagcttcgtgaatgaaatcatttcacgggtaaaggtcacatga

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