Alexandromys fortis (reed vole): 126504186
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Entry
126504186 CDS
T08493
Name
(RefSeq) S-adenosyl-L-methionine-dependent tRNA 4-demethylwyosine synthase TYW1 isoform X1
KO
K15449
tRNA wybutosine-synthesizing protein 1 [EC:
4.1.3.44
]
Organism
mfot
Alexandromys fortis (reed vole)
Brite
KEGG Orthology (KO) [BR:
mfot00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
mfot03016
]
126504186
Enzymes [BR:
mfot01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.3 Oxo-acid-lyases
4.1.3.44 tRNA 4-demethylwyosine synthase (AdoMet-dependent)
126504186
Transfer RNA biogenesis [BR:
mfot03016
]
Eukaryotic type
tRNA modification factors
Methyltransferases
126504186
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Flavodoxin_1
Wyosine_form
Radical_SAM
SURF2
Motif
Other DBs
NCBI-GeneID:
126504186
NCBI-ProteinID:
XP_050002225
LinkDB
All DBs
Position
Unknown
AA seq
742 aa
AA seq
DB search
MPAHSDFAVTCGAWAPRRMGPPVDVWDFSSPLLLLWMNRFYIYLGCALGVTLWICVQVVI
KKQVIRSQERSFPGAPDGSPSLQQKQTHVSGVKIFYGSQTGTAKGFAVTLAEAVTSLDLP
VAIVNLKEYDPDDNLIGEIASKNVCAFLVATYTDGRPTESAEWFCKWLEEAANDFRFGKT
YLKGLRYAVFGLGDSAYQSHFNKVGTNVDKWLWMLGAKRVLTRGEGDRNAVQSKHGSIEA
DFTAWKTKFTSRLQALQSGEKMACSGDCKRGKCESSQPGSGEVLPHLQGDRHPRDAEEEE
PCESSSEEESGNQDYQSLNSVVDVEDLGNIVSPMKKEKREKAPQEEKAGMRRSSERNEDS
EGRAMITPALREALTKQGYQLIGSHSGVKLCRWTKSMLRGRGGCYKHTFYGIESHRCMEA
TPSLACANKCVFCWRHHTNPVGTEWRWKMDQPELIVKEAIENHQNMIKQFKGVPGLKAER
FEEGMEVKHCALSLVGEPIMYPEINRLLKLLHQQGISSFLVTNAQFPEEIRNLTPVTQLY
VSVDASTKDSLKKIDRPLFKDFWQRFLDSLKALAAKQQRTVYRLTLVKSWNVDELQAYAE
LVSLGNPDFIEVKGVTYCGESAASSLTMANVPWHEEVVRFVQELVALLPDYEIACEHEHS
NCLLIGHKKFKVSGEWWTWIDYSRFRELVLQYEESGGAKTFSASDYMARTPRWALFGARE
RGFDPKDTRYQRKNKAKDVSGC
NT seq
2229 nt
NT seq
+upstream
nt +downstream
nt
atgcccgcgcactctgactttgctgtgacctgcggggcttgggctccgcggaggatgggg
cctcctgtcgacgtgtgggacttttcttcacctttactgctactatggatgaataggttc
tacatctacctgggctgtgctctgggagtcaccctttggatctgtgtccaggttgtcatc
aagaaacaggtcattcgctcccaggagagaagcttcccaggtgcccccgacggctctccc
tcccttcagcagaagcagacccacgtatctggagtgaagattttctacgggtcgcagacc
ggcactgccaagggatttgcagtgactctggctgaagcagttacctctctggacctgcct
gtggccattgttaacttgaaggaatacgatccagacgacaatctgataggggagatcgct
agtaaaaatgtctgcgccttcctggttgctacttacacagacggccgccctaccgagagt
gcggagtggttctgcaagtggttggaggaagctgctaatgacttccgcttcggcaagact
tacctgaagggtctgagatacgcagtgtttggcttgggagactctgcctaccagagccac
ttcaacaaggtcggcacgaatgttgacaagtggctttggatgctcggcgccaaacgggtg
ctcacccgaggcgagggagaccgcaacgcggttcagagcaaacatggcagcatcgaggct
gacttcacagcctggaagaccaagttcacctcccggctgcaggccctgcagagcggggag
aaaatggcctgtagtggggactgcaagagagggaagtgcgagtcctcgcagcctggctca
ggagaggtgctcccacacctgcaaggcgaccgacatcccagggatgctgaggaggaggag
ccctgcgagagcagcagtgaggaggagtctgggaaccaggactatcagagcctaaattct
gtggttgatgttgaggacctcggcaacattgtgagccccatgaagaaggaaaagagagaa
aaggccccccaggaggagaaagctggcatgaggaggagctcagagaggaatgaagacagc
gaaggaagagccatgataacgcctgccctccgagaggccctgactaagcaagggtaccag
ttgattggcagccactctggtgtgaagctttgcagatggacaaagtcaatgctgcggggc
agaggaggttgctacaagcacacgttctacggcatcgagagccatcgctgcatggaggcc
acccccagtttggcatgtgcaaataagtgtgtcttctgttggcggcaccacaccaatcct
gtgggcactgaatggcggtggaagatggaccagccagaactgattgtgaaggaagccatc
gagaaccatcagaatatgattaaacagttcaaaggtgtgccagggcttaaggcagagcgt
tttgaagaggggatggaggtcaagcactgtgcgttgtcacttgtgggggagcccataatg
tacccagagatcaaccggcttttgaagctgctccaccagcaagggatctccagcttcctc
gtcaccaatgcacaattccccgaggaaatcaggaacctcacaccagttactcagttgtac
gtgagcgtggacgccagcaccaaagacagcctgaagaagatcgaccgcccgctcttcaaa
gatttctggcaacggttcctagacagtttgaaagctttagctgcaaagcaacagcgaaca
gtctacagactgacacttgtgaagtcttggaacgtggatgaactccaggcctatgcggaa
ctggtgtccttggggaaccctgacttcatcgaggtcaagggcgtgacctactgtggcgag
agtgcagccagcagcctcaccatggccaacgtaccctggcacgaggaagtggtccggttt
gtccaggagctggtggctctgcttcccgactatgaaatcgcgtgtgaacacgagcactcc
aactgcctcctgatcggacacaaaaagtttaaggtcagtggagagtggtggacatggatc
gattacagccgcttccgagagcttgtgctgcagtatgaagagagcggaggcgcaaagacg
ttcagcgcgagcgattacatggccagaactccacggtgggcactgttcggggccagggaa
agaggctttgatcccaaggacacgagataccagaggaagaacaaagcaaaagacgtttct
ggatgctga
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