Alexandromys fortis (reed vole): 126504479
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Entry
126504479 CDS
T08493
Name
(RefSeq) LOW QUALITY PROTEIN: PDZ domain-containing protein 7
KO
K21882
PDZ domain-containing protein 7
Organism
mfot
Alexandromys fortis (reed vole)
Brite
KEGG Orthology (KO) [BR:
mfot00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
mfot03037
]
126504479
04990 Domain-containing proteins not elsewhere classified [BR:
mfot04990
]
126504479
Cilium and associated proteins [BR:
mfot03037
]
Primary cilia and associated proteins
USH complex and associated proteins
126504479
Domain-containing proteins not elsewhere classified [BR:
mfot04990
]
PDZ domain-containing proteins
Other PDZ domain-containing proteins
126504479
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PDZ
PDZ_6
PDZ_2
Motif
Other DBs
NCBI-GeneID:
126504479
NCBI-ProteinID:
XP_050002809
LinkDB
All DBs
Position
Unknown
AA seq
1017 aa
AA seq
DB search
MARGFTVGFDPSGLGELSSGSLSSLSSRGHLGSDSGATATRYLLRKQQRLLNGPPRGIRA
SSPMGRVILINSPIEANSDESDVIHAVRVEKSSSGRLGFSVRGGSEHGLGIFVSKVEEGS
SAERAGLCVGDKITEVNGLSLESTTMGSAVRLLTSSSCLHMMVRRMGRVPGIKFSKEKTT
WVDVVNRRLVVEKCSSTPSDSSSEDGVRRIVHLYTTSDDFCLGFNIRGGKEFGLGIYVSK
VDHGGLAEENGIKVGDQVLAANGVRFDDISHSQAVEVLKGQTHIMLTIKETGRYPAYKEM
VSEYCWLDRLSNGVLQQLSQASESGSSVSSYASSAPCSSGSLPSDRMDVCLGPEEPSGCG
PGWGRADIAMQTEPDMGSHVETWCSVRPTVILRDTAIRSEGPSSTRRLDSALSESPKTAL
LLALSRPRPPITRSQSHLTLWEEKKQRKKEKSGSPGEKGALQRSKTLMNLFFKGGRQGRP
AGDGHREAWTLDSRSPAKVRPRLDLEKGGSVGPVQKFVTWRLRRDRERGRALLSARSGSP
SGQLPNVDEQVQAWESRRPLIQDLARRLLTDDEVLAVTRHCSRYVHEGGVEDLVRPLLAI
LDRPEKLLLLRDIRSVVAPTDLGRFDSMVMPVELEAFEALKSRAVRPSALRPTRQDTPPK
RHLITPVPDSRGGFYLLPVNDCSEDDHGEIRERLGGLKVSLSASAPRHHHKGIPPLQDVP
VDAFSPHRSACTPPPQPPPVAPRPPRPNWLLTEPPSKEEVQQNQSQTPAQSRSRSRSRGR
GKSPGRRSSPSPAPITTATTANGRYHRPRKARPSLPRPLDGQEAKVEARQGPLENGVNGM
AEETTRKASTGELRTVTLSKMKQSLGISISGGIESKVQPTVKIEKIFPGGAAFLCGALQA
GFELVAVDGESLEQVTHQRAVDTIRRAYRNKAREPMELVVRVPGPGLLPLSSASLAFKDQ
SLPADNSSAHGPLDNTPAQLPPPEAGQLQQTLSPALQAPHSTSKLSPLKGSHDPSHY
NT seq
3054 nt
NT seq
+upstream
nt +downstream
nt
atggcacgtggtttcacagtgggctttgacccatcgggtctaggagaactgagctctggc
tctctgagctccctctcctcccgaggccatctgggcagcgactcgggcgcaacagcaaca
cgatacttgctgaggaagcaacagcgcctactgaatgggcccccccgcggaatccgagcc
tcatcacccatgggccgagtcatcctcatcaactcccccattgaagccaacagtgatgag
agtgacgtcatccatgcagttcgggtggagaagagctcctctggaaggctgggtttcagt
gtgagaggcggctccgagcatggcctgggcatctttgtcagcaaggtggaggaggggagc
agtgcagagcgggctggcctgtgtgtgggggacaagatcacggaggtgaatggactaagc
ctggagagcaccaccatgggcagtgccgtgaggctgctgaccagcagcagctgcctgcac
atgatggtgcggcgcatgggccgtgtgcctggcatcaagttctccaaggagaagaccaca
tgggtggatgtagtgaaccggcggctggtggtggagaagtgcagttcgacaccatcggac
agcagctcagaagacggtgtgcggcgtatcgtccatctctacacgacctccgatgacttc
tgcctaggcttcaacatccgcgggggcaaggagtttggtcttggcatctacgtgtctaaa
gtggaccatggtgggctggccgaggagaatggcatcaaagtgggggaccaggtcctggcg
gccaacggtgtcaggttcgatgacatcagccacagccaggccgtggaggtgctgaagggc
caaacgcacataatgttgaccatcaaggagaccggccggtaccctgcctacaaagagatg
gtttctgagtactgctggctggatagattgagcaacggggtactgcagcagctgtcccaa
gcctcggagagtggttccagcgtctcctcctatgcctccagtgccccctgcagctcaggc
tcactgccctctgaccgcatggatgtctgtctggggcccgaggagcccagtggctgtggt
ccaggctggggacgggcagacatcgccatgcagactgagcccgatatgggcagccatgtg
gaaacttggtgcagcgtccggccaaccgtcatcctcagggacacggccatccgttctgaa
ggtccctcttctacccgacgccttgattctgcactttcggagtcgcccaagactgctctg
ctgctggccctcagccgacccaggcctcccatcacacggtctcagagccacttgacgctg
tgggaggagaagaaacagcggaagaaggagaagtcagggtcccctggggagaagggggcc
ttgcagcgctccaagacactgatgaacctcttcttcaagggagggcggcaggggcggcca
gcaggggacgggcacagagaggcctggacactggacagcagaagccccgctaaagtccgc
cctcgcctggacctggagaaaggagggagcgtgggacctgtgcagaagtttgtcacctgg
agactgagacgtgatcgggagaggggccgggccctgctctctgccaggtctggaagcccc
tctggccagctgcccaatgtggatgagcaggtgcaggcctgggaaagtcgacggcccctc
attcaggacctggcccggcgactgctgacagacgatgaagtactagcggtcactcgccac
tgctcccggtatgtccatgaaggtggcgtggaggacctggtgcgccccctgctggccatc
ctggacaggccagagaagctgctgctgctgagggacatcaggagtgtggtggcccccacg
gacctcggccgctttgatagcatggtgatgcccgtggagttggaggcttttgaggctctc
aagagcagggcagttcggccttctgctttgagaccaaccaggcaagacacgccacccaag
cgtcacctcatcacccctgtgcctgacagccgcggaggcttctacttgctgccagtgaat
gactgctcagaggacgaccatggcgagatccgggagaggctggggggccttaaggtctct
ctcagtgcctctgcccctcgccaccaccataaaggaatcccccctctacaagatgtacca
gtcgatgccttctctcctcatcgcagtgcatgtacaccccctccccagccgcctcctgtg
gctccccggcctcccaggcctaactggttactgacagaacccccaagtaaagaggaggtc
cagcagaaccagagccagaccccagcccaaagccgcagtcgcagccgcagccggggtcga
ggcaagtcccctgggcgcaggagctccccatccccagcgcccatcaccactgccaccaca
gccaacgggcgataccacaggcctcggaaggcaaggccctcgcttccacgacctctggac
gggcaggaggccaaagtggaagccaggcaagggcccttggagaatggagttaatgggatg
gccgaggagacgaccaggaaagcctccactggagagctgaggacagtcacgctatctaag
atgaagcagtctttgggcatcagcatctctgggggtatcgagtccaaggtgcagcccacg
gtgaagatagagaagatcttcccaggaggtgctgcgttcctctgcggggccctgcaggct
ggcttcgagctggtggcagtggacggagagagtctggagcaggtgacccaccaacgagct
gtggacaccatccgcagagcgtacagaaacaaggctcgggagcctatggagcttgtcgtc
agggtccctgggcctggcctgctgcccttatcctctgcttcattagccttcaaggaccag
agccttcccgctgacaattcctctgcccatggaccccttgacaataccccagcccagctg
ccaccccctgaggctgggcaactacagcagactctcagcccagcccttcaggctcctcac
agcacctccaaactctcccctcttaagggttcccatgacccttcccactactga
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