Alexandromys fortis (reed vole): 126504540
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Entry
126504540 CDS
T08493
Name
(RefSeq) LOW QUALITY PROTEIN: serine/arginine repetitive matrix protein 1-like
KO
K13171
serine/arginine repetitive matrix protein 1
Organism
mfot
Alexandromys fortis (reed vole)
Pathway
mfot03013
Nucleocytoplasmic transport
mfot03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
mfot00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
126504540
03015 mRNA surveillance pathway
126504540
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mfot03019
]
126504540
03041 Spliceosome [BR:
mfot03041
]
126504540
Messenger RNA biogenesis [BR:
mfot03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
126504540
Spliceosome [BR:
mfot03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
SR-related proteins
126504540
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PWI
Motif
Other DBs
NCBI-GeneID:
126504540
NCBI-ProteinID:
XP_050002860
LinkDB
All DBs
Position
Unknown
AA seq
466 aa
AA seq
DB search
MDAGFFRGTSAEQDNRFSNXQKKLLKQLKFAECLEKKVDMSKVNLEVIKPWITKRVTEIL
GFEDDVVIEFIFNQLEVKNPDSKMMQINLTGFLNGKNAREFMGPVPEPKEPSPEKNSKKE
KEKTRPRSRSRSKSRSRTRSRSPSHTRPRRRHRSRSRSYSPRRRPSPRRRPSPRRRTPPR
RLPPPPRHRRSRSPGRRRRRSSASLSGSSSSSSSSLSRSPPKKPPKRTSSPPRKTRRLSP
SASPPRRRHRPSSPATPPPKTRHSPTPQQLNRTRKSCVSASPGRTSGKVTKHKGTEKRES
PSPAPKPRKVELSESEEDKGSKMAAADSVQQRRQYRRQNQQSSSDSGSSSTSEDERPKRS
HVKNGEVGRRRRHSPSRSASPSPRKRQKETSPRGRRRRSPFPPPARRRRSPSPAPPPPPP
PPLRRRSPTPPPRRRTPSPPPRRRSPSPRRYSPPIQRRYSPSPPPK
NT seq
1398 nt
NT seq
+upstream
nt +downstream
nt
atggacgcgggattcttccgtggaacaagtgcggaacaggataatcggttcagcaactag
caaaagaaactcctcaagcaactgaaatttgcagaatgcctagaaaaaaaggtggacatg
agcaaagtaaatttggaggttataaagccttggataacaaaaagagtaactgaaatcctt
ggatttgaagatgatgttgtgattgagtttatattcaaccagctggaagtgaagaatcca
gattccaaaatgatgcaaatcaacctgactggatttttgaatgggaaaaatgctcgagaa
ttcatgggacctgtaccagagcccaaagaaccttctccagaaaaaaattccaaaaaggaa
aaggaaaagacccgaccaagatctcgatcacgttccaagtcacgatctcggacccgttct
cgatcaccttctcatactagaccaagacgacgacatcgatcccgatccagatcatactct
cctagaaggcggccaagcccaagaaggcgaccatcccctcgaagaagaactccgccaaga
cggctgcctcctccaccaaggcacaggaggagtaggtctccagggagacgaaggaggcgt
tcttccgcatcgttgtctggaagtagctcttcgtcctcttcatctctttcccggtcaccg
ccaaagaagcctcccaagaggacatctagcccccctagaaaaactcgtaggttatctcct
tcagcaagtcctccaaggcgaaggcacaggccatcgtctccagcaactccaccacccaaa
actcgccattctccaaccccccagcagttgaaccgcacaagaaaaagttgtgtttctgca
tctccaggaagaacttcgggtaaagtgacaaaacataaaggtactgagaaaagagaatcg
ccgtcaccagcacccaagccaagaaaagtggagctgtctgagtctgaagaagacaaaggc
agcaagatggctgcagctgattctgtgcagcagaggcgccagtacagacgacagaaccag
cagtcatcgtctgactctggctcctcttccacctcagaagatgagcggcccaagagatcc
catgtgaagaatggtgaggtaggcagacggcggagacattccccttctcggagtgcctct
ccatcacctcggaagcgccaaaaggagacttcccctcgtggtagaaggaggagaagtccc
ttcccaccaccagccagaaggcgaagatctccttctccagctcctcctcctcctccccct
cctcctctgcggcgcagatctcccaccccaccaccgcgacgaaggactccttctcctcct
ccacgccgccgctcgccttctccaagaagatactctcctcccattcagagaagatactct
ccttccccgcctccaaaa
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