Alexandromys fortis (reed vole): 126504570
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Entry
126504570 CDS
T08493
Name
(RefSeq) TAF5-like RNA polymerase II p300/CBP-associated factor-associated factor 65 kDa subunit 5L isoform X1
KO
K03130
transcription initiation factor TFIID subunit 5
Organism
mfot
Alexandromys fortis (reed vole)
Pathway
mfot03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
mfot00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
126504570
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mfot03021
]
126504570
03036 Chromosome and associated proteins [BR:
mfot03036
]
126504570
Transcription machinery [BR:
mfot03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
126504570
Coactivators
SAGA/TFTC/STAGA complex
126504570
Chromosome and associated proteins [BR:
mfot03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
PCAF complex
126504570
STAGA complex
126504570
TFTC complex
126504570
SAGA complex
126504570
SLIK complex
126504570
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_WDR5
WD40
Beta-prop_THOC3
Beta-prop_WDR3_1st
WD40_Prp19
WD40_WDHD1_1st
WD40_Gbeta
Beta-prop_WDR3_2nd
Beta-prop_CAF1B_HIR1
WD40_CDC20-Fz
Beta-prop_EML_2
Beta-prop_WDR36-Utp21_2nd
Beta-prop_TEP1_2nd
TFIID_NTD2
WD40_MABP1-WDR62_2nd
EIF3I
WDR55
Beta-prop_WDR90_POC16_2nd
Beta-prop_EML
Beta-prop_WDR36-Utp21_1st
Beta-prop_TEP1_C
Beta-prop_WDR75_1st
WD40_MABP1-WDR62_1st
Beta-prop_IFT122_1st
WDR90_beta-prop_4th
ANAPC4_WD40
Beta-prop_Aladin
Beta-prop_WDR41
Beta-prop_SCAP
Beta-prop_IFT140_1st
Beta-prop_RIG_2nd
NBCH_WD40
Tricorn_2nd
Beta-prop_SPT8
Beta-prop_DCAF4
Beta-prop_EIPR1
Beta-prop_Vps41
Beta-prop_HPS5
WD40_RFWD3
PEP5_VPS11_N
Beta-prop_WDR19_1st
PROPPIN
Beta-prop_IP5PC_F
WD_LRWD1
Ge1_WD40
Nbas_N
WDR54
Motif
Other DBs
NCBI-GeneID:
126504570
NCBI-ProteinID:
XP_050002910
LinkDB
All DBs
Position
Unknown
AA seq
589 aa
AA seq
DB search
MKRGRTEQVQVAVSCYLKRRQYMDSEGPLKQGLRLSQTPEEMAANLTVQSESGCANAVSA
APCQAEPQQYEVQFGRLRSFLTDSDSQHSHEVMPLLYPLFVYLHLNLVQSGPKSTVESFY
SRFHGMFLQNASQKDIIEQLQTTQTIQDILSNFQLRAFLDNKYVVRLQEDSYNYLIRYLQ
SDNNTALCKVLAVHIHLDVQPAKRTDYQLYASGGSSRSESSSLEPPDVPNPILQNEAALE
VLQESIKRVKDGPPSLTTICFYAFYNTEQLLNTAEISSDSKLLAAGFDNSCIKLWSLRSK
KLKSEPHLVDTSRIRLACDTLEEEENEEDNTGTEMKILRGHCGPVYSTRFLADNSGLLSC
SEDMSIRYWDLGSFTNTVLYQGHAYPVWDVDISPYSLYFASGSHDRTARLWSFDRTYPLR
IYAGHLADVDCVKFHPNSNYLATGSTDKTVRLWSAQQGNSVRLFTGHRGPVLALSFSPNG
KYLASAGEDQRLKLWDLASGTLFKELRGHTDSITSLAFSPDSGLVASASMDNSVRVWDIR
STSCNTPADGSSGELVGVYTGQMSNVLSVQFMACNLLLVTGITQENQEH
NT seq
1770 nt
NT seq
+upstream
nt +downstream
nt
atgaaacgagggcgcacggagcaggttcaggtggcagtgtcctgctacctcaaacgccgg
cagtacatggactcagaaggccccttgaagcaaggcctaagactatcacagactcctgag
gagatggcagccaacctcacagtccaatcagaatctggttgtgccaatgcagtgtctgca
gccccttgccaggcagaaccccagcaatatgaagtacagtttggacgactgagaagcttt
ctcactgattctgattcccagcacagtcatgaagttatgcctctcctctacccccttttt
gtctacctccacctcaacctggtccagagtggccccaaaagcacagtggaaagcttctat
agccgcttccatggaatgttcctacaaaatgcaagccagaaggacatcattgagcagctg
caaaccacacagaccatccaggacattctgtcaaacttccaacttcgtgcattcctggac
aataagtacgtggtccgtctccaggaagatagctacaactaccttatccgctacctccaa
agcgataacaacactgccctgtgcaaggtgcttgccgtgcacattcacctggacgtgcag
cctgccaagaggacagactaccagctgtatgccagtggtggctcctcgcgcagtgagagc
agcagcctggaaccaccagatgtgcccaaccctattctgcagaatgaggctgccctggaa
gtcttgcaggaaagtatcaagcgagtcaaggatggacctccttccctcaccaccatctgc
ttctatgccttctataacacagagcagctgctgaatactgcagagatctcctctgatagc
aaacttctggctgctggatttgacaattcctgcataaagctctggagcttgcggtccaaa
aagctgaaatcagagccccaccttgtggacacatctcgtatccgtctagcctgtgacact
ttggaggaggaggagaatgaggaagacaatacaggcacagagatgaagatcctgcgtgga
cactgtggcccagtatatagcacacggttcctcgcagacaactcggggctgctctcttgt
tctgaagatatgtccatcaggtactgggacctggggagcttcaccaacactgtgctctat
cagggacatgcctaccctgtgtgggacgtggacatcagcccctacagcctgtattttgcc
agtgggtcccatgaccgcaccgccaggctctggtcctttgatcggacgtacccgctgagg
atatatgcaggacacctggctgatgtggactgtgtcaaattccaccccaactcaaactac
ttggctacaggttccactgacaaaactgtccggctgtggagtgcccaacagggcaactca
gtgcggctcttcacagggcaccgaggtcccgtgctcgccctttccttctctcccaacggt
aagtacttggcgtcagctggtgaggaccagcggttaaagctgtgggacttggcctctggg
acactttttaaagaactgagaggccacacagacagtatcaccagtctggcctttagtcca
gacagtggtctggttgcctctgcctccatggacaactctgtgcgtgtctgggacatcaga
agcacatcctgcaacacacctgctgatggctcttcgggtgagcttgtgggcgtgtacact
ggacagatgagcaacgtcctgagtgtacagttcatggcctgcaacctcctcctggtgact
ggaatcacacaagagaatcaagaacattaa
DBGET
integrated database retrieval system
