Alexandromys fortis (reed vole): 126504857
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Entry
126504857 CDS
T08493
Name
(RefSeq) ATP-dependent DNA/RNA helicase DHX36
KO
K14442
ATP-dependent RNA helicase DHX36 [EC:
5.6.2.6
]
Organism
mfot
Alexandromys fortis (reed vole)
Pathway
mfot03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mfot00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
126504857
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mfot03019
]
126504857
03012 Translation factors [BR:
mfot03012
]
126504857
Enzymes [BR:
mfot01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
126504857
Messenger RNA biogenesis [BR:
mfot03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
126504857
Translation factors [BR:
mfot03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
126504857
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
OB_NTP_bind
DEAD
HA2_C
Helicase_C
AAA_22
HA2_N
AAA_19
nSTAND3
PhoH
AAA_14
ATPase
AAA_23
NPHP3_N
Motif
Other DBs
NCBI-GeneID:
126504857
NCBI-ProteinID:
XP_050003367
LinkDB
All DBs
Position
Unknown
AA seq
1004 aa
AA seq
DB search
MSYDYHQSWSRDAGPRGSGPGSGGGGGGNRGPGGGGGGGGGGRGGRGRHPGHLKGREIGL
WYARKQTQKNKEVERQERAVVHMDQRREEQIVQLLNSVQAKNDKESEAQISWFAPEDHGY
GTEVSSEKKNNSEKKLDNQEKKSLNQEKKTFRITDKSYIDRDSEYLLQENEPNGGLDQQL
LEDLQKKKSDPRYIEMQHFRKKLPSYGMQKELVNLINSHQVTVISGETGCGKTTQVTQFI
LDDYIERGKGSACRIVCTQPRRISAISVAERVAAERAESCGSGNSTGYQIRLQSRLPRKQ
GSILYCTTGIILQWLQSDSRLSSVSHIVLDEIHERNLQSDVLMTVIKDLLNFRSDLKVIL
MSATLNAEKFSEYFGNCPMIHIPGFTFPVVEYLLEDIIEKIRYVPEQKEHRSQFKRGFMQ
GHVNRQEKEEKEAIYKERWPAYIKELRTRYSASTVDVLERMDDDKVDLNLIAALIRYIVL
EEEDGAILVFLPGWDNISTLHDLLMSQVMFKSDKFLIIPLHSLMPTVNQTQVFKKTPPGV
RKIVIATNIAETSITIDDVVYVIDGGKIKETHFDTQNNISTMSAEWVSKANAKQRKGRAG
RVQPGHCYHLYNGLRASLLDDYQLPEILRTPLEELCLQIKILRLGGIAYFLSRLMDPPSN
EAVLLSIKHLMELSALDKQEELTPLGVHLARLPVEPHIGKMILFGALFCCLDPVLTIAAS
LSFKDPFVIPLGKEKVADARRKELAKETRSDHLTVVNAFEGWEEAKRRGFRYEKDYCWEY
FLSSNTLQMLHNMKGQFAEHLLGAGFVSSRSPKDPKANINSDNEKIIKAVICAGLYPKVA
KIRLNLGKKRKMVKVHTKSDGLVSIHPKSVNVEQTDFHYNWLIYHLKMRTSSIYLYDCTE
VSPYCLLFFGGDISIQKDNGQEVIAVDEWIVFQSPERIAHLVKGLRKELDILLQEKIEHP
HPVDWDDTKSRDCAVLSAILDLIKTQEKAIPRSLTPRSQEGYYS
NT seq
3015 nt
NT seq
+upstream
nt +downstream
nt
atgagctacgactaccaccagagctggagccgcgacgcggggccgcggggctccggcccg
ggctctggcggcggcggcggagggaaccgaggcccgggcggcggcggcggaggaggcgga
ggtggccgcgggggtcggggacggcatcccggacacctgaagggtcgcgagatcggcctc
tggtacgccaggaagcagacgcagaagaacaaggaggtcgagaggcaggagagagccgtg
gtacacatggatcaacgacgagaagagcaaattgtgcagctgttgaattctgtccaagct
aagaatgataaagagtcagaagcacagatatcctggtttgctcctgaggatcatgggtat
ggtactgaagtgtcttcagagaaaaaaaataactcagagaagaaattagacaaccaggaa
aagaaatcgctaaaccaagaaaaaaagacttttaggatcacagacaaatcatacattgac
cgagattctgagtacttactgcaagaaaatgagccaaatggaggcttagaccagcaatta
ttagaagatttacaaaagaaaaaatctgaccctcggtatatagagatgcagcatttcaga
aaaaagctgccttcatatggaatgcaaaaggagctggtaaatttaatcaatagccatcag
gtaacagtaataagtggtgaaaccggctgtggcaaaaccactcaggttacgcaattcatc
ttggatgactacattgaaagaggaaaagggtctgcctgcagaatagtgtgtactcagccg
agaagaattagtgccatttcagttgctgagcgagtagctgcagaaagggcagagtcttgc
ggcagtggtaatagtactggataccagattcgtctccaaagtcggttgccaaggaaacaa
ggttctatcttatactgcacaacaggaatcattcttcagtggctccagtcagactcgcgt
ttgtccagtgttagccatattgtacttgatgaaattcatgaacggaatctacagtcagat
gttctaatgactgtcattaaagatcttctcaattttcgatccgacctgaaagtaatattg
atgagtgcaacactgaatgctgagaaattttcagaatattttggtaactgtccgatgata
catatacctggttttacttttccagttgtggaatatcttttggaagatatcattgaaaaa
ataagatatgttccagaacaaaaagaacatagatcccagttcaagaggggtttcatgcag
ggtcatgtaaatagacaagaaaaggaggaaaaagaagcaatctataaagaacgctggcca
gcgtatataaaggagctgcgaacaagatactctgcaagtaccgtagatgttttggaaagg
atggatgatgataaagttgatctgaatttgattgctgcccttattcgatacattgttttg
gaagaagaggatggtgcaatactggtctttctaccaggctgggacaatatcagcacttta
catgatctcttgatgtcacaagtgatgtttaaatcagataaatttcttattataccttta
cattcattgatgcctacagtaaaccagacacaggtatttaaaaaaactccccctggcgtt
cggaaaatagtaattgctaccaacattgcagagactagcatcaccatagatgatgtggtt
tatgtaatagatggaggaaaaattaaagagacacactttgacacacagaacaacatcagt
accatgtctgctgagtgggttagtaaagctaatgccaaacagaggaaaggaagagcagga
agagttcagcctggtcattgttatcatctgtataatggccttagagcaagtcttctagat
gactaccagctaccagaaattttgagaactcctttggaagaactttgtttgcaaataaag
attttaaggctaggtggaattgcttattttctgagtaggttaatggatccaccatcaaat
gaagcagtattgctctccataaaacacctaatggaactgagcgctttggataagcaagaa
gaattaacacctcttggtgtccatttagcccgattacctgttgagccacatattggaaaa
atgattctttttggagctttattctgttgcttagatccagtcctcactattgctgctagt
ctcagctttaaagatcccttcgtcattccattgggaaaagaaaaggttgccgatgcaaga
agaaaggagttggcaaaggagactagaagtgatcacctgacagttgtaaatgcatttgag
ggttgggaagaagctaagcgacgtggtttcagatacgaaaaagactactgctgggaatat
tttctgtcttcaaacacgctgcagatgctgcacaacatgaagggacagtttgctgagcat
cttcttggagctggatttgtaagcagtagaagtcccaaagatcctaaagctaatataaat
tcagataatgagaagataattaaagctgtcatctgtgccggtttatatcccaaagttgct
aaaatccgactaaatttgggtaaaaaaagaaaaatggtaaaagttcacacaaagtctgat
ggtctggtttctattcatcctaagtctgtcaatgtggagcagacagacttccactataac
tggcttatctatcacctgaagatgaggacgagcagtatttacttgtacgactgtacagaa
gtttcaccatactgcctgctattctttgggggagatatttccatccagaaagacaatggt
caggaagttattgctgtagatgaatggattgtgtttcagtctccagaaagaattgcccac
cttgtgaaggggctaagaaaggaactggatatccttctgcaagagaagattgaacaccct
caccctgtagactgggacgacactaagtccagagactgtgcagtactgtcagctattcta
gacttgatcaaaacccaggaaaaggccattccaaggagcttgacaccacggtcacaggag
ggctattacagctga
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