Alexandromys fortis (reed vole): 126504901
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Entry
126504901 CDS
T08493
Name
(RefSeq) leucine-rich repeat protein SHOC-2
KO
K19613
leucine-rich repeat protein SHOC2
Organism
mfot
Alexandromys fortis (reed vole)
Pathway
mfot04014
Ras signaling pathway
mfot04519
Cadherin signaling
Brite
KEGG Orthology (KO) [BR:
mfot00001
]
09130 Environmental Information Processing
09132 Signal transduction
04014 Ras signaling pathway
126504901
09133 Signaling molecules and interaction
04519 Cadherin signaling
126504901
SSDB
Ortholog
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GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_14
LRR_1
LRR_LRWD1
LRR_9
LRR_At5g56370
LRR_13
LRR_NLRC4
Motif
Other DBs
NCBI-GeneID:
126504901
NCBI-ProteinID:
XP_050003442
LinkDB
All DBs
Position
Unknown
AA seq
582 aa
AA seq
DB search
MSSSLGKEKDSKEKDPKVPSAKEREKEAKASGGFGKESKEKEPKTKGKDAKDGKKDSSAA
QPGVAFSVDNTIKRPNPAPGTRKKSSNAEVIKELNKCREENSMRLDLSKRSIHILPPSIK
ELTQLTELYLYSNKLQSLPAEVGCLVNLMTLALSENSLTSLPDSLDNLKKLRMLDLRHNK
LREIPSVVYRLDSLTTLYLRFNRITTVEKDIRNLPKLSTLSIRENKIKQLPAEIGELCNL
ITLDVAHNQLEHLPKEIGNCTQITNLDLQHNELLDLPDTIGNLSSLNRLGLRYNRLSAIP
RSLAKCCALEELNLENNNISTLPESLLSSLVKLNSLTLARNCFQLYPVGGPSQFSTIYSL
NMEHNRINKIPFGIFSRAKVLSKLNMKDNQLTSLPLDFGTWTSMVELNLATNQLTKIPED
VSGLVSLEVLILSNNLLKKLPHGLGNLRKLRELDLEENKLESLPNEIAYLKDLQKLVLTN
NQLTTLPRGIGHLTNLTHLGLGENLLTHLPEEIGTLENLEELYLNDNPNLHSLPFELALC
SKLSIMSIENCPLSHLPPQIVAGGPSFIIQFLKMQGPYRAMV
NT seq
1749 nt
NT seq
+upstream
nt +downstream
nt
atgagtagtagtttaggcaaagaaaaagactctaaagagaaagatcccaaagtgccatct
gccaaggaaagagaaaaagaggcaaaagcctctggaggttttgggaaagaaagcaaagaa
aaagaacctaaaaccaaagggaaagatgccaaagatggaaagaaggattccagtgctgcc
caaccaggggtggctttttcagttgacaatactatcaaaaggccaaatccagcacctggg
actagaaagaaatccagcaatgctgaggtaattaaggagcttaacaaatgccgggaagag
aactcaatgcgcttggacttatccaagcggtctatacatatactgccaccatcaattaaa
gagttgactcaactaacagaactttatttatacagtaacaaattgcagtccctcccagcg
gaggtggggtgtctagtaaatctcatgacactggctctcagtgagaattcactcactagt
ttgcctgactctcttgataacttgaagaagctgcggatgcttgatttacggcataataaa
ctgagagaaattccttcagtggtatataggctagactctctgactactctgtaccttcgc
tttaatcgtattactactgtggaaaaggacatcagaaacctgccgaagctcagcacgctc
agcatccgggagaacaaaatcaaacagcttcccgctgaaattggtgaattatgtaacctc
attaccctggatgtagctcacaatcaacttgaacaccttccaaaggagattggaaactgc
acacagataaccaaccttgacttgcagcacaatgaactactagacctcccagatacaata
ggaaacttgtccagtttaaatcgtcttggcctgagatacaatagattgtcagcaatacct
agatcattagcaaaatgctgtgcacttgaggagttaaacttagagaacaataacatttct
actctaccagagagtcttttatccagtcttgtaaaattgaatagcttgaccttagctaga
aattgcttccagttatatccagtgggaggtccatctcagttttccaccatctattccctc
aacatggaacacaatcgaatcaacaaaatcccatttggaattttctccagagctaaagtg
ttaagtaagctgaacatgaaggacaatcagttgacatcacttcctttggattttggaact
tggaccagtatggtagaattgaatttagccacaaatcagctcaccaagatcccagaggac
gtgtctggtcttgtttctctcgaggttctaatattatcgaacaatcttctaaagaagctt
ccccatggtcttggaaaccttagaaagttacgagaattagatctagaggagaacaaactg
gaatccttgcccaatgagattgcttatctcaaggatttgcagaaattagtcttgacaaac
aaccagttgaccactcttcccagaggtatcggtcacctcaccaacctcacacacctgggc
cttggagagaacctgcttactcaccttcccgaggaaattggcacactggaaaacctagaa
gaactgtatttgaatgacaaccccaaccttcacagcctcccttttgagctggctctctgc
agcaagctgtcaatcatgagtattgagaactgtccactcagtcacctcccacctcaaatt
gttgctggagggccttcattcattattcagtttttaaagatgcagggtccgtatcgtgcc
atggtctga
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