Alexandromys fortis (reed vole): 126505448
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Entry
126505448 CDS
T08493
Name
(RefSeq) mRNA-decapping enzyme 1B isoform X1
KO
K12611
mRNA-decapping enzyme 1B [EC:3.-.-.-]
Organism
mfot
Alexandromys fortis (reed vole)
Pathway
mfot03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mfot00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
126505448
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mfot03019
]
126505448
Messenger RNA biogenesis [BR:
mfot03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
126505448
mRNA degradation factors
5'-3' decay
Decapping complex
126505448
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DCP1
mRNA_decap_C
PilM
Motif
Other DBs
NCBI-GeneID:
126505448
NCBI-ProteinID:
XP_050004314
LinkDB
All DBs
Position
Unknown
AA seq
617 aa
AA seq
DB search
MAATAAGGLPGKGHDISLAALQRHDPYISRIVDVASQVALYTFFHRANKWEKTDVEGTLF
VYTRSASPKHGFTIMNRLSMENRTEPITKDLDLQLQDPFLLYRNATLSIYGIWFYDKEEC
QRIAKLMKNLTQCEQLKACHGAGAGSSPVSLSSGEGREVDILQMLTKAKDEYTKCKSCSE
PKQMTSSSAICDNPKLIKPVPVRPSSSQRLQEPLPNKTSDPEPQHLSLTALFGKQDKAPC
HETLKSSQTFVHHHHHHLHHHQHQQQEQLLVHQGVACSLPYEEPRKLSLPVEKQLCPAIQ
KLMVGSTRLHLLPQHPEQWLCESGSPSRVGGVPPCPVQLGSPWNGRTACCAQSTARCAQS
TCRNHKLLEQLQGASGAAHKCKPCAPARLSAATQVTPGQNAAPSQLVYFGGPLPPPTPGH
EALRKEQCALPAHALPFSGSQKSSPSVLPTQELLRKLQAVHQEQQLQAVPRPALAARFPV
SAQGSGTEKPLEAWASKTSSMEKQAPSLQITSAQCVPAPVTSLLMPPVVFTQSTCAPLRE
TESGLMPLGGQELPAASSSLLLPLQNWESSTVASRPLTRLQLQEALLNLIQNDDSFLSII
YETYLFSVTQAAMRKAT
NT seq
1854 nt
NT seq
+upstream
nt +downstream
nt
atggcggccactgccgccggtgggctccctgggaaggggcatgatatcagcctggcggcc
ctgcagcgccacgacccctacatcagtcgcatcgtggatgtggccagccaggtggctctg
tacactttcttccatcgggccaacaagtgggagaagactgatgtggaaggaaccttattt
gtttatacaaggtctgcctctccaaagcacggattcaccattatgaataggctcagcatg
gagaacaggacagaacccattactaaagacctggacctccagctccaggaccctttcctt
ctctacagaaatgccacattgtccatttatggaatttggttttatgataaggaagagtgc
caaagaattgcaaaattgatgaaaaacctcactcagtgcgaacagctgaaggcctgtcat
ggtgctggagcagggtcctccccagtgagcctgagttcaggagagggtagagaagtggat
atcttacagatgctcacgaaggccaaggatgagtacacaaagtgtaagagttgttctgag
ccaaaacagatgaccagctcttctgccatctgtgacaaccccaagcttatcaagcctgtg
cctgtgagacccagtagcagccagaggctgcaagagcccctacccaacaagacctcggac
cctgagccccaacacttatctttgacagctctgtttgggaaacaagacaaagctccctgt
cacgaaactctgaaatcttcccagaccttcgtccaccaccatcaccaccacctccaccac
caccagcatcagcagcaagaacagcttctagttcatcaaggagtcgcatgttccctgccc
tatgaagagcccagaaagctctcactcccagtggagaagcagctatgcccagccattcag
aaactcatggtcgggagcacaaggctgcacctgctgccacagcaccctgaacagtggctc
tgtgaaagtggcagccccagtcgtgtggggggagttcctccctgtcctgtccagctgggg
tccccctggaacggtaggactgcctgctgtgcacagagcactgcccgctgtgcccagagc
acttgcagaaaccacaagctactagagcagcttcaaggagcctctggggcagcgcacaag
tgtaagccctgtgcacctgccaggctgtctgcagccactcaggtgactccgggccaaaat
gcagccccgtcacagctggtgtacttcggcggcccccttcctcctcccacaccaggacat
gaagctctcaggaaggagcagtgtgcactcccagcacacgcgctgcccttctctggcagc
cagaagagcagccccagtgtgctccccactcaggagctgctgagaaagctccaggccgta
catcaggagcagcagctccaggcggtcccccggccagccttagcagccaggtttcccgtg
tcagcccagggctcagggacagaaaagcccttggaagcctgggccagcaagacatccagc
atggagaaacaggctccttctctgcagattacctcagctcagtgtgtccctgctccagtg
acttctctgctgatgccccctgtggttttcacacagtccacctgtgccccactgagggag
actgaatccgggctcatgcccctaggaggccaagaacttcctgctgcctcctccagcctc
cttctgcccctacaaaactgggaatcctccaccgtggccagcaggcccctcaccaggctg
cagctccaggaggcactgctgaacctcatccagaacgatgacagcttcttaagcataatc
tatgagacctatctcttcagtgtgacacaagcggccatgaggaaagccacgtaa
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