KEGG   Alexandromys fortis (reed vole): 126506198
Entry
126506198         CDS       T08493                                 
Name
(RefSeq) vascular cell adhesion protein 1
  KO
K06527  vascular cell adhesion molecule 1
Organism
mfot  Alexandromys fortis (reed vole)
Pathway
mfot04064  NF-kappa B signaling pathway
mfot04514  Cell adhesion molecule (CAM) interaction
mfot04518  Integrin signaling
mfot04668  TNF signaling pathway
mfot04670  Leukocyte transendothelial migration
mfot04933  AGE-RAGE signaling pathway in diabetic complications
mfot05143  African trypanosomiasis
mfot05144  Malaria
mfot05417  Lipid and atherosclerosis
mfot05418  Fluid shear stress and atherosclerosis
Brite
KEGG Orthology (KO) [BR:mfot00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04064 NF-kappa B signaling pathway
    126506198
   04668 TNF signaling pathway
    126506198
  09133 Signaling molecules and interaction
   04514 Cell adhesion molecule (CAM) interaction
    126506198
   04518 Integrin signaling
    126506198
 09150 Organismal Systems
  09151 Immune system
   04670 Leukocyte transendothelial migration
    126506198
 09160 Human Diseases
  09174 Infectious disease: parasitic
   05144 Malaria
    126506198
   05143 African trypanosomiasis
    126506198
  09166 Cardiovascular disease
   05417 Lipid and atherosclerosis
    126506198
   05418 Fluid shear stress and atherosclerosis
    126506198
  09167 Endocrine and metabolic disease
   04933 AGE-RAGE signaling pathway in diabetic complications
    126506198
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04515 Cell adhesion molecules [BR:mfot04515]
    126506198
   04090 CD molecules [BR:mfot04090]
    126506198
   04091 Lectins [BR:mfot04091]
    126506198
Cell adhesion molecules [BR:mfot04515]
 Immunoglobulin superfamily
  VCAM
   126506198
CD molecules [BR:mfot04090]
 Proteins
  126506198
Lectins [BR:mfot04091]
 I-type lectins (Siglecs)
  126506198
SSDB
Motif
Pfam: Ig_3 I-set ig C2-set Ig_2 V-set Ig_VEGFR-1-like_5th C2-set_2 ICAM1_3_5_D2 Ig_4 Ig_5 ICAM_N C2-set_3 Ig_6 Ig_PDGFR_d4
Other DBs
NCBI-GeneID: 126506198
NCBI-ProteinID: XP_050005561
LinkDB
Position
Unknown
AA seq 733 aa
MPEKMVTISGASTVLWILFAASQAFEVDISPEYRTMAQIGSSMSLTCKTTGCVSPSFSWR
TQIDSPLSAKMWKNETTSILTMDPVSFENEHFYVCTVYCGSVKQERGIQVDIYSFPKDPE
IQLSGPLEVGKPVMVKCLASDVYPSDRLEMELFKGDQLLKTEMFAEEMEKKSLETKSLEV
PFTPGLEDIGKALFCRANLYIEPEPQKRETGNTLQVYTSPKNTVISVHPSRSLQEGDAVT
MTCSSEGLPAPEIFWSKKLDNGNLKLLSGNATLTLVAMRTEDSGSYVCEGVNLVGRNKAE
VELTVQEKPLTVDISPGSWVAAQVGDSVVLTCAVVGCDSPTFSWRTQTNGSLNGEVRRAG
ATSTLTLSPVSFENENSYLCTVTCARRKLEKEIQVEVYSFPEDPEIEISGPLVHGRPVTV
NCTVPSVYPFDHLEIELLKGETTLKSKRFNEEMGIKSLETKSLEMTFIPTSEDTGNELVC
LAKLHSGQMESEPKQRQSTQTLYVQVAPKETTIWVSPSPILKEGSPVNLTCSSDGFPAPK
ILWSRQLNNGELQPLSEDTMLTLMSTKLEDSGIYVCEGINQAGISKKSVELIIQGSPKDI
QLTAFPSESVKEGDTVIISCTCGSAPETWIILKKKAKTGDMVLKSIDGAYTIRKAQLQDA
GVYECESKTEVGSQLRSLTLDVKGSENIFSPELLALYCASSLIIPAIGVIIYFARKANMK
GSYSLVEAEKSKV
NT seq 2202 nt   +upstreamnt  +downstreamnt
atgcctgagaagatggtcacgatctctggagcctcaacggtactttggatactgtttgca
gcttctcaagcttttgaagtcgatatctcccctgaatatagaacaatggctcagattggg
agctccatgtccctgacttgcaaaaccacaggctgcgtgtccccatctttctcttggaga
acccagatagacagtccgctcagtgcgaagatgtggaaaaatgagaccacgtccatcctg
accatggatcctgtcagttttgagaatgaacacttttacgtgtgcacagtatactgcggc
tcggtgaaacaggaaagagggatccaggtggacatctactcattccctaaggatccagag
attcagctgagtggtcccctggaggttgggaagcctgtcatggtcaagtgtttggcctct
gatgtttacccatctgacagattggaaatggaactcttcaaaggtgaccaactcctgaag
acagagatgtttgcagaagagatggagaagaagtctctggaaaccaagagtttggaagtc
ccctttactcctggccttgaggatattgggaaagctcttttttgccgagctaacttatac
attgagcctgagccccaaaaaagggagacgggcaacacactgcaagtctacacctctccc
aagaatacagttatctctgtgcatccctccagaagtcttcaagagggtgacgctgtgacg
atgacctgttccagtgagggtctgccagctcccgagattttctggagcaagaaattagat
aatggaaatctgaagctcctctcaggaaatgcaactcttaccttagttgctatgagaacg
gaagattctggaagttacgtgtgtgaaggagttaatctggtcgggagaaataaagcagag
gtggaattaactgttcaagagaaaccattaactgtcgacatctcccccggatcctgggtg
gctgcgcaggttggagactcagttgtactgacatgcgctgttgttggctgtgactccccc
actttttcttggaggactcagacaaacggttcccttaacggggaggtgaggagagcgggg
gccacgtccacactgacactgagccccgtgagctttgagaacgaaaactcttacctgtgc
actgtgacctgtgctcggaggaagctggaaaaggaaatccaggtggaggtctactccttt
cccgaagacccagaaattgagatcagcgggccccttgtgcacgggaggcccgtcaccgta
aactgcacagtccctagcgtgtacccttttgaccatctggagattgagttgctgaagggg
gagaccacgctgaagagtaaacgctttaatgaggaaatgggcataaaatccttagagacc
aaaagtttggaaatgaccttcatccccaccagtgaagatactgggaacgagcttgtttgc
ctggctaagttacacagtggccaaatggaatctgaacccaaacaaaggcagagtacacag
actctttatgtccaagttgcccccaaggaaaccaccatctgggtcagcccctctcccatc
ctaaaggagggcagtcccgtgaacctcacctgctcaagcgatggctttccagctccaaaa
atcctgtggagcaggcagctgaataacggggaattgcaacctctttctgaagatacaatg
ctcactttaatgtctacaaaactggaagattctggcatttatgtgtgtgaagggattaac
caggctggaattagcaaaaaatcagttgaattgattatccagggctctccgaaagatata
caactcacagcctttccctctgagagcgtgaaggagggagacactgtcattatctcctgc
acatgtggaagtgcgccggaaacgtggatcatcctaaagaagaaagccaagacgggagac
atggtgttaaagtccattgatggcgcgtacaccatccgcaaggcccagctccaggacgct
ggagtgtacgagtgtgaatctaaaaccgaagttggctcacagctacgaagtttaaccctt
gatgtaaaaggaagtgaaaatattttttctcccgagctccttgccctctactgtgcttcc
tccttgataatacctgccatcggggtgatcatttacttcgcaagaaaagccaacatgaag
ggatcgtacagcctggtagaagcagagaaatcaaaggtgtag

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