Alexandromys fortis (reed vole): 126506299
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Entry
126506299 CDS
T08493
Name
(RefSeq) synaptopodin-2
KO
K24066
synaptopodin-2
Organism
mfot
Alexandromys fortis (reed vole)
Pathway
mfot04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
mfot00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
126506299
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
mfot04990
]
126506299
Domain-containing proteins not elsewhere classified [BR:
mfot04990
]
PDZ domain-containing proteins
Other PDZ domain-containing proteins
126506299
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
PDZ
Calsarcin
PDZ_6
PDZ_2
Motif
Other DBs
NCBI-GeneID:
126506299
NCBI-ProteinID:
XP_050005759
LinkDB
All DBs
Position
Unknown
AA seq
1262 aa
AA seq
DB search
MGTGDFICISMTGGAPWGFRLQGGKEQKQPLQVAKIRSQSKASDSGLCEGDEVVSINGNP
CADLTYPEVIKLMESITDSLHLLIKRPCSGTSETLDSETENTNHQHLTQEGPMESTTLQI
LPATNTQCKDFFLASVPSKVPLTEDQGNDWGYAECTTGEKIPQMLGSQEEHLVEEVILRE
KAEGGQPGRVVELQLSLSKERHQYASGPIVTLQGNENSKAPDPDWSSQHERTVHINSVAA
PEEEADSSLLPSTTSQTSSGRQLSVIQRTEAGGAGLPQVEVILDCSDRQKAEECRLQAGK
GCVASGVEGGRSEAPPSLVSFAVSPEGTEQGEDQRPGKDHSRPHKHRARHARLRRSESLS
EKQVKEAKSKCKSIALLLTDAPNPNSKGVLMFKKRRRRARKYTLISYGTGELEREEEEED
QEEGDKDEISEVAFLGTSESEVDEELLSDVDDDTQVVNFDWDSGLVDIEKKLSRGDKMEM
LPDTTGKGALMFAKQRERMEQFAAQNEEEKAGALPAREPDGLQTDGLRTVTSYQRKEEES
VRMQSSVSESSIQMGCSLGNVPQQNGFSGISETAGAPRMIPMNRTAKPFLGTMNQPTAPF
SPTRSVTSPMSDFPAPPPYSAVSPPPEAFSRGVASPITGPAQPPPWPQPAPWSQPAFYDS
SEQIASRDERIAVPAKRTGILQEARRRGTTKPMFTFKETKVSPNPELLSLLQNAEGKRGT
GAGGDSGPEEDYLSLGAEACNFMQSSAKQKTPPPVAPKPAVKSSSSQPVTPVSPVWSPGV
APSQRPAFSTSNLPNPPQVTAVSSIKIAQPSCPPARPASSLNLAGPFKGPQEAVVSQNYT
PKLSAPTPQVNAAHAGAGGPANELPGMSGKGAQLFAKRQSRMEKYVVDSDTVQAHAVRAQ
SPTPSLPASWKYSSNVRAPPPMAYNPIHSPSYPLAAIKSQPPTAQASKTSKKKGKKPLNT
LDVMKHQPYQLNASLFTFQPPGAKDSLPQKSTVKVTSGPAVKHALPPRQVNVGSPTNAQA
SSVYSVPAYPSQPSFFAEPTSPVSASPVPVSVPTSPKQESASSSYFVAPRPKFSAKKSGV
TVQASGRSLSLPGKPAPPNISASPWLYQPAHRYPSRPTLGLEKANKRPTPWEAAARSPLG
LVDDAFGPRSIQESIVANVVSAARRKACSGSQEDWKERLSFVSQTQKTNMSFPERQEYNA
PSPVSSLMSTHSVYSSQLPYVSPRQEFRYDPKIMPMETRSEYGLPLGGYNYNPHPRGWRH
QP
NT seq
3789 nt
NT seq
+upstream
nt +downstream
nt
atgggcactggagattttatctgcatttccatgactggaggggcgccctgggggttcagg
ctgcaaggaggcaaggaacagaagcagcccttgcaagtggcgaagattcgaagtcagagc
aaagcgtcagactccggcctgtgtgagggggatgaagtggtgtccatcaatggcaaccct
tgtgcagacctcacctaccctgaagtcatcaagcttatggagagcataacggactctctc
cacttgcttatcaaaagaccatgcagtggtacaagtgagactttggactctgaaacagaa
aacacaaaccatcagcatcttacacaggaggggcccatggaaagtaccaccttgcagatt
cttccagccaccaacacccagtgcaaagacttctttctcgcttcagtcccaagtaaagtt
cccctaaccgaggaccaaggaaatgattggggttatgcagaatgtacaacgggagaaaaa
attccccagatgcttggctcccaagaagaacacttggtagaggaggtcatcttaagagaa
aaggcagaaggcggccagccgggccgtgtggttgagctccaactgtccctctcaaaggaa
agacatcagtatgctagtggccctatagtgactctccagggaaacgagaactccaaggct
cctgacccagactggagctcacaacacgagaggaccgtccacatcaattcggtcgctgct
cctgaggaggaagcagactcttctctcctgcccagcacaacaagccagacctccagcggc
cggcagctgagcgtgatccaaaggacagaagcgggaggcgcagggctgccccaggtggaa
gtgattctggactgctctgacaggcagaaggcggaagagtgcaggctgcaggcaggaaag
gggtgtgtggcttctggggtggaaggagggcggtcagaagcacctccttctctggtctcc
tttgccgtctcaccagaaggcaccgagcagggggaagatcaacgcccgggaaaggatcac
agcagaccacacaaacacagggcgcgacatgctcggctcaggaggagcgaaagtctgtct
gagaagcaagtgaaagaagctaagtctaaatgcaaaagcatcgctctccttctaacagat
gctcccaaccccaactccaagggggtgttgatgtttaagaagcggaggcggagggcccgg
aagtacaccctaatcagttacgggactggcgagcttgaaagagaggaggaggaggaggac
caggaggaaggtgacaaggacgagataagtgaagtcgcatttcttggaacgagcgagtca
gaagtggatgaagagctactgtcggacgttgacgacgacacacaagttgtgaactttgac
tgggattctggactggtggacattgaaaagaaactgagccgaggggacaagatggagatg
ctgccagacaccacaggcaagggggcgctcatgtttgctaagcagagagagaggatggaa
cagttcgctgcccaaaacgaagaggagaaggcgggtgcgctgccagccagagaaccagac
gggctgcagacggacggtctgagaaccgtgacttcttatcaaaggaaggaagaggaatcc
gtgagaatgcagagctctgtgagtgaaagctccatccaaatgggctgtagtcttggcaat
gtgccacaacagaatggcttcagtggcatttctgagactgcaggggccccgaggatgatc
cctatgaatagaaccgccaagcccttcctgggaactatgaaccagccaacagcccccttc
tccccaacccggagtgtgactagccccatgtccgactttcctgccccgccaccttactct
gccgtctcacctccacctgaagccttctccagaggggtagcaagtccaatcactggccca
gcacagcccccgccatggccccagcctgctccatggtcacagccagcgttctacgattct
tctgagcaaatagcttctcgggacgagaggatcgcagtgccggcgaaaagaacaggcata
ctgcaggaagccagaaggcgaggcacaacaaaacccatgtttacattcaaagaaaccaaa
gtaagccccaaccctgagctcctgtcacttcttcaaaatgcagaaggtaagcgaggcact
ggagctggaggagactcggggccggaagaagactatctcagcttaggcgcagaggcttgt
aacttcatgcaaagttctgctaagcagaagaccccacctcccgttgctccaaagcctgca
gtcaagtcctcctcctcacaaccagtaaccccagtttctccagtctggtctccaggagtg
gctccatcccagcgtcctgccttctccacatcaaacctaccgaacccaccacaggtcaca
gctgtgtcctccatcaaaatagcccagccttcctgccctcctgcccggcctgcgagctca
ctgaacctggccggtcccttcaaagggccccaagaagcagtcgtcagtcaaaactacaca
cccaagctatcggcacccacaccgcaagtaaatgctgctcacgctggtgccgggggacca
gccaatgagcttcctggaatgagcgggaaaggagcccagctgtttgctaaaaggcagtca
aggatggagaagtacgtggtagattccgacacggtgcaggcccacgcagttcgggcccag
tcccctacgccatccctgccagccagctggaagtactcctcgaatgtccgagcaccccct
cctatggcctacaatccgattcattccccctcatacccactggctgctatcaagtctcag
ccacctaccgcccaggcctccaaaacaagcaagaaaaagggcaagaaaccgcttaacact
ttggatgtcatgaaacatcaaccgtatcagctcaacgcgtctctgttcaccttccaacct
cctggcgcaaaggatagcctccctcaaaagtcaacggtcaaggtcacctcaggcccggcc
gtgaagcacgcccttcctccccgacaggtgaatgttggctctcccaccaatgcgcaggct
tcatctgtgtactcggtaccggcctatccctctcagccctccttcttcgcggagcccacc
tcgcctgtgagcgcatccccagttcctgtgagtgttcccacctcgccgaagcaagaatcg
gcctcctcgtcctattttgtggcaccaaggccgaagttctcagccaagaaaagcggtgtc
acagtccaggcgagtggacgctccctttctcttcctggaaaaccagccccgcccaacata
tctgcatctccgtggctgtaccagccggctcaccgttaccccagcaggccgaccctcggg
ctggagaaagctaacaagagaccaacaccttgggaagcagcggctaggtctcctcttggt
ctagtggatgacgccttcggacccagaagcatccaggaatccattgtggcgaatgtagtc
tccgcagctcggaggaaggcatgctcagggtcccaagaggactggaaagagagactgtcc
tttgtctcccaaactcagaagaccaacatgagtttccctgaaaggcaagagtataatgct
ccctccccagtcagcagcctcatgtccacccactccgtatacagttcccagttgccatat
gtgagccctaggcaggagttcagatacgacccgaaaataatgcccatggagaccaggtct
gaatacggtcttccattaggtggctacaattacaacccacacccacgggggtggagacac
caaccatga
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