Microtus fortis (reed vole): 126506349
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Entry
126506349 CDS
T08493
Name
(RefSeq) ATP-dependent RNA helicase DHX15 isoform X1
KO
K12820
pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15/PRP43 [EC:
5.6.2.6
]
Organism
mfot
Microtus fortis (reed vole)
Pathway
mfot03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
mfot00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
126506349
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
mfot03041
]
126506349
03009 Ribosome biogenesis [BR:
mfot03009
]
126506349
Enzymes [BR:
mfot01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
126506349
Spliceosome [BR:
mfot03041
]
Complex A
U2 snRNP components
U2 related factors
126506349
Complex B
126506349
Complex C
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-SnRNP related factors
126506349
Ribosome biogenesis [BR:
mfot03009
]
Eukaryotic type
90S particles
Helicases
126506349
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
OB_NTP_bind
HA2_C
Helicase_C
HA2_N
DEAD
AAA_22
AAA_19
SRP54
nSTAND3
Atrophin-1
AAA_29
Flavi_DEAD
AAA_25
Motif
Other DBs
NCBI-GeneID:
126506349
NCBI-ProteinID:
XP_050005811
LinkDB
All DBs
Position
Unknown
AA seq
795 aa
AA seq
DB search
MSKRHRLDLGEDYPSGKKRAGTDGKDRDRDRDREDRSKDRDRERDRGDREREREKEKEKE
LRASTNAMLISAGLPPLKASHSAHSTHSAHSTHSTHSAHSTHTGHAGHTSLPQCINPFTN
LPHTPRYYDILKKRLQLPVWEYKDRFTDILVRHQSFVLVGETGSGKTTQIPQWCVEYMRS
LPGPKRGVACTQPRRVAAMSVAQRVADEMDVMLGQEVGYSIRFEDCSSAKTILKYMTDGM
LLREAMNDPLLERYGVIILDEAHERTLATDILMGVLKEVVRQRSDLKVIVMSATLDAGKF
QIYFDNCPLLTIPGRTHPVEIFYTPEPERDYLEAAIRTVIQIHMCEEEEGDLLLFLTGQE
EIDEACKRIKREVDDLGPEVGDIKIIPLYSTLPPQQQQRIFEPPPPKKQNGAIGRKVVVS
TNIAETSLTIDGVVFVIDPGFAKQKVYNPRIRVESLLVTAISKASAQQRAGRAGRTRPGK
CFRLYTEKAYKTEMQDNTYPEILRSNLGSVVLQLKKLGIDDLVHFDFMDPPAPETLMRAL
ELLNYLAALNDDGDLTELGSMMAEFPLDPQLAKMVIASCDYNCSNEVLSITAMLSVPQCF
VRPTEAKKAADEAKMRFAHIDGDHLTLLNVYHAFKQNHESVQWCYDNFINYRSLMSADNV
RQQLSRIMDRFNLPRRSTDFTSRDYYINIRKALVTGYFMQVAHLERTGHYLTVKDNQVVQ
LHPSTVLDHKPEWVLYNEFVLTTKNYIRTCTDIKPEWLVKIAPQYYDMSNFPQCEAKRQL
DRIIAKLQSKEYSQY
NT seq
2388 nt
NT seq
+upstream
nt +downstream
nt
atgtccaagcggcaccgtttggaccttggggaggattacccctccggcaagaagcgtgcg
gggaccgatgggaaagaccgggatagagatcgtgatagagaagaccgatctaaagatcgt
gaccgagaacgcgatagaggagatagagagcgggagagggaaaaagaaaaggaaaaggaa
ttgagagcttccaccaacgctatgcttatcagtgctggattgccgcctttaaaagcttct
cattccgctcattcaactcactcagctcattcaacacattctacacattctgcccattca
acacacactggacatgcgggacatacatcacttccacagtgcattaatccatttaccaac
ctgccccatacgcctcgatattacgatattctaaagaaacgacttcagctccctgtttgg
gaatacaaggataggtttacagatattcttgttagacatcagtcattcgtactcgttggt
gagactgggtctggtaagacaacacagataccacagtggtgtgtggagtatatgcgatca
ttgccaggacccaaaagaggagttgcctgtacacagcccagaagagtggctgcaatgagt
gtggctcagagagttgctgatgaaatggatgtgatgttaggccaggaagttggatactcc
attcgatttgaagactgcagtagtgcaaaaaccattcttaagtatatgactgatgggatg
ctacttcgtgaagccatgaatgatcccctcctggagcggtatggtgtgataattcttgat
gaggctcatgaaagaacattagctacagacattctcatgggtgttttgaaggaagttgta
agacaaagatcagatttaaaggttatagttatgagtgctaccctagatgctgggaaattc
cagatttactttgacaactgtcctctcttaactattcctggccgaacacaccctgttgag
attttttatactcctgaaccggagagagattatcttgaagcagcaattcgaacagtgatc
cagatacatatgtgtgaagaggaggaaggagaccttcttcttttcttgactggtcaagag
gaaattgatgaggcctgtaagagaataaagcgtgaagttgatgatttgggccccgaagtt
ggagatattaaaatcattccattgtattctacacttccaccccagcagcaacaacgcatt
tttgagccaccacctccaaaaaaacagaatggagcaattggaagaaaggtggttgtgtca
actaacattgcagagacctctttgacaatagatggtgtggtgtttgtgattgaccctgga
tttgcaaagcaaaaggtatataatcctagaatcagagttgagtctctcttggtgacagct
attagtaaagcttcagctcagcaaagggccggtcgagctggacgcaccagacctgggaaa
tgctttcgactttacacagagaaagcttataaaacagaaatgcaggataacacctatcct
gagattttgcgctctaatttaggatcagttgtattacaattgaagaagcttggtattgat
gatttggtacattttgattttatggacccaccagctcctgaaactctcatgagagcccta
gaacttctgaattacttggctgctttaaatgatgatggagatctaactgaattgggatcc
atgatggcagagtttcctctagatccacagcttgctaaaatggttattgcaagttgtgac
tacaactgttctaatgaggtcctatctattactgctatgttgtcagtcccacagtgtttt
gttcgccccacggaggccaagaaagctgcagatgaggccaagatgagatttgcccacata
gatggagatcatctgacactgctgaatgtctaccacgcttttaaacaaaatcatgaatct
gttcagtggtgttatgacaacttcattaactaccggtcgctgatgtctgcagacaatgta
cgccagcagctatcaagaattatggacagatttaatttgccccgtcgaagtactgatttc
acaagcagggactattatattaatataagaaaagcattggttactgggtattttatgcag
gtggcacatttagaacgaacagggcattacttaactgtgaaagataaccaggtggtccag
ttgcatccctctactgtgcttgatcacaagcctgaatgggtgctttacaatgagtttgtg
ctgacaacaaagaattacatccggacatgtacagacatcaagccagaatggttggtgaaa
attgcccctcaatattatgacatgagcaatttcccacagtgtgaagcaaagagacagttg
gaccgcattattgccaaacttcagtccaaggaatattcacagtactga
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integrated database retrieval system
