Alexandromys fortis (reed vole): 126506405
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Entry
126506405 CDS
T08493
Name
(RefSeq) protocadherin-7 isoform X1
KO
K16498
protocadherin delta 1
Organism
mfot
Alexandromys fortis (reed vole)
Pathway
mfot03273
Virion - Lassa virus and SFTS virus
Brite
KEGG Orthology (KO) [BR:
mfot00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03273 Virion - Lassa virus and SFTS virus
126506405
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
mfot01009
]
126506405
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
mfot04515
]
126506405
Protein phosphatases and associated proteins [BR:
mfot01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
126506405
Cell adhesion molecules [BR:
mfot04515
]
Cadherins
Protocadherins
126506405
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cadherin
Protocadherin
Cadherin_2
Cadherin_CELSR2_9th
Mid2
KIAA1549
Cadherin_pro
TMEM154
LYRIC
MLANA
Adeno_E3_CR2
EphA2_TM
Fibulin_C
Motif
Other DBs
NCBI-GeneID:
126506405
NCBI-ProteinID:
XP_050005897
LinkDB
All DBs
Position
Unknown
AA seq
1255 aa
AA seq
DB search
MLRMRTTGWVRGWCLGCCLFLPLCLSLAAAKQLLRYRLAEEGPADVRIGNVASDLGIVTG
SGEVTFSLESGSEYLKIDNLTGELSTSERRIDREKLPQCQMIFDENECFLDFEVSVIGPS
QSWVDLFEGRVIVLDINDNTPTFPSPVLTLTVEENRPVGTLYLLPTATDRDFGRNGIERY
ELLQEPGGGGGGGEGRRSGPADSAPYPGGGGHSASGGGPGGSKRRLEVPEGGGGTGPGGR
SSVFELQVADTPDGEKQPQLIVKGALDREQRDSYELTLRVRDGGDPPRSSQAILRVLITD
VNDNSPRFEKSVYEADLAENSAPGTPILQLRAADLDVGVNGQIEYVFGAATESVRRLLRL
DETSGWLSVLHRIDREEVNQLRFTVMARDRGQPPKTDKATVVLNIKDENDNVPSIEIRKI
GRIPLKDGVANVAEDVLVDTPIALVQVSDRDQGENGVVTCTVVGDVPFQLKPASDTEGDQ
NKKKYFLHTSAPLDYETTREFNVVIVAVDSGSPSLSSNNSLVVKVGDTNDNPPVFGQSVV
EVYFPENNIPGERVATVLATDADSGKNAEIAYSLDSSVMGTFAIDPDSGDILVNTVLDRE
QTDRYEFKVNAKDKGIPVLQGSTTVIVQVADKNDNDPKFMQDVFTFYVKENLQPNSPVGM
VTVMDADKGRNAEMSLYIEENSNIFSIENDTGTIYSTMSFDREHQTTYTFRVKAVDGGDP
PRSATATVSLFVMDENDNAPTVTLPRNISYTLLPPSSNVRTVVATVLATDSDDGINADLN
YSIVGGNPFKLFEIDPTSGVVSLVGKLTQKHYGLHRLVVQVNDSGQPSQSTTTLVHVFVN
ESVSNATVIDSQIVRSLHTPLTQDIAGDPSYEISKQRLSIVIGVVAGIMTVILIILIVMM
ARYCRSKNKNGYEAGKKDHEDFFTPQQHDKSKKPKKDKKNKKSKQPLYSSIVTVEASKPN
GQRYDSVNEKLSDSPSMGRYRSVNGGPGSPDLARHYKSSSPLPTVQLHPQSPTAGKKHQA
VQDLPPANTFVGAGDNISIGSDHCSEYSCQTNNKYSKQPFRRVTFSVVSQPQDPHQGSLQ
SCYDSGLEESETPSSKSSSGPRLGALPLPEDNYERTTPDGSVGEAEHMENDSRPLPDVAL
TGKCTRECDEYGHSDSCWMPVRTSPERKKSQPKLSTFMPVDERGSQEKLANGEAAIMGDR
NRNLLNKKLTSSYETFSAASFSKSEEANPEDIPLTKTGEYKPSPVNTLTRREVYL
NT seq
3768 nt
NT seq
+upstream
nt +downstream
nt
atgctgaggatgcggactacgggatgggtgcgcggctggtgcttgggctgttgcctcttt
ctgccgctctgccttagcctggccgccgccaagcagctgctccggtaccggctggcggag
gagggccccgccgacgtgcggatcggcaatgtggcctcggacctgggcatcgtgaccggc
tcgggcgaggtgactttcagccttgagtctggctctgagtacctgaagattgacaacctc
accggcgagctgagcaccagcgagcggcgcattgaccgagaaaaactgccccagtgtcag
atgatcttcgacgagaatgagtgtttcttggacttcgaggtatccgtgatagggccctcg
cagagctgggtggacctgtttgagggtagggtcatcgtgctggacatcaacgacaacacg
cccaccttcccgtcaccggtgctcaccctgacggtggaagagaaccggcctgtaggaacc
ctttacctgctgcccacggccaccgatcgtgacttcggtcgcaatggaatcgagcgctac
gagctgctccaggagcccgggggtggcggtggtggcggggaaggaagacgctcggggccg
gcggacagcgccccctacccagggggcggcgggcacagcgcgagcggcggcggccctgga
ggctccaagcgccggctggaagtgcctgagggtggcggcgggactggtcctggtggccga
agcagtgtgttcgagctgcaggtggcagacaccccagacggcgagaaacagccgcaactg
atagtgaagggggcgctggaccgggagcagcgagactcctacgagctgaccctccgagtg
cgcgatgggggcgatccacctcggtcctcacaggccatcttgagggtgctcatcaccgac
gtgaatgacaacagcccccgcttcgagaagagcgtttatgaggctgacctggctgagaac
agcgctccgggcacccccatcctgcaattgcgcgccgccgatttggacgtgggggtcaat
ggacagatcgagtatgtatttggggccgctaccgagtcggtaagaaggctactgcgtctg
gatgaaacgtccggttggctcagtgtcttgcaccgtattgaccgcgaggaagtgaatcag
ctgcgattcacagtcatggcccgtgaccgtgggcagccccccaagaccgataaggccacc
gtggtcctcaacatcaaagacgagaacgacaacgttccctccatcgaaattcgcaaaata
ggacgtatcccacttaaggacggggtggccaacgtggccgaggacgtcctggtggacacg
ccaatcgccctggtgcaggtgtccgaccgagatcaaggcgagaacggggtagtcacctgt
acggtagtgggagatgtgcctttccagcttaagccagccagcgacacagagggcgatcag
aacaagaaaaagtacttcctgcacacatcggccccactggactatgagaccacccgggaa
ttcaacgtggtcatagtagcggtggactctggcagtcctagcctctccagcaacaattcc
ctggtggtcaaggtgggagacaccaacgacaaccctcctgtctttggtcagtctgtggtt
gaggtttactttccagagaacaacattccaggtgagagggtagccactgtgctggcgaca
gacgccgacagtgggaaaaacgcagagattgcttactctctggactcctcagtgatgggg
acttttgccatagatcccgattctggggacatcctggtcaatacagtcctggaccgggag
cagactgacaggtatgagtttaaagttaatgccaaagacaaaggcatccctgtgctgcag
ggcagcaccacggtgattgtacaggtggctgataaaaacgacaacgatcctaagtttatg
caggacgtctttaccttttacgtgaaggaaaacttgcagcccaacagccctgtgggaatg
gtcaccgtgatggatgctgacaagggacggaatgcagagatgagcctgtacatagaggag
aacagtaacattttttctattgaaaatgacacagggaccatttactccacaatgtctttt
gacagggaacatcagactacatacactttcagagtgaaggctgtggatgggggagatcct
cccagatcggccacagccacagtctccctctttgtgatggatgaaaatgacaacgctccc
acagttacccttcccagaaacatttcctacacgttgctgccaccttcaagtaatgtcagg
acagtagtagctacagtgctggcaacagacagtgatgatggcatcaatgcggacttgaac
tacagcattgtgggagggaatcctttcaagctgttcgagattgatcccaccagtggtgtg
gtttctttagtaggaaaactcacccaaaagcactatggcttgcataggctggttgtgcaa
gtgaatgacagcggccagccttcccagtccactacaactttggtgcatgtatttgtcaat
gaaagtgtttccaacgcaacagtgatcgactcccagatagtcagaagtttgcacaccccg
ctcacccaggatatagctggtgacccaagctatgaaattagcaaacagagactcagtatt
gtcattggggtggttgctggcattatgacagtgattctaatcattttaattgtcatgatg
gcaagatactgcaggtccaaaaataaaaatggctacgaagctggcaaaaaggaccacgag
gacttttttacaccccagcagcatgacaaatctaaaaagcctaaaaaagacaagaaaaat
aaaaaatctaagcagccactctacagcagtatcgtcactgtcgaagcttctaaaccaaat
ggacagaggtatgatagtgtcaatgagaagctgtcagacagcccaagcatgggccgatac
agatcagttaatggtgggcctggcagtcccgacctggcaaggcattacaaatctagttcc
ccattgccaactgtccagcttcacccccagtcaccaactgcagggaaaaaacatcaggct
gtacaagatctaccaccagccaatacatttgtgggagcaggagacaacatttcaattgga
tcagatcactgctctgagtacagctgtcaaaccaataacaagtacagcaaacagccattt
cgtagagtgacgttttctgttgtgagtcagcctcaggacccacatcaggggtcactgcag
agttgctatgacagcgggctggaggagtcagaaacaccaagcagtaagagttcatcaggg
ccaagactgggtgcccttccactcccagaggacaactatgaaaggaccacgccggatggc
agtgttggtgaggcagagcatatggaaaatgattcaaggcctcttccagatgtagctctg
actggcaagtgcacccgtgaatgtgatgagtatggccactcagactcctgctggatgcca
gtgcgcacttcccctgagaggaagaagagccagcccaaactctccactttcatgcctgtt
gatgaacgaggaagccaggaaaagctggccaatggcgaagctgccatcatgggtgaccgc
aacagaaacctcctgaacaaaaagttgacctcatcctacgagaccttcagtgcagctagt
ttcagcaaaagtgaggaagccaaccctgaggatatccctttaacaaaaacaggggaatat
aagccatctcctgtcaacactctcactagaagagaagtttacctgtag
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