Alexandromys fortis (reed vole): 126506409
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Entry
126506409 CDS
T08493
Name
(RefSeq) replication factor C subunit 1 isoform X1
KO
K10754
replication factor C subunit 1
Organism
mfot
Alexandromys fortis (reed vole)
Pathway
mfot03030
DNA replication
mfot03410
Base excision repair
mfot03420
Nucleotide excision repair
mfot03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
mfot00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
126506409
03410 Base excision repair
126506409
03420 Nucleotide excision repair
126506409
03430 Mismatch repair
126506409
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mfot03032
]
126506409
03400 DNA repair and recombination proteins [BR:
mfot03400
]
126506409
DNA replication proteins [BR:
mfot03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
126506409
DNA repair and recombination proteins [BR:
mfot03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
126506409
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RFC1
AAA_lid_RFC1
BRCT
AAA
PTCB-BRCT
BRCT_2
RuvB_N
AAA_22
AAA_14
Rad17
AAA_5
AAA_17
AAA_16
AAA_30
AAA_33
AAA_18
Zeta_toxin
nSTAND3
AAA_7
RNA_helicase
NTPase_1
NPHP3_N
AAA_19
AAA_28
Motif
Other DBs
NCBI-GeneID:
126506409
NCBI-ProteinID:
XP_050005911
LinkDB
All DBs
Position
Unknown
AA seq
1146 aa
AA seq
DB search
MDIRKFFGVISSGKKPVNETVNKNEKIKPSAGTVKGKKGVKEVKVNNSCKDEASKPKQNN
KKKRIIYDSDSDSEETVQVKNAKKKSEKLPLSSKPGKISRKDPVTYVSETDEDDDFVCKK
ATSKAKENGVSTNSYLGTSNMKKNEENTKTKNKPLSPIKLTPTSVLDYFGTESVQRSAKK
MVASKRKESSQNMDDSRLSDEAIAKQLQLDEDAELERQLHEDEEFARTLAMLDEEPKTKM
ARKDPEEGESFSPLQADLSKAENHKSPNKAGHFLNERKTRSPAKPSKGGSSKGSEQPRSS
SAHQREAGSSPKASSKLALMKAKEESSYKDTEPMASRRKENAIELKGEKQTPKKTKSSPA
KKESVSPEDSEKKRTNYQAYRSFLNREGPKALGSKEIPKGAENCLEGLTFVITGVLESIE
REEAKSLIERYGGKVTGNVSKKTNYLVMGRDSGQSKSDKAAALGTKILDEDGLLDLIRTM
PGKKSKYEIAAEAEMKKEKSKLGKTPQKNDQGKRKISPTKKESESKKSKLTPQKCSPAKA
VKKEAHVFRRGLDFTEHEVKKMSGNSRAQGLAEDSSGNKVESLLWVDKYKPTSLKHIIGQ
QGDQSCAHKLLRWLRNWHKSSPEEKKHAKFGKLSSKDDGSSFKAALLSGPPGVGKTTTAS
LVCQELGYSYVELNASDTRSKNSLKAVVAESLNNTSIKGFYTSGAAPSVSSKHALIMDEV
DGMAGTEDRGGIQELIGLIKHTKIPIICMCNDRNHPKIRSLVHYCFDLRFQRPRVEQIKS
AMLSIAFKEGFKIPPPAMNEIILGANQDVRQVLHNMSMWCAQSKALTYDQAKTDSQRAKK
DIKLGPFDVARKVFAAGEETAHMSLMDKSDLFFHDYSIAPLFVQENYVHVKPVAAGGDMK
KHLMLLSRAADSICDGDLVDSQIRSKQNWSLLPTQAIYASVLPGELMRGYMTQFPSFPSW
LGKHSSTGKHDRIVQDLALHMSLRTYSSKRTVNMDYLSHIRDALVRPLTSQGVEGVQHVV
TLMDTYYLMREDFENIMEVSSWGGKPSPFSKLDPKVKAAFTRAYNKEVHLTPYSLQAVKT
SRLSTGPALDSEYHEESQEDDSQSDEKEQDAIETDAMIKKKTGSSKSSKPDKDKESKKGK
GRSWKK
NT seq
3441 nt
NT seq
+upstream
nt +downstream
nt
atggacattcggaaattctttggggttatatcaagtgggaaaaagcctgtaaatgagacg
gtaaacaagaatgagaaaataaaaccttctgcaggaactgtcaaaggaaagaaaggagta
aaggaagtcaaggttaacaattcctgtaaagatgaggcctccaaaccgaagcagaacaac
aagaaaaagaggatcatctatgattcagattcagactcagaggagacagtgcaggtaaaa
aatgctaaaaagaaatcagaaaaattgccactgtcttctaaacctggtaaaatttctcgg
aaggatcctgttacttacgtttctgagacagatgaagacgatgactttgtatgtaaaaag
gcaacctccaaagcaaaagagaatggagtatctacaaacagttaccttggaacatcaaac
atgaaaaagaatgaagaaaacaccaagactaagaataaacctttatcaccaataaaactt
acaccaacatcagtgcttgattattttggaactgaaagtgtccagagatccgctaagaag
atggtggcgagcaaaagaaaagagtcctctcagaacatggacgactccagattaagtgat
gaggcgattgccaagcagctgcagctcgatgaagacgcagagctggagaggcagctgcat
gaagatgaagagtttgctcgaacattagccatgttggatgaagagcccaagaccaaaatg
gcccgaaaggaccctgaagagggagaatcattttcacctctccaagctgatctaagcaaa
gcagaaaaccataagagccctaataaagcagggcatttcttaaatgaaagaaagacccgc
agtcctgctaagcccagtaagggtgggagctccaaaggatctgagcagccccgcagctca
tcagctcatcagagggaagccggttcctctcccaaggccagctccaagctggcacttatg
aaagcaaaagaagaaagttcttacaaagacacagagccgatggcctcaagaagaaaagaa
aatgccattgaactcaaaggagagaaacaaactcctaagaaaaccaaaagttccccagct
aaaaaagagtctgtaagtccagaagattctgaaaagaagcgcactaattatcaagcttat
cgaagcttcttaaatcgggaaggtcccaaagctctgggctccaaagaaatacccaaggga
gctgaaaattgcttggaaggcctgacatttgtgatcacaggcgtgctggagtccattgag
cgggaagaagccaagtctctgattgaacgttatggggggaaagtaacaggcaatgtgagc
aagaaaaccaactatctcgtcatgggccgggacagcggacagtccaagagtgacaaggca
gcagctctgggaacaaaaatccttgatgaagatggtctgttggatctgattcgaactatg
ccaggcaagaaatccaagtatgaaatagctgctgaagctgagatgaagaaagaaaagtcc
aaattggggaaaacaccccaaaaaaatgaccaaggaaaaagaaaaattagtccaaccaag
aaggagtcagagtctaaaaagagcaaactgactccccaaaagtgcagcccggcgaaggcc
gtgaagaaggaagcacatgtgtttcggaggggcctggacttcacggagcacgaggtcaag
aagatgtctggcaacagcagggctcagggtctggctgaggacagcagcgggaacaaagtg
gagagcctgctctgggtggacaagtacaagcccacctcgctcaagcacataatcggacag
caaggtgaccagagctgtgcccacaaactgctgcgctggctcagaaactggcataagagt
tctcccgaagagaagaaacacgcaaaatttggcaaactttccagcaaagatgatggttcc
agtttcaaggcagcattgctgtctggccctccgggtgttggcaaaaccactacagcttct
cttgtgtgtcaggaattgggctacagttacgtggaattaaatgcaagtgatactcggagt
aaaaacagtttgaaagcagttgttgctgagtcattgaacaacaccagcatcaaaggcttt
tatacaagcggagcagccccttcggtaagctcgaagcatgctctcatcatggatgaggtt
gatggcatggcaggcactgaggacaggggcggcattcaggaactcataggcctgataaag
catactaaaattcctatcatttgtatgtgcaatgatagaaatcatcccaaaattcgctct
ttggttcattattgttttgatcttcgtttccaaagacctcgggttgaacagattaagagt
gcgatgctgtctattgcatttaaagagggttttaagatcccccctccagccatgaatgaa
ataattttgggagcgaatcaagatgtcagacaggttttacataatatgagtatgtggtgt
gcacaaagtaaggcactaacgtatgaccaagccaagactgattctcagagggccaagaag
gacatcaaactgggcccctttgatgttgcccggaaggtgtttgcagctggagaggagact
gctcacatgtcactgatggacaaatcggatctctttttccatgactattccatagccccc
ctctttgttcaggagaactatgtccatgtaaagcctgtggctgcagggggtgacatgaaa
aagcacttgatgcttttaagccgggcggcagacagcatatgtgacggtgacttagtggac
agccagatccggagtaagcagaactggagtcttctgcccacacaggccatttatgccagt
gttcttcctggagagttgatgaggggctacatgactcagtttcccagcttcccaagctgg
ctggggaagcattcatctacgggcaaacatgaccggattgttcaggacctggccttgcac
atgagtcttagaacttactccagcaaaaggacggtgaacatggattacctgtcccacatc
agagatgcacttgtgcgacccttgacctcacaaggggtagaaggagttcagcatgttgtc
acacttatggacacatattatttaatgagagaagacttcgagaatatcatggaagttagc
agctggggtggcaagcccagtcccttttccaagctggatcctaaggtgaaagcagccttc
acaagagcttataataaggaggtccacctgaccccgtactcgcttcaggcagtaaagaca
tcgagactcagcacaggcccggcactggattctgagtaccatgaagagtcacaggaagat
gacagtcagtctgatgagaaggagcaggatgccatagagactgatgccatgatcaagaaa
aagacaggatcttcaaagtcttcaaaaccagacaaagataaggagtccaaaaaaggaaaa
ggaagaagttggaagaaatga
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