Alexandromys fortis (reed vole): 126506427
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Entry
126506427 CDS
T08493
Name
(RefSeq) pre-mRNA 3'-end-processing factor FIP1 isoform X1
KO
K14405
pre-mRNA 3'-end-processing factor FIP1
Organism
mfot
Alexandromys fortis (reed vole)
Pathway
mfot03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
mfot00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
126506427
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mfot03019
]
126506427
Messenger RNA biogenesis [BR:
mfot03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
126506427
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Fip1
Motif
Other DBs
NCBI-GeneID:
126506427
NCBI-ProteinID:
XP_050005956
LinkDB
All DBs
Position
Unknown
AA seq
604 aa
AA seq
DB search
MSAGEVERLVELSSGTGGDEEEEWLYGGPWDVHVHSDLTKDLDENEVERPEEENASANPP
AGIEEEAAENGVSKPKVTETEDDSDSDSDDDEDDVHVTIGDIKTGAPQYGSYGTAPVNLN
IKAGGRVYGNTGTKVKGVDLDAPGSINGVPLLEVDLDSFEDKPWRKPGADLSDYFNYGFN
EDTWKAYCEKQKRIRMGLEVIPVTSTTNKITAEDCTMEVTPGAEIQDDRFNLFKVQQGRT
GNSEKEAALPSTKAEFTSPPSLFKTGLPPSRNSTSSQSQTSTASRKASSSVGKWQDRYGR
AESPDLRRLPGAIDVIGQTITISRVEGRRRANENSNIQVLSDRSATEVDNNFSKPPPFFP
PGAPPTHLPPPPFLPPPPTVSTAPPLIPPPGIPITVPPPGFPPPPGAPPPSLIPTIESGH
SSGYDSRSARAFPYGNVAFPHLTSSAPSWPSLVDTTKQWDYYARREKDRDRDRDRDRDRE
RDRDRDRERERTRERERERDHSPTPSVFNSDEERYRYREYAERGYERHRASREKEERHRE
RRHREKEETRHKSSRSNSRRRHESEEGDSHRRHKHKKSKRSKEGKEAGSEPVPEQESAEA
APAE
NT seq
1815 nt
NT seq
+upstream
nt +downstream
nt
atgtcggccggcgaggtggagcgcctggtggagttgagcagcgggaccggaggggatgag
gaggaagagtggctgtatggcggcccctgggacgtgcatgtgcacagtgatttgacaaag
gatctagatgaaaatgaagttgaaaggccagaagaagaaaatgccagtgctaatcctcca
gctggaattgaagaggaagctgctgaaaatggcgtgtcaaaaccgaaagtaactgagaca
gaagatgatagtgacagtgacagtgacgatgatgaggatgatgtgcatgtcactatagga
gacattaaaactggagcaccacagtatgggagttatggaacagcgccagtaaatcttaat
atcaaggcagggggaagagtgtatggaaatacaggaaccaaagtcaaaggggtagacctt
gatgcacctggcagcattaatggagtgccactcttggaagtagatttggattcttttgaa
gataaaccatggcggaaacctggtgctgatctttctgattattttaattacggctttaat
gaagatacttggaaagcttactgtgaaaaacaaaagaggatccgaatgggacttgaagtt
ataccagttacttcaacaaccaataagattacggccgaagactgtactatggaagttaca
ccaggtgcagagatccaagatgacagattcaatctttttaaggtacagcaagggagaact
ggaaattcagagaaagaagcagcgcttccatctacaaaagctgagtttacttctccgcca
tcattgttcaagacgggcctgccaccaagcagaaacagcacctcttctcagtctcagaca
agtactgcctccagaaaagccagttcaagcgttgggaagtggcaggatcgatatgggagg
gccgagtcacccgatctaaggagattgcccggtgcaattgatgtcattggtcaaacaata
accatcagccgagtagaaggaaggcggcgggcaaacgaaaacagcaatatacaggtcctt
tctgacagatctgctactgaagtggacaacaatttcagcaaaccacctccatttttcccg
ccaggggctcctcctactcaccttccaccgcctccgtttctcccacctcctccaactgtc
agcactgctccgcctctgatcccacctccaggtattccaataactgtaccacctccaggt
ttccctcctccaccaggcgctccacctccatctcttataccaacaatagaaagtggccat
tcctctggttatgacagccgttctgcacgggcgtttccatacggcaatgttgccttcccc
catcttaccagttccgctccctcatggcctagccttgtggacaccaccaagcagtgggac
tattatgcacgaagagagaaagaccgagatcgagaccgagacagagacagagaccgagag
agagacagagaccgggacagagaaagagagcgcacccgagagagggagcgagagcgggat
cacagtcccaccccgagcgttttcaacagtgatgaggagcggtacagatacagggagtat
gcagaaagaggctatgagcgccatagagctagtcgggaaaaagaagagcgacacagagag
cgacgtcacagagagaaagaggaaaccagacacaagtcctctcgcagtaacagcagacgt
cgccatgaaagtgaagaaggggacagtcacaggagacacaagcacaaaaaatctaaaaga
agcaaagaaggaaaagaggctggcagtgagcccgtccctgaacaggagagtgctgaagct
gcccctgctgaatag
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