Alexandromys fortis (reed vole): 126506526
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Entry
126506526 CDS
T08493
Name
(RefSeq) exosome complex component CSL4
KO
K07573
exosome complex component CSL4
Organism
mfot
Alexandromys fortis (reed vole)
Pathway
mfot03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mfot00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
126506526
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mfot03019
]
126506526
Messenger RNA biogenesis [BR:
mfot03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
126506526
Prokaryotic type
Archeal mRNA degradation factors
Exosome components
Core exosome
126506526
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
EXOSC1
ECR1_N
RRP4_S1
Motif
Other DBs
NCBI-GeneID:
126506526
NCBI-ProteinID:
XP_050006156
LinkDB
All DBs
Position
Unknown
AA seq
195 aa
AA seq
DB search
MAPPVRYCIPGERLCNMEEGSPGSGTYTRHGYIFSSLAGCLTKTSENGALPVVSVMRETE
SQLLPDVGAVVTCKVFSINSRFAKVHILYVGSTPLKNAFRGIIRKEDIRATENDKVEIYK
SFRPGDIVLAKVISLGDAQSNYLLTTAENELGVVVAHSESGVQMVPISWCEMQCPKTHTK
EFRKVARVQPEFLQT
NT seq
588 nt
NT seq
+upstream
nt +downstream
nt
atggcaccacctgtgaggtactgcatccctggcgaacgtctgtgtaacatggaagaaggc
agccccgggagcggcacctacacccggcacggctacatcttttcgtcgctggcgggctgc
ctgacgaaaaccagcgagaatggcgcgcttcctgtggtgtctgtgatgagagaaacagag
tcccagctacttccagatgtaggagctgttgtcacatgtaaggtctttagcatcaactca
cgttttgccaaagtacacatcttgtatgtggggtccacaccactaaaaaatgcttttcga
ggaattatccgcaaggaagatatccgagcaactgaaaacgacaaggttgaaatttacaag
agtttccgcccaggtgacatagttttggccaaagttatctccctaggtgatgcacagtcc
aattacctgctgaccactgctgaaaatgagttaggggtagtggtagcccacagtgaatcg
ggtgtccagatggttcccatcagctggtgtgagatgcagtgccccaagacccacactaaa
gaattccgaaaagtggccagagtacagcctgagttcttacaaacctaa
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