Alexandromys fortis (reed vole): 126506815
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Entry
126506815 CDS
T08493
Name
(RefSeq) RNA-binding protein 39 isoform X1
KO
K13091
RNA-binding protein 23/39
Organism
mfot
Alexandromys fortis (reed vole)
Brite
KEGG Orthology (KO) [BR:
mfot00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
mfot03041
]
126506815
Spliceosome [BR:
mfot03041
]
Common components
Common spliceosomal components
General mRNP proteins
126506815
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RBM39linker
RRM_occluded
RBD_DEAH11
RRM_7
POP1_C
IHO1
Motif
Other DBs
NCBI-GeneID:
126506815
NCBI-ProteinID:
XP_050006616
LinkDB
All DBs
Position
Unknown
AA seq
530 aa
AA seq
DB search
MADDIDIEAMLEAPYKKDENKLSSANGHEERSKKRKKSKSRSRSHERKRSKSKERKRSRD
RERKKSKSRERKRSRSKERRRSRSRSRDRRFRGRYRSPYSGPKFNSAIRGKIGLPHSIKL
SRRRSRSKSPFRKDKSPVREPIDNLTPEERDARTVFCMQLAARIRPRDLEEFFSTVGKVR
DVRMISDRNSRRSKGIAYVEFVDVSSVPLAIGLTGQRVLGVPIIVQASQAEKNRAAAMAN
NLQKGSAGPMRLYVGSLHFNITEDMLRGIFEPFGRIESIQLMMDSETGRSKGYGFITFSD
SECAKKALEQLNGFELAGRPMKVGHVTERTDASSASSFLDSDELERTGIDLGTTGRLQLM
ARLAEGTGLQIPPAAQQALQMSGSLAFGAVAEFSFVIDLQTRLSQQTEASALAAAASVQP
LATQCFQLSNMFNPQTEEEVGWDTEIKDDVIEECNKHGGVIHIYVDKNSAQGNVYVKCPS
IAAAIAAVNALHGRWFAGKMITAAYVPLPTYHNLFPDSMTATQLLVPSRR
NT seq
1593 nt
NT seq
+upstream
nt +downstream
nt
atggcagacgatattgatattgaagcaatgcttgaggccccttacaagaaggatgagaac
aagttgagcagtgctaatggccacgaagaacgtagcaaaaagagaaaaaaaagcaagagc
cgaagtcgtagtcatgagcgaaagagaagcaaaagtaaggaacggaagcgaagtagagat
agagaaaggaaaaagagcaaaagccgggaacgaaagcgaagtagaagcaaagaaaggaga
cgaagccgctcacgaagtcgagatagaagattccgaggccgctacagaagtccctactcc
ggaccaaaatttaacagtgccatccgaggaaagattgggttgcctcatagcatcaaatta
agcagaaggcgttcacgaagcaaaagtccattcagaaaagacaagagccctgtgagggaa
cctattgataatctaactcctgaggagagggatgcaaggacagttttctgcatgcagctg
gcagcaagaattcgaccaagggatttggaagagtttttctctacagtaggaaaggttcga
gatgtgaggatgatttctgatagaaattcaagacgatccaaaggaattgcctatgtggaa
tttgttgatgttagctcagtgcctctagcaattggattaactggtcaacgtgttttagga
gtgccaataatagtacaggcatcacaggcagaaaaaaatcgagctgctgcaatggctaac
aatttacaaaagggaagtgctggacctatgaggctttatgtgggatcattacactttaac
ataactgaagatatgcttcggggcatctttgagccttttggaaggattgaaagtattcag
ctcatgatggatagtgaaacaggtcgatctaagggatatggattcattacattttctgat
tcagaatgtgccaaaaaagctttggaacagcttaatggatttgaactagctgggagacca
atgaaagttggtcacgttactgaacgaactgatgcttctagtgctagttcatttttggac
agtgatgaacttgaaaggactggaattgatttgggaacaactggtcgtctccaattaatg
gctagacttgcagagggtacaggtttgcagattccaccagcagcacagcaagcattacaa
atgagtggctctttggcatttggtgctgtggcagaattctcttttgttatagatttgcaa
acacgactttcccaacagactgaagcctcagctttagctgcagctgcatctgttcaacca
cttgcaacacaatgtttccaactttctaacatgtttaaccctcaaacagaagaagaagtt
ggatgggatacagagattaaagatgatgtgattgaagaatgtaataaacatggaggagtt
attcatatttatgttgacaaaaattcagctcagggcaatgtatatgtgaagtgcccgtct
attgctgcagctattgctgctgtcaatgcattgcatggcaggtggtttgctggtaaaatg
ataacagcagcgtatgtacctcttccaacttaccacaacctctttcctgattctatgaca
gcaacacaactactggttccaagtagacgatga
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