Alexandromys fortis (reed vole): 126506841
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Entry
126506841 CDS
T08493
Name
(RefSeq) probable ATP-dependent RNA helicase DDX27
KO
K13181
ATP-dependent RNA helicase DDX27 [EC:
5.6.2.7
]
Organism
mfot
Alexandromys fortis (reed vole)
Brite
KEGG Orthology (KO) [BR:
mfot00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
mfot03041
]
126506841
03009 Ribosome biogenesis [BR:
mfot03009
]
126506841
Enzymes [BR:
mfot01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
126506841
Spliceosome [BR:
mfot03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
126506841
Ribosome biogenesis [BR:
mfot03009
]
Eukaryotic type
Pre-60S particles
Helicases
126506841
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
UTP25_NTPase-like
AAA_22
PRK
Cas3-like_C_2
Motif
Other DBs
NCBI-GeneID:
126506841
NCBI-ProteinID:
XP_050006676
LinkDB
All DBs
Position
Unknown
AA seq
760 aa
AA seq
DB search
MLAELGFIGTIGEDDEVPVEPESDSGDDEEEGPIVLGRKQKALQKSRSADFNPDFIFTEK
EGMYDGSWALADVMSQLKKKRAATTLDEKIEKVRKKRKAEEKEAKSGKVEEKEGRASSDP
KGQEDLGGNEADSKDEDSETDYSSGDEEVLTKADTLKVKEKKKKKGQEAGGFFEDASEYD
KSLTFQDMNLSRPLLKAITAMGFKQPTPIQKACIPVGLLGKDICACAATGTGKTAAFALP
VLERLIYKPRQAAVTRVLVLVPTRELGIQVHSVTKQLAQFCSITTCLAVGGLDVKSQEAA
LRAAPDILIATPGRLIDHLHNCPSFHLSSIEVLILDEADRMLDEYFEEQMKEIIRMCSHH
RQTMLFSATMTDEVKDLASVSLKNPVRIFVNSNTDVAPFLRQEFIRIRPNREGDREAIVA
ALLMRTFTDHVMLFTQTKKQAHRMHILLGLLGLQVGELHGNLSQTQRLEALRRFKDEQID
ILVATDVAARGLDIEGVKTVINFTMPNTVKHYVHRVGRTARAGRAGRSVSLVGEEERKML
KEIVKAAKAPVKARLIPQDVILKFRDKIEKMEKDVYAVLQLEAEEKEMQHSEAQIDTAKR
LLEKGKETADQEPERSWFQTKEERKKEKIAKALQEFDLALRGKKKRKKFMKDAKKKGEMT
PEERSQFEILKAQMFAERLAKRNRRTKRARAMPEEEPAAGPAKKQKQQKKSVFDEELTNT
SKKALKQYRAGPSFEERKQLGLSRQRRGNFKSKSRYKRKK
NT seq
2283 nt
NT seq
+upstream
nt +downstream
nt
atgctggccgagctcggattcatcgggaccatcggcgaagatgacgaggtgccggtggag
cccgagtcggactccggggacgacgaggaggaggggcccattgtgctgggccgcaagcag
aaagcccttcagaagagccgtagtgctgatttcaaccctgacttcattttcactgagaag
gagggcatgtatgacggcagctgggccctggctgatgtcatgagccagctcaagaagaag
agggcagccaccaccctagacgagaagattgagaaagtacggaagaaaaggaaagcagag
gaaaaggaagccaagtctgggaaggtggaggagaaagaaggcagggcgagcagtgacccg
aaggggcaggaggatctgggagggaatgaggcagactccaaggatgaagactctgagact
gactactcctctggggatgaggaggtcctcaccaaagcagatacactcaaagtgaaggag
aagaagaagaagaagggccaggaagcaggaggattctttgaagatgcatctgagtatgac
aaaagcctcaccttccaggacatgaatctgtcccggcccctcctgaaggcaattacagcc
atgggcttcaagcagccgaccccgatccagaaggcgtgcatccctgtgggtctgctggga
aaagacatctgtgcctgtgcggccaccgggacaggcaaaactgcagcctttgcattgcct
gtcttggagcgtctgatctacaagccccgccaggctgcggtcactcgagtgctggtgcta
gtccctaccagagagctgggcatccaggtacactccgtcaccaagcagctggcccagttc
tgcagcatcactacctgcctggctgtgggtggcctggatgtgaagtctcaggaagctgct
ctccgggcagcaccagacatcctcattgccacacctggccggctcatcgaccaccttcac
aactgcccttccttccacctgagcagcattgaggtgctcatcctggacgaggctgacaga
atgctggatgaatattttgaggagcagatgaaggagatcattcgaatgtgttcccaccac
cgccagaccatgctcttctcagccaccatgacagatgaggtgaaagatctggcttcggtc
tccttaaagaaccctgtgcggatatttgtgaacagcaacacagacgtagctccctttctt
cggcaagagttcatacggatccggcctaacagggaaggggaccgggaagccattgtggca
gctctactgatgagaacgttcaccgaccatgtgatgctcttcacccagactaagaagcag
gcccaccgcatgcacattcttctggggctgctggggctgcaggtgggcgagctccacggc
aacttgtcacagacacagcgactggaggccctccggcgctttaaggatgaacagattgac
atcctggtggccacagacgttgccgcacgtgggcttgacatcgaaggtgtgaaaacagtg
atcaacttcaccatgcccaacactgtcaaacactatgtgcaccgggtggggcgaactgca
cgtgctggcagggctggacgctctgtctctctggtgggagaagaggaacggaagatgctg
aaggagattgtgaaggctgccaaggctccagtgaaggcacggctcatcccccaagatgtt
atcctcaaattccgggacaagattgagaaaatggagaaggatgtgtatgcggtgctgcag
ctggaggcagaggaaaaagagatgcagcattcagaggcccagatagacacagcaaagcgg
ctcttggagaaggggaaggagacggcagaccaggaacctgagaggagctggttccagacc
aaagaagagaggaagaaggagaagattgccaaggctctgcaggagtttgacttggcctta
agaggaaagaagaaaagaaagaagtttatgaaggatgccaagaaaaagggggagatgacg
ccagaggagaggtcccagtttgaaatcctcaaggcacagatgtttgcagagcggctggcc
aagaggaaccgcagaaccaagcgagcacgagcaatgcctgaggaagagcctgcagcaggt
cctgccaagaagcaaaagcagcagaagaagtctgtgtttgatgaagaactcaccaacaca
agcaagaaagccctgaaacagtatcgagctggcccttcttttgaagagaggaaacagtta
ggtctgtctcgccagagaagagggaacttcaaatctaagtccaggtataagagaaagaag
taa
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