Alexandromys fortis (reed vole): 126507063
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Entry
126507063 CDS
T08493
Name
(RefSeq) deoxynucleoside triphosphate triphosphohydrolase SAMHD1
KO
K22544
deoxynucleoside triphosphate triphosphohydrolase SAMHD1 [EC:3.1.5.-]
Organism
mfot
Alexandromys fortis (reed vole)
Pathway
mfot03250
Viral life cycle - HIV-1
mfot04623
Cytosolic DNA-sensing pathway
mfot05170
Human immunodeficiency virus 1 infection
Brite
KEGG Orthology (KO) [BR:
mfot00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
126507063
09150 Organismal Systems
09151 Immune system
04623 Cytosolic DNA-sensing pathway
126507063
09160 Human Diseases
09172 Infectious disease: viral
05170 Human immunodeficiency virus 1 infection
126507063
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mfot03400
]
126507063
DNA repair and recombination proteins [BR:
mfot03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factors
126507063
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SAM_2
HD
SAM_1
HD_assoc_2
PDEase_I
SAM_Ste50p
KinB_sensor
Motif
Other DBs
NCBI-GeneID:
126507063
NCBI-ProteinID:
XP_050007153
LinkDB
All DBs
Position
Unknown
AA seq
623 aa
AA seq
DB search
MAPLNGLASRAVASVRLRASRVPRYLISLRLDSQVAMRRADPEQPAKRPRCDGSPRTPPS
TRPAAANASPGSELHIDLPTWDVDDVCSFLEGEGFREQVLDSFRENKITGEFLPFLKGYL
LENLGVSSLEERRKMIACIQKLSQSHIELMKVFNDPIHGHIEFHPLLIRIIDTPQFQRLR
YIKQLGGGYYVFPGASHNRFEHSLGVGHLAGCVVRALAEKQPELQISERDILCVQIAGLC
HDLGHGPFSHMFDGRFMPVARPDRNWKHEQGSVDMFDHLVTSNNLKPIMRNYGLVPEEDI
PFIKEQICGPDQRTPIKDSLWPYKGRPVEKSFLYEIVANKRNGIDVDKWDYFARDCHHLG
IKNNFDYKRYVMFSRVCEVEDNKGGYKMKHICTREKEVGNLYDMFYTRNSLHRRAYQHKI
SNLIDIMIKEAFIKADPYVEIIGTDGEKRRISTAIDDMEAFTKLTDNIFLEILNSTDPRL
SEARNILRNIERRDLYKYLGETQPNGQHKIRKEDYEQLPQEIVNTKPDVCLEAQLKAEDF
IVDVSQLLPQKFAEQLIRVYCKKKDRKSLHAARQHFIQWCADKDFTKPQDGDIMAPLITP
LKWQNDDPDCHREASKAKTQLKF
NT seq
1872 nt
NT seq
+upstream
nt +downstream
nt
atggcaccgctaaatggactcgcctccagggcagtggcgtcagtgcgactgcgcgcgagc
cgggtgccgcggtacttaatttcgctgcgcctagactcgcaagtagccatgcggagagcg
gaccccgagcagcctgcaaagcggcctcgctgcgatggcagccccagaacgccgccgagc
acccgtcctgcagcggccaacgcgtctccgggctccgaactccacatcgacctcccgacc
tgggatgtggatgatgtgtgctccttcttggagggagaaggcttccgagagcaagtgctg
gacagcttcagagagaataagatcactggtgaatttctgccctttctcaaagggtatctt
cttgaaaatcttggagtaagttccttggaagagaggaggaagatgattgcatgtatccag
aaactgagtcagtctcacatagagctgatgaaggtatttaatgatcctattcatggccat
attgagttccaccctctccttatccgaatcattgacacacctcagtttcagcggcttcgc
tacattaaacagctgggaggcggctactatgttttcccaggagcttcacacaatcgcttt
gaacacagtctgggggttgggcacctagcaggctgcgtcgttcgagcactggctgaaaaa
cagccagagttgcagatcagtgagcgagatatcctttgtgttcagattgctgggctctgc
catgacctcggtcatgggccattttctcatatgtttgatggaagatttatgccagttgct
cgcccagatagaaattggaagcatgaacaaggctcagttgacatgtttgatcatctggtt
acttctaataacctcaaacctatcatgagaaactatggtctcgtccctgaagaagatatt
ccctttatcaaggaacaaatttgtggaccagatcaaaggacaccaatcaaagactctttg
tggccctataaaggacgtcctgtcgagaagagcttcctctatgagatagtggctaacaaa
agaaatggcatcgatgtggacaaatgggattattttgccagggactgtcaccatcttgga
atcaaaaataattttgattacaagcgctatgttatgttttcccgtgtctgtgaagtggaa
gacaataaaggtggctataagatgaagcacatctgtactagggaaaaggaggttggaaat
ctgtatgacatgttctacacacgcaacagcttacatcgcagagcttatcaacataaaatc
agcaacctcatcgatataatgatcaaagaggccttcatcaaagcagacccctacgtggag
attatagggaccgatggggagaagcgccgtatttctacagccattgatgacatggaagcc
ttcactaagctgacggataacatttttctggagattttaaactctactgatccacggttg
tctgaggcacgaaatattttaaggaacatcgaacgccgtgatctatacaagtatttgggt
gagacccagccaaacggtcagcacaaaattagaaaggaagattacgaacagcttccccaa
gagattgttaacaccaaacctgatgtgtgcctggaagcccaactgaaggccgaagatttc
atagtggatgtgtcgcagcttctgccacagaaattcgcagagcagctcatccgagtatac
tgtaagaagaaagacagaaagagcctacatgctgctcggcagcacttcattcagtggtgt
gcggacaaagacttcaccaaaccgcaggatggtgacatcatggccccacttataactcct
ctgaaatggcagaatgatgatccagattgccaccgagaagcatccaaagccaaaacacaa
ctaaaattttaa
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