Alexandromys fortis (reed vole): 126507434
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Entry
126507434 CDS
T08493
Name
(RefSeq) neogenin isoform X1
KO
K06766
neogenin
Organism
mfot
Alexandromys fortis (reed vole)
Pathway
mfot04350
TGF-beta signaling pathway
mfot04360
Axon guidance
mfot04514
Cell adhesion molecule (CAM) interaction
Brite
KEGG Orthology (KO) [BR:
mfot00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
126507434
09133 Signaling molecules and interaction
04514 Cell adhesion molecule (CAM) interaction
126507434
09150 Organismal Systems
09158 Development and regeneration
04360 Axon guidance
126507434
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
mfot04515
]
126507434
Cell adhesion molecules [BR:
mfot04515
]
Immunoglobulin superfamily
DCC/UNC5 family
126507434
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Neogenin_C
fn3
I-set
Ig_3
Ig_2
ig
Pur_ac_phosph_N
FN3_DSCAM-DSCAML_C
Fn3_VIN3
V-set
Interfer-bind
C2-set_2
Ig_5
fn3_2
fn3_SORL1
Tissue_fac
TMEM154
EphA2_TM
Herpes_UL74
TM_ErbB1
FAM176
Ig_PDGFR_d4
Motif
Other DBs
NCBI-GeneID:
126507434
NCBI-ProteinID:
XP_050007783
LinkDB
All DBs
Position
Unknown
AA seq
1478 aa
AA seq
DB search
MAAEREARRLLSTSSSRRCCPTPLLLLLLLPRLLLSGAAAVRSGSPPQSAGASVRTFTPF
YFLVEPVDTLSVRGSSVILNCSAYSEPAPKIEWKKDGTFLNLVSDDRRQLLPDGSLFISN
VVHSKHNKPDEGFYQCVATVDNLGTIVSRTAKLTVAGLPRFTSQPEPSSSVYAGNSAILN
CEVNADLIPFVRWEQNRQPLLLDDRVVKLPSGTLVISNVTEGDGGLYRCIVESVGPPKYS
DEAELKVLQGPEEIPNLVFLMRPSSVIRVTGQSAVLPCVASGLPSPVIRWMKNEEVLDTE
SSERLVLLAGGSLEITDITEDDAGTYFCIADNGNKTIEAQAELTVQAPPEFLKQPANIYA
HESMDIVFECEVTGKPTPTVKWVKNGDVVIPSDYFKIVKEHNLQVLGLVKSDEGFYQCIA
ENDVGNAQAGAQLIILEHDVAIPTLPPTSLTSATTDHLAPATTGPLPSAPRDVVASLVST
RFIKLTWRTPASDPHGDNLTYSVFYTKEGIARERVENTSQPGEMQVTIQNLMPATVYIFK
VMAQNKHGSGESSAPLRVETQPEVQLPGPAPNIRAHATSPTSITVTWETPLSGNGEIQNY
KLYYMEKGTDKEQDVDVSSHSYTINGLKKYTEYSFRVVAYNKHGPGVSTQDVAVRTLSDV
PSAAPQNLSLEVRNSKSIVIHWQPPSAATQNGQIIGYKIRYRKASRKSDVTETLVTGTQL
SQLIEGLDRGTEYNFRVAALTVNGTGPATDWLSAETFESDLDESRVPEVPSSLHVRPLVT
SIVVSWTPPENQNIVVRGYAIGYGIGSPHAQTIKVDYKQRYYTIENLDPSSHYVITLKAF
NNVGEGIPLYESAVTRPHTDTSEVDLFVINAPYTPVPDPTPMMPPVGVQASILSHDTIRI
TWADNSLPKHQKITDSRYYTVRWKTNIPANTKYKTANATTLSYLVTGLKPNTLYEFSVMV
TKGRRSSTWSMTAHGATFELVPTSPPKDVTVVSKEGKPRTIIVNWQPPSEANGKITGYII
YYSTDVNAEIHDWVIEPVVGNRLTHQIQELTLDTPYYFKIQARNSKGMGPMSEAVQFRTP
KALGSAGKGSRLPDLGSDYKPPMSGSNSPHGSPTSPLDSNMLLVIIVSVGVITIVVVVII
AVFCTRRTTSHQKKKRAACKSVNGSHKYKGNCKDVKPPDLWIHHERLELKPIDKSPDPNP
VMTDTPIPRNSQDITPVDNSMDSNIHQRRNSYRGHESEDSMSTLAGRRGMRPKMMMPFDS
QPPQPVVSAHPIHSLDNPHHHFHSSSLASPARSHLHHPSSPWPIGTSMSLSDRANSTESV
RNTPSTDTMPASSSQTCCTDHQDPEGATSSSYLASSQEEDSGQSLPTAHVRPSHPLKSFA
VPAIPPPGPPIYDPALPSTPLLSQQALNHHIHSVKTASIGTLGRSRPPMPVVVPSAPEVQ
ETTRMLEDSESSYEPDELTKEMAHLEGLMKDLNAITTA
NT seq
4437 nt
NT seq
+upstream
nt +downstream
nt
atggcggcagagcgcgaagccaggcgactcctcagcacctcctcctcccggcgctgctgc
cccacaccgctgctgctgttgctgttgctgccgcgactgctgctgtccggcgccgcggcc
gtgaggagcggctccccgccgcagtccgcaggagccagtgttcgaacatttactccattt
tattttctggtggagccagtggatacactctcagttagaggctcttctgttatattaaac
tgctcagcatattctgagcctgctccaaaaattgaatggaagaaagatggaactttttta
aacttagtatcagatgatcgccgccagcttctcccagatggatctttattcatcagcaat
gtggtgcattccaaacacaataagcccgatgaaggtttctatcagtgtgtagccactgtt
gataatcttggaactatcgtcagcagaacagccaagctcacagtagcaggtcttccgaga
tttaccagccaaccagaaccttcctcctcagtatatgctggaaacagtgcaattctgaat
tgtgaagttaatgcagatttaatcccatttgtaaggtgggaacagaatagacagcctctt
cttctggatgacagggttgtcaaacttccaagtggaacactggttatcagcaacgtgact
gaaggagatggaggactctaccgctgcatagttgaaagtgttgggccaccaaagtatagt
gatgaagctgaattgaaagttcttcaaggtcctgaggaaataccaaacttggtgtttttg
atgcgaccatcttctgtgatcagagttactggtcagagtgcagtgttgccatgtgttgct
tcaggacttccttctccagttattagatggatgaaaaatgaggaagtgcttgacacagaa
agctctgaaaggttggtcttgctagcaggaggtagtttggagattactgacatcactgag
gatgatgctgggacttatttttgtatagctgataatggaaataagacaattgaagctcag
gcagagcttactgtgcaagctccacctgaattcttgaaacaacctgctaacatatatgct
cacgaatctatggatattgtatttgaatgtgaagtcactgggaagccaactccaactgtg
aagtgggtcaagaatggggatgtggttatcccaagtgattattttaaaattgtaaaggaa
cataatcttcaagttttgggtctggtgaaatcagatgaagggttctatcaatgcattgct
gagaatgatgttggaaatgcacaagctggagcccagctgataatccttgagcatgatgtt
gccatcccaacattacctcccacttcactgaccagtgccactactgaccatctagcacca
gccacaactggaccactgccttcagctcctcgggatgtcgtggcctctctggtctctacc
cgctttatcaaattgacatggcgtacacctgcatcagatcctcatggagacaacctcacc
tactctgtgttctataccaaagaagggattgctagggagcgtgttgagaataccagtcag
ccaggagagatgcaggtgactattcaaaacttgatgccagcaactgtgtacatcttcaaa
gttatggctcaaaataaacatggttctggagagagttcagctcctctacgagtagaaaca
cagcctgaagttcagctccctggcccagcacctaatatccgagctcatgcaacgtcacct
acttctatcactgtcacatgggaaacaccactgtccggcaatggggaaattcagaattac
aagttgtactacatggaaaaagggactgataaagaacaggatgttgatgtttcaagtcac
tcctacactattaatggactgaaaaaatacacagagtatagtttccgagtggtggcctac
aataaacatggtcctggagtctccacacaagatgttgctgttcgaacattatcagatgtt
cccagtgcggctcctcagaatctgtccttagaagtgaggaattcaaagagtatagtgatt
cactggcagcccccttctgcagccacacaaaacgggcagattattggctacaagattcgt
taccgaaaggcctcccgaaaaagtgatgtcactgagaccttagtaactgggacacagctg
tctcagctgattgaaggtcttgatcgggggacagaatataacttccgagtagctgctctc
acagtcaatggtacaggaccagcaactgattggctgtctgctgaaacttttgaaagtgac
ctagatgaatctcgtgttcctgaagtgcctagctctcttcatgtccgtccacttgtcact
agcatcgtagtaagctggactcctccagagaaccagaacattgtggttcgaggttatgcc
atcggttatggcattggcagccctcatgcacagaccatcaaagtggactataaacaacgt
tattacaccattgaaaacctggatccaagctctcattatgtgattaccctgaaagcgttc
aacaatgttggcgaaggcatccccctttatgagagtgctgtgaccagacctcacacagac
acttctgaagttgatttatttgttattaatgctccatacactccagtgccagatcccact
cccatgatgccaccagtgggagttcaggcttccattctgagtcatgacaccataaggatt
acatgggcagacaactccctgcccaaacaccagaagattacagattcccgctactacaca
gtccggtggaagaccaacatcccagcaaacaccaagtataagactgcaaatgcaacaact
ttaagctatttggttactggcttaaagccgaatacattatatgaattctctgtgatggtg
accaaaggtagaagatcaagcacatggagtatgacagctcatggagctacgtttgaatta
gttcctacttctccacctaaagatgtgaccgttgtgagtaaagaaggaaaacctaggacc
ataatagtgaactggcagcctccctctgaagctaacggcaagattacaggttacatcatc
tattacagcacagatgtgaatgcagagatacatgactgggtcattgaacctgttgtggga
aacagactgactcaccagattcaagagttaacacttgatacaccatactacttcaaaatc
caggcccggaactccaaaggcatggggcccatgtctgaagctgtccagttcagaacacct
aaagccttaggatcggcaggaaaaggaagccgactgccagacctaggatctgactacaaa
cctccaatgagtggcagcaacagccctcatgggagccccacctctcctctagacagcaat
atgctgctggtcatcattgtctctgttggtgtcatcaccattgtggtggttgtgatcatc
gctgtcttttgtacccggcgtaccacttctcaccagaagaagaaacgagctgcctgcaaa
tcagtgaatggttcccataagtataagggcaactgcaaagacgtgaagcccccagaccta
tggatccatcatgagagactggagttgaagcctattgacaagtctccagatccaaaccct
gtcatgactgatactccaatccctcgaaactctcaagatatcacaccagtcgacaattcc
atggatagcaatatccatcaaaggcggaattcatacagagggcatgagtcagaggacagc
atgtctacactggctggaaggaggggaatgagaccaaaaatgatgatgccttttgactct
cagccacctcagcctgtggttagtgcccatcccatccattccctcgataaccctcaccac
catttccactccagcagcctcgcttctccagcccgcagccatctccaccacccaagcagc
ccatggcccattggcacatccatgtccctttcagacagggccaattccacagaatctgtt
cgaaatacccccagcacggacaccatgccagcctcctcatctcaaacatgctgcactgat
caccaggatcctgaaggtgctaccagctcctcttacttggccagctcccaagaggaagac
tcaggccagagccttcccacagcccacgttcgcccttcccatccattgaaaagctttgct
gtgccagcaatcccacccccaggacctcctatctatgatcctgcattgccaagcacacca
ttactgtcccagcaagctctgaaccaccacattcactcagtcaaaacagcctccatcggg
actttaggaaggagccggcctcctatgccagtggttgttcccagtgcccccgaagtacag
gagaccaccaggatgctggaagactccgagagtagctatgaaccagatgagctgaccaaa
gagatggcccacctggaaggactaatgaaggacctaaatgccatcacaacagcttga
DBGET
integrated database retrieval system
