Alexandromys fortis (reed vole): 126508227
Help
Entry
126508227 CDS
T08493
Name
(RefSeq) ubiquitin conjugation factor E4 B isoform X1
KO
K10597
ubiquitin conjugation factor E4 B [EC:
2.3.2.27
]
Organism
mfot
Alexandromys fortis (reed vole)
Pathway
mfot04120
Ubiquitin mediated proteolysis
mfot04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
mfot00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
126508227
04120 Ubiquitin mediated proteolysis
126508227
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
mfot04121
]
126508227
Enzymes [BR:
mfot01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
126508227
Ubiquitin system [BR:
mfot04121
]
Ubiquitin ligases (E3)
U-box type E3
126508227
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ufd2P_core
U-box
DUF4568
Motif
Other DBs
NCBI-GeneID:
126508227
NCBI-ProteinID:
XP_050009301
LinkDB
All DBs
Position
Unknown
AA seq
1173 aa
AA seq
DB search
MEELSADEIRRRRLARLAGGQTSQPSTPLTSPQRENPPGPPIPASAPGPSQSLGLNVHNM
TPATSPIGAAGVAHRSQSSEGVSSLSSSPSNSLETQSQSLSRSQSMDIDGVSCEKSMSQV
DVDSGIENMEVDENDRREKRSLSEKEPSSGPEVSEEQALQLVCKIFRVSWKDRDRDVIFL
SSLSAQFKQNPKEVFSDFKDLIGQILMEVLMMSTQTRDENPFASLTATSQPIATAARSPD
RNLMLNTGSNPGTSPMFCSLGSFGASSLSSLGASGGASNWDSYSDHFTIETCKETDMLNY
LIECFDRVGIEEKKAPKMCSQPAVSQLLSNIRSQCISHTALVLQGSLTQPRSLQQPSFLV
PYMLCRNLPYGFIQELVRTTHQDEEVFKQIFIPVLQGLALAAKECSLDSDYFKYPLMALG
ELCETKFGKTHPVCSLVASLPLWLPKSLSPGSGRELQRLSYLGAFFSFSVFAEDDAKVVE
KYFSGPTITLENTRVVSQSLQHYLELGRQELFKILHSVLLNGETREAALSYMAAIVNANM
KKAQMQADDRLVSTDGFMLNLLWVLQQLSTKIKLETVDPTYIFHPKCRINLPNDETRINA
TMEDVNEWLAELYGDQPPFSEPKFPTECFFLTLHAHHLSILPSCRRYIRRLRAIRELNRT
VEDLKSNESQWKDSPLAPRHREMLKRCKTQLKKLVRCKACADAGLLDESFLRRCLNFYGL
LIQLMLRILDPAYPDVTLPLSSDVPKAFAALPEFYIEDVAEFLFFIVQYSPQVLYEPCTQ
DIVMFLVVMLCNQNYIRNPYLVAKLVEVMFMTNPSVQPRTQKFFEMIENHPLSTKLLVPS
LMKFYTDVEHTGATSEFYDKFTIRYHISTIFKSLWQNIAHHGTFMEEFNSGKQFVRYINM
LINDTTFLLDESLESLKRIHEVQEEMKNKEQWDQLPRDQQQARQSQLSQDERVSRSYLAL
ATETVDMFHLLTKQVQKPFLRPELGPRLAAMLNFNLQQLCGPKCRDLKVENPEKYGFEPK
KLLDQLTDIYLQLDCARFAKAIADDQRSYSKELFEEVISKMRKAGIKSTIAIEKFKLLAE
KVEEIVAKNARAEIDYSDAPDEFRDPLMDTLMTDPVRLPSGTIMDRSIILRHLLNSPTDP
FNRQMLTESMLEPVPELKEQIQAWMREKQSSDH
NT seq
3522 nt
NT seq
+upstream
nt +downstream
nt
atggaggagctgagcgctgacgagattcgccggaggcgcctggcacgacttgctggtgga
cagacctcccaaccgagcaccccgcttacgtctccccagagggaaaaccctccgggacct
ccaatacctgcatcagccccaggcccttcccagagtcttggtctcaatgtccacaacatg
accccagctacctcccccataggtgcagcaggagttgcccatcggagccagagcagcgaa
ggagtcagctctctaagcagctcaccgtccaacagccttgagacacagtctcagtccctc
tcccgttcccagagcatggatatcgacggcgtctcctgtgagaaaagcatgtcccaggtg
gatgtggattcgggaattgaaaacatggaagtggatgagaatgaccgacgggagaaaagg
agcctgagcgaaaaggagccttcttcaggtcctgaagtgtccgaagagcaggccttacag
ctggtctgtaagatctttcgcgtctcctggaaggaccgggacagagatgtcatcttcctt
tcttctctttctgcgcagtttaaacagaacccaaaagaagtgttctctgattttaaggat
ctgattggccagattttaatggaagtgctgatgatgtccactcagacacgagatgaaaat
ccgtttgccagtctgacagccacatctcagcctattgccacggcagctcggtcacctgac
agaaatctcatgctgaacactggctccaatccaggaacaagccccatgttctgcagcctg
ggctccttcggcgccagctcgttgtctagtttgggagcctctggtggagcaagtaactgg
gattcgtacagtgatcatttcaccattgagacctgcaaggagacagacatgctgaactac
ctcatcgagtgttttgaccgagttggaatagaggaaaaaaaagcaccaaagatgtgcagc
cagccagcagtcagccagcttctgagcaacatccgctcgcagtgcatctcccacaccgcg
ctagtgctgcaaggttccctcacacagcccaggtccttgcagcagccgtccttcctcgtg
ccatacatgctgtgcaggaacctcccgtacggcttcattcaggagctggtgaggaccact
caccaggatgaagaggtgttcaagcagatctttatccctgttttacaaggcctggctctg
gctgccaaggagtgctctctcgacagtgactacttcaaataccccctcatggcactaggt
gaactctgtgaaaccaagtttgggaagacacaccctgtatgcagtttggtcgcctctttg
cccctgtggttgccgaagtctttaagccctggttctgggcgggagctgcagagactctcc
tacttaggggccttctttagcttctcggtctttgcggaggacgatgcaaaggtggttgag
aaatacttctcagggcccaccattaccctggagaacacccgtgtcgtcagccagtcacta
cagcattacctggagctgggacggcaagagcttttcaagattctgcatagtgtattgtta
aatggcgaaactcgtgaagcagctctcagttacatggcggccatcgtcaatgccaatatg
aagaaagcccagatgcaggcagatgatcggttggtgtccacagacggctttatgctgaac
ctcctttgggtcctgcagcagctaagtacaaagatcaagttagaaacagtcgaccccacg
tacatattccacccgaaatgtcggattaatctcccgaacgatgagacacggataaatgca
acgatggaggatgtgaatgagtggctggctgagctctatggagatcagcctccattttct
gagccaaaattccctacggaatgtttctttctcaccctgcacgctcaccacctctctatt
ctgcctagttgtcgtcgctacatccgcagactacgagctatccgagagctcaacagaact
gtggaagatttgaaaagtaacgaaagccagtggaaagattccccactggcccccagacac
cgagaaatgctgaagcgctgtaaaactcagcttaagaaactggtacggtgcaaggcctgt
gctgacgctggcttacttgacgagagcttcctgagaagatgtctgaatttttatggcctt
ctcattcagctgatgctgcgcatcctggaccctgcatatcccgacgtaacactgccttta
agttcagatgtccccaaggcgtttgcagcattgcctgagttttatatagaggatgttgct
gaatttttattttttattgtacaatactcgccccaggtgctgtatgagccctgtactcag
gacattgtgatgttcctcgtcgtcatgctgtgcaaccagaactacatccgcaacccatac
ctagtggccaaactggtggaggtcatgtttatgaccaacccctctgtccagcctcgaact
cagaagttttttgagatgattgaaaaccatcctctctctaccaaattgctggtaccttcc
ctcatgaaattttatacagatgtcgagcataccggagccaccagcgagttctatgacaag
ttcaccattcgctatcacattagcactatttttaagagcctttggcaaaacatagctcac
catggcaccttcatggaggagttcaattctggaaagcagttcgtccgctacatcaatatg
ctgataaacgacacgacctttctgctggacgagagtctggagtcgctgaagcggatccat
gaagtgcaagaggagatgaagaacaaggagcagtgggaccagctgccccgggatcagcag
caggcccggcaatctcagctttctcaggatgagcgcgtttcacgatcttatctcgcgctg
gcgactgaaaccgtggacatgttccatctcctcactaagcaagtccagaagccgttcctc
agaccagaacttggaccccgattagcagccatgctgaactttaacctccagcagctgtgt
ggccccaagtgccgggacctgaaagttgaaaacccggagaagtacggttttgagccaaag
aagctgttggaccaactgacggatatttacttgcagctggactgtgctcgctttgctaaa
gccattgctgatgaccagcgatcctacagcaaagagctgtttgaagaagtcatttcaaag
atgcggaaggcaggaatcaaatccaccattgcaatagagaagtttaagcttcttgctgag
aaagtggaggaaatagtggccaagaatgcacgggcagaaattgactacagcgacgcgccg
gatgagtttagagaccctctgatggacaccctgatgaccgaccctgtgagactgccctcg
ggcaccataatggaccgctccatcatcctgcggcatcttctgaactcccccactgacccc
ttcaaccgccagatgctgactgagagcatgctggaaccagtgccagagctgaaggagcag
attcaagcctggatgagagagaagcagagcagtgaccactaa
DBGET
integrated database retrieval system
