KEGG   Alexandromys fortis (reed vole): 126508397
Entry
126508397         CDS       T08493                                 
Name
(RefSeq) hypoxia-inducible factor 1-alpha isoform X1
  KO
K08268  hypoxia-inducible factor 1 alpha
Organism
mfot  Alexandromys fortis (reed vole)
Pathway
mfot04066  HIF-1 signaling pathway
mfot04137  Mitophagy - animal
mfot04140  Autophagy - animal
mfot04148  Efferocytosis
mfot04659  Th17 cell differentiation
mfot04919  Thyroid hormone signaling pathway
mfot05167  Kaposi sarcoma-associated herpesvirus infection
mfot05200  Pathways in cancer
mfot05205  Proteoglycans in cancer
mfot05208  Chemical carcinogenesis - reactive oxygen species
mfot05211  Renal cell carcinoma
mfot05230  Central carbon metabolism in cancer
mfot05231  Choline metabolism in cancer
mfot05235  PD-L1 expression and PD-1 checkpoint pathway in cancer
Brite
KEGG Orthology (KO) [BR:mfot00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04066 HIF-1 signaling pathway
    126508397
 09140 Cellular Processes
  09141 Transport and catabolism
   04140 Autophagy - animal
    126508397
   04137 Mitophagy - animal
    126508397
   04148 Efferocytosis
    126508397
 09150 Organismal Systems
  09151 Immune system
   04659 Th17 cell differentiation
    126508397
  09152 Endocrine system
   04919 Thyroid hormone signaling pathway
    126508397
 09160 Human Diseases
  09161 Cancer: overview
   05200 Pathways in cancer
    126508397
   05205 Proteoglycans in cancer
    126508397
   05208 Chemical carcinogenesis - reactive oxygen species
    126508397
   05230 Central carbon metabolism in cancer
    126508397
   05231 Choline metabolism in cancer
    126508397
   05235 PD-L1 expression and PD-1 checkpoint pathway in cancer
    126508397
  09162 Cancer: specific types
   05211 Renal cell carcinoma
    126508397
  09172 Infectious disease: viral
   05167 Kaposi sarcoma-associated herpesvirus infection
    126508397
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:mfot03000]
    126508397
Transcription factors [BR:mfot03000]
 Eukaryotic type
  Basic helix-loop-helix (bHLH)
   Factors with PAS domain
    126508397
SSDB
Motif
Pfam: bHLH_HIF1A PAS_3 PAS_11 HIF-1a_CTAD PAS HIF-1 PAS_9 PAS_4 DDRGK HLH
Other DBs
NCBI-GeneID: 126508397
NCBI-ProteinID: XP_050009565
LinkDB
Position
Unknown
AA seq 829 aa
MEGAGGENEKKNRMSSERRKEKSRDAARSRRSKESEVFYELAHQLPLPHNVSSHLDKASV
MRLTISYLRVRKLLDAGDLDIEDEMKAQMNCFYLKALDGFVMVLTDDGDMIYISDNVNKY
MGLTQFELTGHSVFDFTHPCDHEEMREMLTHRNGPVKKGKEQNTQRSFFLRMKCTLTSRG
RTMNIKSATWKVLHCTGHIHVYDTNSNQSQCGYKKPPMTCLVLICEPIPHPSNIEIPLDS
KTFLSRHSLDMKFSYCDERITELMGYEPEELLGRSIYEYYHALDSDHLTKTHHDMFTKGQ
VTTGQYRMLAKRGGYVWVETQATVIYNTKNSQPQCIVCVNYVVSGIIQHDLIFSLQQTEC
VLKPVESSDMKMTQLFTKVESEDTSCLFDKLKKEPDALTLLAPAAGDTIISLDFGSDDTE
TEDQQLEDVPLYNDVMFPSSNEKLTNINLALSPLPASETPKPLRSSADPALNQEVALKLE
PSPESLELSFTMPQIQDQPASPSDGSTRQSSPEPNSPSEYCFDVDSDMVNVFKLELVEKL
FAEDTEAKNPFSTQDTDLDLEMLAPYIPMDDDFQLRSFDQLSPLESSSSSPPSVSTVTGF
QQTPLQKPTITAAAATTATNTATTTDELKTVTKDNIEDIKILIASPSSVHVPQETTAATA
SAYSAPHSRTASPDRAGKRVREQTEKAHPRSPNMSVTLSQRNTVTEEDLNPKIIALQNAQ
RKRKMEHDGSLFQASGIGTLLQQPGDRAPTTSLSWKRVKGCKSSEQNGMEQKTIILIPSD
LACRLLGQSMDESGLPQLTSYDCEVNAPVQGSRNLLQGEELLRALDQVN
NT seq 2490 nt   +upstreamnt  +downstreamnt
atggaaggcgccggcggcgagaacgagaagaaaaataggatgagttctgaacgtcgaaaa
gaaaagtccagagatgcagcaagatctcggcgaagcaaagagtcggaagttttttatgag
cttgctcatcagctgccacttccccacaatgtgagctcccatcttgataaagcttctgtt
atgaggctcaccatcagttacttacgtgtgaggaagctactggatgctggcgatctagac
attgaagatgaaatgaaagcgcagatgaactgcttttatttgaaagccctggatggcttt
gttatggtgctaacagatgatggtgacatgatttacatctctgataacgtgaacaaatac
atggggttaactcagtttgaactaactggacacagtgtgtttgattttactcatccatgt
gaccatgaggaaatgagagaaatgcttacacacagaaatggcccagtgaaaaaaggtaaa
gaacaaaacacacagcgaagcttttttctcagaatgaaatgcaccctaactagccggggg
agaacaatgaacataaagtctgcaacgtggaaggtgcttcactgcacaggccatattcat
gtatatgacaccaacagtaaccaatctcagtgtgggtacaagaaaccgcccatgacatgc
ttggtgctgatttgtgaacccattcctcatccatcaaatattgagattcctttagatagc
aagacttttctcagtcgacacagcctggatatgaaattttcttactgtgatgaaagaatt
actgagctgatgggttatgagccagaagaacttttgggccgctcaatttatgaatattat
catgctttggactctgatcatctgacaaaaactcatcatgatatgtttacaaaaggacaa
gtcaccacaggacagtacaggatgcttgccaaaagaggtggctatgtctgggttgaaact
caagcgactgtcatatataatacgaagaactctcagccacagtgcattgtgtgtgtgaac
tacgttgtgagtggtattattcagcacgacttgattttctcccttcaacaaacagaatgt
gtcctcaaaccagttgaatcttcagatatgaaaatgactcagctgttcaccaaagttgaa
tcagaggatacaagctgcctttttgataagcttaagaaagaacctgatgctctaactctg
ctggccccagctgctggggacacgattatatctctggattttggcagtgatgacacagaa
actgaagaccaacaacttgaagatgtcccattatataatgatgtaatgttcccctcctct
aatgaaaaattaacaaatataaatctggcactgtctccattacctgcctctgaaactcca
aagccacttcgaagtagtgctgatcctgcactaaatcaagaggtggcattaaagttagag
ccaagtccggagtcactggaactctcctttacgatgccccagattcaagatcagccagcc
agtccttctgacggaagcactagacagagttcacctgagcctaacagtcccagtgaatat
tgttttgatgtggatagcgatatggtcaatgtcttcaagttggaactggtggaaaaactg
tttgccgaagacacagaagcaaagaacccattttcaactcaggacaccgatttagacttg
gagatgctggccccctacatcccgatggatgatgatttccagttgcggtcctttgaccag
ttgtcgccattagagagcagttcttcaagccctccaagtgtgagcacagtgacagggttc
cagcagaccccgctgcagaaacctaccatcactgccgctgccgccactaccgccaccaac
actgccaccaccactgatgaattaaaaacagtgacgaaggacaatatagaagacattaaa
atactgattgcatctccatcatctgtccatgtacctcaagaaacaacagctgctacagca
tcagcatacagtgctcctcacagtcggacagcctcacccgacagagcaggaaagagagtc
agagaacagacagagaaagctcatccaaggagccctaacatgtctgtcactttgagtcaa
agaaatactgttactgaggaagacttaaacccaaagataatagctttgcagaatgcccag
aggaagcggaaaatggaacatgatggctccctttttcaagcatcaggaattggaacatta
ttgcagcagccaggtgaccgtgctcctactacgtcactttcttggaaacgtgtgaaagga
tgtaaatctagtgaacagaatgggatggagcaaaagacaattattttaataccctctgac
ttagcatgtagactgctggggcaatcaatggatgagagtggattaccacaactgaccagt
tatgattgtgaagttaatgctcccgtacaaggcagcagaaacctactgcagggtgaagaa
ctactcagagctctagatcaagttaactga

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