Alexandromys fortis (reed vole): 126509364
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Entry
126509364 CDS
T08493
Name
(RefSeq) exosome complex component RRP4
KO
K03679
exosome complex component RRP4
Organism
mfot
Alexandromys fortis (reed vole)
Pathway
mfot03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mfot00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
126509364
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mfot03019
]
126509364
Messenger RNA biogenesis [BR:
mfot03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
126509364
Prokaryotic type
Archeal mRNA degradation factors
Exosome components
Core exosome
126509364
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRP4_S1
ECR1_N
RRP40_S1
ECR1_N_2
EXOSC1
Motif
Other DBs
NCBI-GeneID:
126509364
NCBI-ProteinID:
XP_050011173
LinkDB
All DBs
Position
Unknown
AA seq
289 aa
AA seq
DB search
MAMEMRLPKARKPLSESLGRDSKKHLVVPGDTITTDTGFMRGHGTYMGEEKLIASVAGSV
ERVNKLICVKALKTRYNGEVGDIVVGRITEVQQKRWKVETNSRLDSVLLLSSMNLPGGEL
RRRSAEDELAMRGFLQEGDLISAEVQAVFSDGAVSLHTRSLKYGKVSQAWEAFKSKSPYN
KRAVSFNEMAAVTMFLNMYLKEEEVLCVLTSTACYCKHFVPVALSDREVISRLRNCVVLL
VTQRMMLYDTSILYCYEASLAHQIKDILKPEVMEEIMLETRQRLLEQEG
NT seq
870 nt
NT seq
+upstream
nt +downstream
nt
atggcgatggaaatgaggcttccaaaggctcgcaaacctctcagtgagagcctgggccgc
gactctaagaaacatttggtggtaccgggggatacgatcaccacggacacaggattcatg
cggggccatggaacatacatgggggaagagaagctcattgcgtctgtggccggctccgtg
gagagggtgaacaagctgatctgtgtgaaagccttgaaaaccaggtacaatggagaagta
ggagacattgtagtggggagaatcacagaggttcaacagaagaggtggaaggtggaaaca
aattctaggctggattccgtcttgctcctctcgtccatgaacctgcctggaggggagctg
aggagaagatctgcagaggatgagctggccatgagaggcttcttacaggaaggagacctc
atcagtgcagaggtccaggcagtgttctcggatggagctgtttctctgcacacaaggagc
ctgaaatatggaaaggtaagtcaggcttgggaggctttcaagtctaaatccccatacaac
aaaagagctgtgtcctttaatgaaatggcagctgtcaccatgttcttgaacatgtacttg
aaggaggaagaggtgttgtgtgtgctgacctccacagcctgttactgtaaacacttcgtg
ccggtagcccttagcgatcgagaggtgatctcccggcttcggaactgcgtagtcttgctg
gtaactcagagaatgatgctgtatgacaccagcatcctgtactgctacgaggcctccctt
gcacatcagatcaaagatatcttaaagccagaagtaatggaggagatcatgctagagacg
cgccagaggcttttggaacaggagggataa
DBGET
integrated database retrieval system
