Alexandromys fortis (reed vole): 126509606
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Entry
126509606 CDS
T08493
Name
(RefSeq) LOW QUALITY PROTEIN: THO complex subunit 2-like
KO
K12879
THO complex subunit 2
Organism
mfot
Alexandromys fortis (reed vole)
Pathway
mfot03013
Nucleocytoplasmic transport
mfot03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
mfot00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
126509606
09122 Translation
03013 Nucleocytoplasmic transport
126509606
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mfot03019
]
126509606
03041 Spliceosome [BR:
mfot03041
]
126509606
Messenger RNA biogenesis [BR:
mfot03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
126509606
Spliceosome [BR:
mfot03041
]
Complex C
Other components
EJC/TREX
126509606
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
126509606
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Tho2
THOC2_N
Thoc2
Motif
Other DBs
NCBI-GeneID:
126509606
NCBI-ProteinID:
XP_050011540
LinkDB
All DBs
Position
Unknown
AA seq
1588 aa
AA seq
DB search
MAMTAATLVVPTEWIKNWEKSGRSEFLRLCRILSESKSRDTLACRDFQQALYELSYHVIK
GTLKPEQASSVLSDISEFREDIPFILADIFCILDIETNCLEEKNKRDHFTQLVLACLYLV
SDTVLKERLDPETLESLGLIKQSQQFTQKSVKIKTKLFYKQQKFNLLREENEGYAKLIVE
LGQDLSGNITSDLILEILKSLIGCFNLDPNRVLDIILEVFECRPEHHDFFISLLEAYMNM
CEPQTLCHILGFKFKFYQEPNGETPSSLYTVAAVLLQFNLIDLDDLYVHLLPADSCIVNE
YKREIVEAKHIVRKLTMVVLPSDKSDEREKEKKKDDKVEKAPDNQKLGLLEALLVIGDWQ
HAQSIMDRMPPYYAASHKVIALAICNLIHITIEPLYRRVGVPKGAKGSPVNALQNKKSPK
PAESFEDLRRDVFSMLCYLGPHLSHDPILFAKVVRIGKSFMKEFQSDGKQENKEKMEVIF
SCLLSITDQVLLPSLSLMDCNACMSEELWGMFKTFPYQHRYRLYGQWKNETYHSHPLLVK
IKAQTVDRAKYIMKRLTKENVKPSGRQIGKLSHSNPTILFDYVLSQIQKYDNLITPVVDS
LKYLTALNYDVLAYCIIEALANPEKERMKHDDTTISSWLQSLASFCGAVFRKYPIDLAGL
LQYVANQLKAGKSFDLLILKEVVQKMAGIEVTEEMTMDQLEAMTGGEQLKAEGGYFGQIR
NTKKSSQRLKDALLDHDLALPLCLLMAQQRNGVIFQEGGEKHLKLVGKLYDQCHDTLVQF
GGFLASNLSTDDYIKRVPSIDVLCNEFHTPHDAAFFLSRPMYAHHISSKYDELKKSEKGS
KQQHKVHKYITSCEMVMAPVHEAVISLHISKVWEDISPQFYTTFWSLTMYDLAVPHTSYE
REVNKLKIQMKAIDDNQEMPLNKKKKEKERCTALQDKLLEEEKKQTEHVQRVLQRLRLEK
DNWLLAKSTKNETITKFLQLCIFPRCIFSAIDSVYCAHFVELVHQQKTPNFSTLLCYDRV
FSDIIYMVASFTENEASRYGRFLCCMLETVTRWHSDRSTYEKECGNYPGFLTILRATGFD
GGNKADQLDYENFRHVVHKWHYKLTKASVHCLETGEYTHIRNILIVLTKILPWYPKVLNL
GQALERRVHKICQEEKEKKPDLYVLAMVXSGQLKNRKSYMIPENEFHHKDPPPRNATSSV
PNGPCSGLPSSIGNTSKSDESSTEETDKSRERSQCGLKAVTKTSSAVPKGNSNNGNSSSN
TKAVKENDKEKGKEKEKEKKEKTSAVIPEVRVLCKDNKEKPKEEQPNKDEKIRETKERMP
KSDKDKEKLKKEEKAKDEKFRITVPNIDSKSTQEREKEKEPSRERDLAKEMKSKENVKGG
EKTPVSGSLKSPVSRTDNAEPEREKRRKVDSHPSPSHSSTVKESLNKLKESSAKLYINHA
PPLLCKSKEREMDKKDLDKSRERSREREKKEEKDRKERKRDYSNNDREVPLDLVKRRKDE
NGILGTSKHKSESPCESLYPSEKDKEKNKSKSSGKEKGDFFKPEKVDKVSSGKKESGHDK
EKVEKKEKWDSCGDKDEKKHHKSSDKHR
NT seq
4767 nt
NT seq
+upstream
nt +downstream
nt
atggcgatgactgcagcaactttagtggttcccactgagtggatcaagaactgggagaaa
tctgggagaagcgaatttttgcgtttatgccggattctcagtgaaagtaaaagccgcgac
actttggcttgtagagatttccaacaagctctctatgagttgtcataccatgtcattaaa
ggaactttaaagccagaacaggcatccagtgttctcagtgacatcagtgaatttcgtgaa
gatattccatttattcttgccgacatattctgcatattagatattgagacaaattgttta
gaagaaaagaacaagagagatcattttacacagttggtattagcatgtttatatttagtt
tcagacacagttctaaaggaacgcttagatccagaaacattggagtcattaggccttatc
aaacaatcacagcagttcactcagaagtcagttaaaatcaagacaaaactcttttacaaa
caacagaagttcaatttgttaagagaagaaaatgaaggttatgccaagcttattgttgaa
ttggggcaagatttatctggaaatattactagtgatttaatcttagaaattctcaaatct
ttaataggttgctttaatctagaccccaatcgagttttggatatcatattagaggtgttc
gagtgtaggccagaacatcatgatttctttatatctttattagaagcttacatgaatatg
tgtgaaccacaaacattgtgtcatattcttggattcaaattcaagttttaccaggaacca
aatggtgagactccatcatctttgtatacagtcgcagcagtacttctacagtttaatctt
atcgatttggatgatctttatgtacaccttcttccagctgatagttgcattgtgaatgaa
tacaaacgagaaattgtggaagctaagcacattgtcagaaaacttacaatggttgtattg
ccttctgacaaaagtgatgaacgagagaaagaaaagaaaaaagatgataaagtagagaag
gcacctgacaatcaaaaacttggtttgttggaagccttattagttattggtgattggcag
catgcacagagtattatggatcgaatgcctccgtactatgcagcatcacataaagtaata
gcccttgctatctgcaatcttatacacataactattgagcctctttaccgaagagttggt
gttcctaaaggtgctaaaggctcacctgtcaatgctttgcaaaacaagaaatcaccaaag
ccagcagagagctttgaagacttaaggagagatgtattcagtatgctctgttatcttggt
ccccacctttctcatgatcccatcttatttgcaaaggttgtgcgcataggcaagtcattt
atgaaggaatttcagtctgatgggaagcaagaaaataaagagaaaatggaagtcatcttt
agttgtttgcttagcatcaccgaccaggtactacttccgtctctttctttgatggattgc
aatgcgtgtatgtcagaggaattgtggggaatgtttaaaacatttccttatcagcataga
taccgcttatatggccaatggaagaatgagacttaccatagtcacccacttttagtaaaa
attaaagctcaaacagtagacagagccaagtatattatgaagcgtctaaccaaggaaaat
gtgaaaccttcaggaagacagattggtaaactgagccacagcaatccaaccattttgttt
gattatgtcttgtcacaaatacagaaatacgataacttaataacacctgtggtagactca
ttgaaatatctcactgcgttgaattatgatgttttggcctattgtatcattgaagcatta
gctaatccagaaaaagaaagaatgaagcacgatgacacaaccatctcaagctggcttcag
agcctggctagtttctgtggtgcagtttttcgtaaatacccaattgatcttgctggtctt
cttcagtatgtagccaatcaattaaaggcaggcaaaagttttgacctgcttatattgaaa
gaagtggtacaaaaaatggcaggaatagaagttacagaggaaatgacaatggaccagcta
gaggctatgactggtggggagcaactgaaagccgagggtggatattttggccagataaga
aacactaaaaaatcctctcagagattgaaggatgcactgctggaccatgaccttgccctt
cctctctgtttgcttatggcccagcagaggaatggtgtgatctttcaggaaggcggagag
aaacatttgaagcttgtagggaagctgtatgaccagtgtcatgatactttggtacagttt
ggtgggtttttagcttcaaatttaagcacagatgattacataaagagagtaccttcaatt
gatgtactgtgtaatgaatttcatacgcctcatgatgcagcattttttctgtctcggccg
atgtatgcgcaccatatttcatcaaagtatgatgaacttaagaaatcagagaagggtagt
aaacagcaacataaagttcataaatacattacatcatgtgagatggtgatggctcctgtc
catgaagcagtgatctccttacacatttccaaagtctgggaagatatcagccctcaattt
tataccacgttctggtctctgacaatgtatgaccttgcagttccacacactagttatgaa
cgagaagtcaataaacttaagatccagatgaaagcaattgatgacaatcaagaaatgcct
ctgaataaaaagaaaaaagagaaagagcgctgtactgcccttcaggacaagcttcttgaa
gaagaaaagaaacagacggagcatgtgcaacgagttctacagagactgagattggaaaag
gacaactggctcttagcaaaatctactaaaaatgagaccatcacaaagtttctccagctg
tgtatatttcctcgttgtattttttcagcaattgattctgtttactgtgcacattttgtt
gagttagtccaccaacagaagactccaaatttctccacacttctctgctatgatcgagtt
ttctctgatataatttatatggttgctagctttactgaaaatgaagctagtcgatatggt
agatttctttgctgcatgttagagacggtgactaggtggcatagtgacagatccacctat
gagaaggaatgtggaaactatccaggattccttactatattacgagcaactggatttgat
ggtggaaataaagcggatcagttagattatgaaaattttcgacatgttgtccataagtgg
cattataaactaaccaaggcatcagtacattgccttgaaacaggtgaatatactcatatc
agaaatatcttgattgtgctcacaaaaatactgccatggtaccccaaagttttaaatctg
ggacaggctttggaaagaagagtacataaaatctgccaagaagagaaagaaaagaagcca
gatctgtatgtactagcaatggtctaatctgggcagctgaaaaatagaaagtcgtacatg
atacctgaaaatgaatttcatcacaaagatcctcctccaagaaatgctacttcaagtgta
ccaaatggaccttgtagcgggctgccatcttccataggaaacacgtctaagtcagatgaa
agcagtactgaggagactgacaagtcaagggaaaggtctcagtgtggcctgaaagctgtc
actaaaacctccagtgccgtaccaaaagggaattcaaacaatggaaacagcagctccaac
accaaggctgttaaggaaaatgacaaagaaaaggggaaagagaaggaaaaagaaaaaaaa
gaaaagacctcagctgttattccagaagttagggtactttgtaaagacaataaagaaaag
cccaaggaagagcagccaaataaagatgagaaaataagagagaccaaggaaagaatgcct
aaatctgacaaagataaggaaaaattaaagaaggaggaaaaagctaaagatgagaagttc
aggatcactgtccctaatatagattcaaagtctactcaagaaagagaaaaagagaaagag
ccatcaagagaaagagatttagcaaaggaaatgaaatcaaaagaaaatgttaaaggagga
gaaaaaacaccagtttctgggtccttgaaatcacctgtttcccgaacagataatgcagag
cccgaaagagagaagcgtcgcaaggtagattcccatccttctccatcccattcttccaca
gtaaaggaaagtctcaacaaactcaaggagtcgtcagcaaagctctacatcaaccatgct
ccaccactgctgtgcaagagtaaggagagagaaatggacaagaaagatttggacaagtcg
agggaaagatccagagagagagagaaaaaagaagagaaggaccggaaagagcggaaaagg
gattattcaaacaatgaccgggaagtgcctctggacttagtcaaaaggcggaaagatgaa
aatggaatattggggacttcaaagcacaaaagtgaaagcccctgtgagtctctttatcca
agtgagaaagacaaggaaaaaaataagtcaaaatcctcaggcaaagaaaaaggtgatttc
tttaaacctgaaaaggtggataaagtatccagtgggaaaaaggagtctggacatgataaa
gaaaaggtagaaaagaaagagaaatgggacagttgtggagataaggacgagaagaagcat
cacaagtcctcagacaagcacagataa
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integrated database retrieval system
