Alexandromys fortis (reed vole): 126509733
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Entry
126509733 CDS
T08493
Name
(RefSeq) probable ATP-dependent DNA helicase HFM1 isoform X1
KO
K15271
ATP-dependent DNA helicase HFM1/MER3 [EC:
5.6.2.4
]
Organism
mfot
Alexandromys fortis (reed vole)
Brite
KEGG Orthology (KO) [BR:
mfot00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
mfot03036
]
126509733
Enzymes [BR:
mfot01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
126509733
Chromosome and associated proteins [BR:
mfot03036
]
Eukaryotic type
Meiosis-specific proteins
Others
126509733
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sec63
DEAD
SNRNP200_wHTH
ResIII
Helicase_C
AAA_22
DEXQc_Suv3
Hfq
Motif
Other DBs
NCBI-GeneID:
126509733
NCBI-ProteinID:
XP_050011765
LinkDB
All DBs
Position
Unknown
AA seq
1475 aa
AA seq
DB search
MPKSNDCFFPLDNLFFSSPGEAGNFPVKGKSPDWFLPPAPLISEIPDIQELEEEIESHKL
LGQEKIPKVLTSNLKIINEDKNCISPTQKFHFPYNMDTQDYLHVGGSSNNDSSRIAGKLV
YSSSQRYKDHVGAKNGSGDSKSPNVAEDRGEGTAAFKKSPVKLTQTKINKEKSWHGSNNK
EKLQYSTNKGKAKDGFPASETGENIFEVPAFSVTSQPRDVQGITPSGLGSLKAVTEIPAK
FRSIFKEFPYFNYIQSKAFDDLLYTDRNFVICAPTGSGKTVVFELAITRLLMEVPLPWSN
MKIVYMAPIKALCSQRFDDWKEKFGSLGLNCKELTGDTVMDDLFEIQHTHIIMTTPEKWD
SMTRKWRDNSLVQLVRLFLIDEVHIIKDENRGPILEVVVSRMKTVQSLSRTLQNASPVPM
RFVAVSATIPNAEDIAEWLSDGKRPAVCLRMDESHRPVKLQKVVLGFPCGSSQTEFKFDL
ALNYKVYSVIRTYSDQKPTLVFCATRKGVQQAASVLVKDAKFIISMGQKLRLQKSAYSIR
DSKLKDVVVYGVGYHHAGLELSDRKLVEELFTSGDLPVLFTTSTLAMGVNLPAHLVVIKS
TMHYIGGVFEEYSETDILQMIGRAGRPQFDTTATAVIMTRLSTREKYVQMLACNDTVESS
LHRHLIEHLNAEIVLHTITDVSIALDWIRSTLLYIRALKNPSHYGFVSGLSKDGIEAKLQ
ELCLKNLKDLSSLDLIKMDEDAYFKPTEAGRLMAWYYITFETVKKFCTISGKETLSDLIS
MIASCNEFLDVQLRTSEKRALNTLNKDPNRITIRFPMEGRIKTREMKVNCLIQAQLGCIP
IQDFTLTQDTSKIFRSGSRIVRWLSDFVASQEKKFAVLLNSVILAKCFKCKLWENSRHVS
KQLDKIGISLSNTMVNAGLTSFKKIEEANAREIELILSRLPPFGTLIKEAVMYLPKYELE
VEQISRYSDTKAEILVTVVLRNFEQLQTKRTAPDSHYTTLIIGDADNQVVFKHKIMDSVL
LKNGNWAKKIDVKRALISEDLSINLISSDYVGLDIQQKFTVFYLGPRRCVNQTVMQGRLE
TDISHPKHSNRAAAAVYNEGMATCKKPGNRECNHHCKNKHTCAHDCCKIGVPQKAEVKES
AMSSYLSDLKSRDAVSSLPPVKRLKIQMNKSQNVDLKEFDFTPRPSLSSISRSGSLNIPE
LPMSKPWSEREIYGEVPQEPSEYHGKDFLRWNSCITSNERTPQTVMFSRHANTSGNHSVV
GESRCSEGLDVNFELGNEVWDDFDDETLVEVMSVLAGAEKTAASGSGDTCDSSPWGSKLP
SQKSSSKFQRKISNSYASSHEKPDIYLSDCAVSKSGPSPVSELPLQTGSANLVNFQERRQ
PTLSPVIERVSFTRSDKTPQPLNLQGVDIFIGNGDSRKEADLSKYYPDDAAEEMKALLGI
FRDILKKKKKKKKERKKRRKEKEVIILLISQVKHV
NT seq
4428 nt
NT seq
+upstream
nt +downstream
nt
atgccgaaatcaaacgattgctttttccccctggataatttgtttttcagcagcccaggt
gaagctggaaacttcccagttaaggggaaatcaccggattggtttctccctccagctcca
ctgatttcagaaattccagatattcaagagttagaggaagaaattgaaagtcataaactg
ttaggccaagaaaagataccaaaagtgttaacatcaaatttgaagatcattaatgaagac
aaaaattgtatttcaccaacacaaaaattccattttccctataatatggatacacaggat
tacctacatgtaggaggctcaagtaacaatgactcatcccgtattgctggcaagctggtg
tatagctcgtctcagagatataaagaccacgtgggcgctaagaatggttctggtgattca
aaatcacctaatgtcgcagaggatagaggagaggggacagcagcattcaagaaaagccca
gtgaaacttacccaaacaaagataaacaaggagaaatcatggcacggtagcaacaataaa
gagaaacttcagtattccacaaataaagggaaagcaaaagacgggtttcctgcttctgaa
actggagaaaacatattcgaagtgccggccttctccgtcacatcccagcctcgcgacgtt
caaggtataactccaagtggcttaggttccttgaaggctgtcacagaaattccggcaaaa
tttaggagtatattcaaagaattcccttacttcaactatatacaatccaaagcctttgat
gatcttctttacacagataggaattttgtgatttgtgcccccactggttctgggaaaact
gtagtgtttgaacttgcaataactagattgttaatggaagttccattgccatggtccaac
atgaagattgtttacatggcaccaataaaagccctttgtagtcagcggtttgatgactgg
aaagaaaaatttggatcattgggcttgaattgtaaagaacttactggagatacagtaatg
gatgacctatttgagattcaacatacccatataattatgacgactccagagaagtgggac
agcatgaccaggaagtggagagacaactctttagtccagctggttcgactatttctcatt
gatgaggtgcatattataaaagacgaaaaccgtggtccaattcttgaggttgttgttagc
agaatgaaaactgtccagtctttatctaggactttgcagaatgccagccctgtccctatg
agatttgtagctgtgtctgcaaccattcccaatgctgaggacatcgcagagtggctttcg
gatggcaagagacccgccgtgtgtctgagaatggatgagagccacagacctgtgaaactt
cagaaagtggtgctgggctttccctgcggcagtagccaaacggaatttaagtttgactta
gccctcaactataaagtgtacagtgtgatacggacttactccgatcagaagcccacactt
gtgttttgtgcaacaaggaaaggtgtgcagcaggctgcgtctgttcttgtgaaagacgct
aaatttattatctccatgggacagaaactcaggttacagaagtctgcatattctataagg
gattcaaaactgaaagatgtcgtggtgtatggtgtcggttaccaccatgctgggttggag
ctgtccgataggaagctggttgaagaactgtttacttctggagatctcccagttcttttt
accacgagcactcttgccatgggagtgaacttgccggctcacctggtagttataaagtct
accatgcactacattggaggcgtgtttgaggagtacagcgagacagacatcctgcagatg
atcgggcgagccggcagacctcagtttgacacgacagctaccgcagttatcatgacccgg
ttaagcacaagagagaagtacgttcagatgttagcatgtaacgacaccgtagagagcagc
ttgcacagacatctgatcgagcatttaaacgcagagatagtgctgcataccatcacagac
gtgagcattgctctggactggatccggtcaaccctcctgtacatcagagctctgaagaac
ccgtctcactacggttttgtatctggattgagcaaagatggaatcgaagcgaaattacaa
gaattgtgtttgaagaatctgaaagatttatcatcactggacttaataaagatggatgaa
gatgcttatttcaaaccaacagaggcaggaagactaatggcttggtactatattacattc
gagacagtgaagaagttttgtacaatcagtggaaaggaaactttatcagatttaatttcg
atgatagccagctgcaatgagttcctggacgtgcagctgaggacaagcgagaagagagca
ctgaacactttaaacaaagacccgaaccggatcaccatcagatttccaatggaagggaga
attaaaacaagagagatgaaagtaaattgtctcatacaggctcagctgggatgcattcct
atacaagattttactttgacacaagatacctcgaagattttcagaagtggctcacgaatt
gtaagatggttgtcagattttgtggcttcccaggaaaagaagtttgctgtgcttttaaac
agtgtgattttagctaaatgctttaagtgtaagctttgggaaaactctcgacatgtatct
aaacagctggataaaatcggcatatcattatcaaataccatggtaaatgcaggtttgact
tcctttaaaaaaatagaagaagctaatgcaagagaaattgaactgattttaagtagactt
ccgccttttggaaccctgataaaagaagctgtgatgtatctaccaaagtatgagcttgaa
gtggagcagatttctagatacagcgacaccaaggccgagatattggtgactgttgtctta
agaaactttgagcagctacagaccaaaagaacagcaccagactctcactacactacctta
atcataggcgatgcagataatcaagtcgtttttaagcacaaaattatggattctgttttg
ttaaaaaatggaaattgggctaaaaaaattgatgtgaagagagctcttatatctgaagat
cttagcattaatctaattagttctgattatgttggtcttgatattcaacagaaatttaca
gtcttttatttaggccccaggaggtgtgtaaatcaaacagttatgcaaggaaggttagaa
acagacatttctcatcccaagcactcaaacagagctgctgcagccgtgtacaatgaagga
atggctacctgcaaaaaacctgggaaccgagaatgcaatcatcattgtaaaaataaacat
acatgtgcacatgactgctgtaaaatcggagttccacaaaaggcagaagttaaagagtca
gcaatgtcttcgtatttgtctgacttaaaaagcagagatgctgtctcttctcttcctcca
gtgaaacgactcaagatacagatgaacaaatctcaaaatgtggaccttaaggagtttgat
tttactccaagaccttccctttccagtatatcaaggtctggatctttaaacatcccagag
ttgccaatgtcgaaaccgtggagcgagcgtgaaatctatggagaagttccacaggaacca
tctgaatatcatggcaaagattttctcaggtggaactcttgtataacttcaaatgaaagg
actccccaaacagtgatgttcagcagacacgctaacacatctggaaaccacagtgttgtg
ggcgaaagcaggtgttctgaaggtttggatgtgaactttgagttgggaaatgaagtttgg
gatgactttgatgacgaaaccttagtagaagttatgagcgttttggccggtgccgagaag
acagctgcatcaggatctggagacacttgtgattcgagtccctggggaagtaagctaccc
tcccaaaagtcaagcagcaaattccaacgaaaaatctcaaacagttatgcttcatcacat
gaaaagccagatatttatctatcagattgtgccgtgtccaagtctggtccatctcccgtc
tcagaattacctctacaaactggaagtgcaaaccttgtcaattttcaagagagaaggcag
ccaactctctcaccagtgattgagagggtaagttttacccgctctgacaaaacaccacag
cctctcaaccttcagggagtggatattttcattggaaacggtgactctagaaaggaagct
gatctcagtaagtattatcctgacgatgcagctgaagaaatgaaggctcttctgggaata
tttagggatattttaaaaaaaaaaaaaaaaaaaaaaaaagaaagaaagaaaagaagaaaa
gaaaaagaagtaattattttgttaataagccaagtaaaacatgtctaa
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