Alexandromys fortis (reed vole): 126510306
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Entry
126510306 CDS
T08493
Name
(RefSeq) ATP-dependent RNA helicase DHX58
KO
K12649
ATP-dependent RNA helicase DHX58 [EC:
5.6.2.6
]
Organism
mfot
Alexandromys fortis (reed vole)
Pathway
mfot04622
RIG-I-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
mfot00001
]
09150 Organismal Systems
09151 Immune system
04622 RIG-I-like receptor signaling pathway
126510306
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
mfot04054
]
126510306
Enzymes [BR:
mfot01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
126510306
Pattern recognition receptors [BR:
mfot04054
]
Cytoplasmic pattern recognition receptors
RIG-I-like receptors
126510306
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RIG-I_C-RD
RIG-I_C
ResIII
DEAD
Helicase_C
SWI2_SNF2
AAA_19
Terminase_6N
Cas3-like_C_2
Motif
Other DBs
NCBI-GeneID:
126510306
NCBI-ProteinID:
XP_050012787
LinkDB
All DBs
Position
Unknown
AA seq
678 aa
AA seq
DB search
MELRPYQWEVISPALEGRNIIIWLPTGAGKTRAAAFVARRHLETVDGGKVVVLVNRVHLV
SQHAEEFRNMLDKRWTMATLSGDMGPRAGFGLMARSHDLLICTAELLQLALVSPEDEEHV
ELTEFSLIVVDECHHTHKNTVYNLILSRYLEHKLQKAKCLPQVLGLTASPGTGGATKLQG
AIDHILQLCANLDTWRIMSPENCRPQLLEHNPKPCKQYNLCQRRREDPFGDLLKELMKQI
HQQLAMPELSQQFGTQTYEQQVVELSKAAAEAGLQQRRVYALHLRRYNDALLTHDTVRAR
DALDLLQDFYHRERATKTQMLRAERWLLELFDGHKNELAQLATCGPENPKLEMLEGILLK
QFGSPNHPRGIIFTRTRQSAYSLLLWLWQQPGLQKVNIKAQMLIGAGNTSQSTHMTQKGQ
QEVIQEFRDGTLNLLVATSVAEEGLDIAQCNVVVRYGLQTNEISMVQARGRARAGQSVYS
FVATEGSRELQRELTNEALEVLMEQAVAAVQKMDPQEFKAKIQDLQRAALAKRAVRAAQR
ESQQRQFPAEHVQLLCINCMVAVGYGSDLRKVEGTHHVNVNPSFSVYYTVSQKPVVINKV
FKDWRPGGTISCSNCGEVWGLQMIYKSVTLPVLKIRGILLETPHGRIQAKKWSRVPFSIP
DFDILQYCAQNLSDLSLD
NT seq
2037 nt
NT seq
+upstream
nt +downstream
nt
atggagctgcggccctaccagtgggaagtgatctcgcctgctctggaaggcaggaatatc
ataatctggttgcccacgggcgctggcaagacccgggcagctgcttttgtggccaggcgg
catctagagacagtagacggaggcaaggtggtggtgctggtcaacagggtacacctggtg
agccagcacgctgaggaattcaggaacatgttggataaacgctggaccatggctaccctg
agtggggacatgggaccacgagctggctttggcctaatggcccggagccatgacctgctg
atctgcacagcagagctcctgcagctggcgctggtcagcccagaagacgaggaacacgta
gagctcacagagttctcactgattgtggtggacgagtgccaccacacccacaagaacacg
gtctacaacctcattctgagccgctacttggaacacaagctgcagaaagcaaagtgcctt
ccccaggtgctggggctcacggcctccccaggcaccggcggggccaccaagctccaaggg
gccattgaccacatcctacagctctgtgccaacctggatacatggcgcatcatgtcacca
gagaattgccgcccccagctgctggagcacaacccgaagccctgcaagcagtacaacctc
tgccaaaggcgcagagaggacccttttggagacttgctaaaagagcttatgaaacaaatt
caccagcaactagcgatgcctgaactgagccagcagtttggaacacagacttacgagcag
caagtagtggagctgagcaaggctgccgctgaggcaggactccagcaacggcgggtgtat
gcgctccacttgcggcgctacaatgacgcgctgttgacccatgacaccgtccgcgcacgg
gatgctcttgacttgttgcaagatttctaccacagggagcgcgccacgaaaacccagatg
ctgcgtgcggagcgctggctgctggagctgttcgatggccataagaacgagctggcccag
ttagcaacttgtgggcctgagaatccgaagttggagatgctggaagggatcctgctgaag
caatttgggagccccaaccaccctcggggcatcatcttcacccgaacccgccagagtgct
tactccctcctgctctggctttggcagcagcctggcctacagaaagtgaacatcaaggcc
cagatgctgattggagcagggaataccagccagagcacacacatgacccagaaaggccag
caagaggtgatccaggagttcagggatggtaccctgaaccttctagttgccacaagtgtg
gcagaggaggggctggatattgcccagtgcaatgtggtggtacgctatgggctccagacc
aatgagatctccatggtccaggccaggggccgagctcgagctgggcagagcgtgtactcc
tttgtggcaacagagggcagtcgggagctgcagcgggagctgaccaatgaggctctggag
gtgctgatggagcaggccgtggctgcagtgcagaagatggacccccaagagttcaaggcc
aagatccaggacctgcaacgggcagctctggctaagcgagcagtgcgcgcagcccagcgg
gagagtcagcagaggcagttcccagcggagcacgtgcagctcctctgcatcaactgcatg
gtggccgtgggctacggaagtgacctgcggaaggtggagggcacccaccacgtcaatgtg
aaccccagcttctcggtctactataccgtctcccagaagcctgtggtcattaacaaagtc
ttcaaggactggaggcctggagggaccattagctgcagtaactgtggggaggtctggggc
ttgcagatgatctacaaatcagtgaccttgccggtgctcaaaatccgaggcatactcctg
gagacccctcacgggaggatccaggccaagaagtggtcccgggtgcccttctcaatacct
gattttgacattctacagtactgcgcccagaacctgtctgatctctccctggactga
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