Alexandromys fortis (reed vole): 126510537
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Entry
126510537 CDS
T08493
Name
(RefSeq) intermembrane lipid transfer protein VPS13A isoform X1
KO
K19525
vacuolar protein sorting-associated protein 13A/C
Organism
mfot
Alexandromys fortis (reed vole)
Brite
KEGG Orthology (KO) [BR:
mfot00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
mfot04131
]
126510537
Membrane trafficking [BR:
mfot04131
]
Endosome - Golgi transport
Rab GTPases and associated proteins
Rab associated proteins
126510537
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
VPS13_N
VPS13_M
VPS13_VAB
VPS13_C
RRM_fung
Motif
Other DBs
NCBI-GeneID:
126510537
NCBI-ProteinID:
XP_050013126
LinkDB
All DBs
Position
Unknown
AA seq
3168 aa
AA seq
DB search
MVFESLVVDVLNRFLGDYVVNLDKSQLSLGIWKGAVVLKSLEIKENALSELDVPFKVKVG
HIGSLTLKIPWKNLYTQPVEAVLEEIYLLIVPSSRIKYDPIKEEKQLMEAKQQELKRIEE
AKQKVVDQENPPEEKQDTFSEKLITQIIKNLQVKISNIHVRYEDDITNQDKPLSFGISLQ
NLSMQTTDQNWIPCLHDETEKLVRKLIRLDNLFAYWNVKSQMYYLNDYDESLVLLKNGIV
NENIVPDGYDFVFRPISANAKLQMNRRSDFDFSDPKINLDVELHTIVIEFNKPQYFSLME
LLESIDMMTQNLPYRKFKPSVPLHYHAKEWWAYAIHGILEVNVCPRLRMWSWKHIRDHRQ
KVKQYRESYKKKLTSKKPSPEILMSLEELEKTLDVFNITIARQQAEVEVKKAGYKIYKEG
VKDPEDNAGWFSWLWTWSESNAKQQLEVKPGILEEMLTPEEKVLLYEAIGYSETAVDPTL
PKTFEALKFFVHLKSMSVILRENHQKPELVNIIVEGLSTLIVQRPGAQAIKFETKIDSFY
ITGLPDNSRKPHLLSSLDDMSLFQITFETNPLDETVAQRCIIEAEPLEIIYDARTVNSIV
EFFRPPKDVHLAQLTSATLTKLEEFRDKTATGLLYIIETQKVLDLRINVKASYVIVPQYG
IFSPNSNLLLLDLGHLKVTSKSRSGLPEMKPSNTSLEEIMHRAYDSFDIQLTSIQLLYSR
VGDNWKEARKLNVSTQHILTPMHVNVELSKAMVFMDIKMPKFKISGKLPLISLRISDKKL
QGIMELLDSIPKPEPITDLSAPAKSFQIQASTLPASQISQKLIPLLEQPSVAEDDSEEEF
FDAPCSPLEEYPQILSRVRSPRPKKLQKKDCSVNLIQLRMRFEVAEVLIQFYHLVGDCEL
PVLETGVLGLGTEVEIRTFDLKANAFLKEFWLKCPEYLDENKKPIYLITTLDNTMEDLLT
LEFVRVEKHAPSLKSTYNNVLQLIKVNFSSLDIHLHTEALLNTMNYLNNTLPQLGEQSAS
VSVAETEDKGDLIKMLALKLPTNEDTITLQLLAELSCLRIFIQDQKQKISEIKIEGLDSE
MIMKPLVTEINAKLRNIIVLDSDKMAVYKKAVYITGKEVFSFKMISYMNATAGSAYTDMN
VVDVQVNLTVGCIEVVFVTKFLYSILAFIDNFQAVKNALAEATAQAAGMAADGVMELAQR
SSRLALDVNIKAPIVVIPQSPVSHNVFVADFGLITMKNTFVTVTETQSNLPPVIDLITIQ
LSEMRLYRSQFMTTAYQEVLDLLLPLNLEVIVERNLSWEWYKEVPCLNIKAQLKPMEFIL
SQEDLTTIFQTLYGNIWYGRDVSVPSSISKDNEIMTSGANHVSNHSGGSMVTAAVVEVHP
QASQVNTTLNVSFRTDYLTMALYSPGPEQAFFTDVRDPSLKLAEFKLENIISSLKLYTDG
STFCSFSLKNCILDDKRPHVIKATPRMIGLTLGFDKKDMVDVKYRRIRDAFVTDAVVQEM
YVCASVEFLMTVAHVFFDAYMTSTALETSVQAWTTKEEPAQDLGKWEINILIKNPEIVFV
ADMTRNDAPALVITTQCEICCKGDPESNTVTAAIKDLQVRACPFLPAKRKGKITTVLQPC
DLFYQATQIGTDPQIIDISVKSLTLKVSPVIINTIITITSALYTTKEPIPEENTSSIAHL
WDKQDTKNLKMWFLEESNETEKVVPSNELIPGGETLNLNIDSIFIVLEAGIGHRTVPMLL
AKSRFLGESKNWSTLINLHCQLELEVHYYNEMFGVWEPLLEPLEIDQTDDFRPWNLGIKM
KKKAKESIVESDSEEENYKVPEYKTVISFYSKDQLNITLSKCGLVMLNNLVEAFTEAATG
SSAVFLRDLAPFMILNSLGLTVSVSPSDSFNVLNVPMAKSYELKNEESLSMDYVRTKDSD
HFSAMTSLSSKLFFIILTPVNHSAADKIPLTKVGRRLYTVRHRESGVERSIVCQIDTVEG
SKKVTIRSPVQIKNHFSIPISVFEGDTLLGIASPENEFNIPLASYRSSLSLKPDDKDYQM
CEGIDFEEIIKYDGQLLRKKCKSIHASKRSFVINIVPEKDNLTSLSVYSEDGWDLPYVMH
LWPPILIRNLLPYKIAYYLEGIENTVFTLSEGHSSQIYNVEMDKAKLHLKLLDYLNHDWK
SEFHIKPNQQDINFINFTCLTEMEKTDLDIAIHMTYNTGQTIVAFHSPYWMVNKTNRMLQ
YKADGIHRKHPPNYKKPVLFSFQPNHFFNNNKVQLMVTDSELSDQFSIDTVGSHGAIKCK
GLKMEYQVGVTINLSSFNITRIVVFTPFYMIKNKSKYHISVAEEGSDKWLSLDLDQCIPF
WPEDASNILLIQVERSDGPPKRIHFNKQDSCILLRLNNELGGIIAEVNLAEHSTVITFSD
YHDGAATFLLINHTKNDLVQYKQSSLSEIEDSLPPGKAVYYTWADPVGSRKLKWSCGQSH
GEVTHKDDMMTPISVGKKTIYLVSFFEGLQRIILFTEDPKVFKVTYESEKAELAEQEIVL
ALQDVGISLVNNYTKQEVAYIGITSSDVVWETKPKKKARWRPMSIKHTEKLEKEFKEYTE
SSPLEDKVIELDNNIPVRLTPSGNDMKILQPHVIAVRRNYLPALKVEYNTSAHQSSFRIQ
IYRIQIQNQIHGAIFPFVFYPIKPPKSVTMDSAPKPFTDVSIVMRSAGHSQISRIKYFKV
LIQEMDLRLDLGFVYAIADLVTKAEVTENTEVEYFHKDVETFEQEYETVSSVDQSQINLF
EYFHISPIKLHLSVSLSSGREEAKESGQRGGLIPVHSLNLLLKSIGATLTDVQDVVFKLA
FIELNYQFRTTSELQSEVIRHYSKQAIKQMYVLILGLDVLGNPFGLIREFSEGVEAFFYE
PYQGAIQGPEEFVEGMALGLKALVGGAVGGLAGAASKITSAMAKGVAAMTMDEDYQQKRR
EAMNKQPAGLREGITRGGKGLVSGFVSGITGIVTKPIKGAQKEGAAGFFKGVGKGLVGAV
ARPTGGIIDMASSTFQGIKRATETFEVESLRPPRFFNEDGVIRPYRLREGTGNQMLQVME
NGRFAKCKYFTHVMINKTDMFMITRSGVLFVTKGTFGQLTCEWQYSFDEFTKEPFIVHGR
RLRIEAKERVKSVFHAKEFGKIINFKTPEDARWILAKLEEAREPSPSL
NT seq
9507 nt
NT seq
+upstream
nt +downstream
nt
atggtattcgagtccttggtcgtggacgtgttgaaccggttcctgggcgactatgtggtg
aacctggacaagtctcagctctctctgggcatttggaaaggagctgtggtcctcaagagc
cttgaaattaaagaaaatgcattgagtgaattggatgtaccattcaaagttaaggttggt
catataggtagtcttacacttaaaattccatggaaaaatctttatactcaaccagttgaa
gctgttttggaagaaatctatttacttatagtgccttcttctagaataaaatatgatcct
atcaaagaagaaaagcaactcatggaagcaaagcagcaggaactaaaaagaatagaagaa
gcaaagcagaaagtagttgatcaagaaaatcctccggaggagaaacaggacactttttca
gaaaaattaattacccaaatcataaaaaatcttcaagtgaaaatttccaatatccatgtt
cgttatgaagatgatatcacaaatcaagacaaaccactctcgtttggtatttcccttcaa
aatctcagcatgcagacaactgatcaaaattggattccatgtttacatgatgaaactgaa
aaactagttcgtaagctaattcgattagataatctctttgcttactggaatgtgaagtct
cagatgtattatctgaatgattatgatgaatcattggtactcttgaaaaatggtattgtc
aatgaaaacattgttccagatggttatgactttgtttttcgacctatatctgctaatgct
aagcttcagatgaaccggcgatcagattttgacttttctgaccccaaaataaacctggac
gttgagctacataccatagtgattgagtttaataaaccacagtatttcagtctcatggag
ctcctcgagtccattgacatgatgacacaaaacctgccctacagaaagttcaagcccagc
gtgcctcttcactaccatgccaaagaatggtgggcttatgctatacacggtattcttgaa
gtaaatgtttgtcctcgtttacggatgtggtcttggaagcatattagagatcatagacaa
aaagtgaaacaatatagagaatcttataagaaaaagttaacaagtaagaagccatctcct
gaaattctcatgtctttggaggagttggagaaaaccttggatgtttttaatataaccata
gctagacaacaggcagaagttgaggtaaagaaagctggatacaagatttacaaagaagga
gtaaaagatccagaggataatgcaggatggtttagctggctgtggacgtggtcagaatca
aatgctaaacaacaactagaagttaaacctggaattcttgaagaaatgttgacacctgaa
gaaaaagttttgctttatgaagcaattggttatagtgaaacagcagttgatccaaccttg
ccaaaaacatttgaagccttgaagttttttgttcacttgaaaagtatgtctgttattcta
agagaaaatcaccaaaaaccggagctggtaaacattatagtagaaggacttagtactttg
attgtgcaaaggccaggagcacaagccataaaatttgaaaccaaaattgattcattttat
attactggccttccagataattcaagaaaaccccacctattgtcttcattggatgatatg
tcactcttccagattacgtttgagacgaaccctttagatgaaactgttgctcagaggtgt
atcatagaggctgagcctttagagataatatacgatgcaaggacagtcaatagtatagtg
gagttcttcagacccccaaaagacgtccacctagcacaacttacctcagcaactttgaca
aaacttgaagaatttcgagataaaacagcaacaggtttgctgtatattattgaaacacag
aaagttcttgatctcagaattaatgtgaaggcttcatatgttattgtcccacagtatgga
atttttagccccaattcaaatctacttcttttggatcttggtcatttaaaggtgacaagt
aaaagtcgatcaggattaccagaaatgaaaccaagtaacactagccttgaagagataatg
catagagcttatgattcctttgatattcagcttacaagcatacagttgctttacagcaga
gtgggtgataactggaaagaagcacgaaagctcaatgtatcaacacagcatattttgaca
cctatgcacgtcaatgtagaactctctaaagccatggttttcatggatatcaagatgcct
aaattcaagatttctggaaaattacctcttatttcattacgaatctcggataaaaaacta
caagggattatggaattgcttgatagcattccaaaacctgaacccataactgatctgtct
gcccctgccaaatcattccagattcaagcatctactttgccagcatcacagatttctcag
aagttaatccctttattggaacagccttctgttgccgaagatgattcagaggaagaattt
tttgatgcaccatgtagtcccttggaagagtatcctcaaatcctatctagagttagaagt
cctcgacccaaaaaattacaaaagaaagactgttcagtgaatttaattcaacttaggatg
cgatttgaagtagcagaggttttgattcagttttatcaccttgtgggagactgtgaacta
ccggtgctagaaacgggtgttttaggattgggtactgaagttgagattagaacatttgat
ttgaaagcaaatgcctttttgaaagagttctggttaaaatgtccagaatacttagatgaa
aacaagaaaccaatttatttgatcaccaccctggataacacaatggaagatttgttaaca
ttggaatttgtgagggttgaaaaacatgcacccagtttaaaaagtacttataacaatgtt
ttacaacttattaaggtgaatttttcctctttggatattcatttacacactgaagcactt
ctcaatacaatgaattatcttaataatacccttccgcaattaggggaacaatctgcctca
gtgtctgttgcagagaccgaagacaaaggagatctcattaaaatgcttgctttaaagcta
cccacgaatgaagatactattaccttgcaacttttggccgaattgtcttgtttacggatt
tttattcaagatcagaaacaaaaaatttctgaaattaagattgaagggcttgattctgag
atgattatgaagccattagtcactgaaataaatgcaaaactaaggaatataattgtgtta
gattctgataaaatggctgtatacaaaaaggctgtttatatcactggaaaggaagttttc
agcttcaaaatgatttcttacatgaatgcaactgctggctctgcatacacagatatgaat
gtggttgatgttcaagttaatttaactgttggttgcattgaagtcgtgtttgtcacaaaa
ttcctatattctatattggcttttatagataattttcaagcagttaaaaatgcgttggct
gaagcaactgctcaagcagcaggaatggctgctgatggtgtaatggaactggctcaaagg
agttctaggctcgcattggatgttaacataaaagcccctattgtggtcatcccgcagtct
ccagtgtctcacaatgtttttgttgctgattttggcttaattacaatgaaaaatacattt
gttactgtaacagaaacccagagtaatctcccacctgtaattgatttgataacaatacaa
ttgagtgaaatgagactatacaggtctcagtttatgactactgcataccaggaagtgctt
gacctgctactacctttgaacctggaagtgattgttgagcgaaacttatcctgggaatgg
tacaaggaagttccttgtttaaatataaaagctcagctaaaacccatggagttcattctt
agtcaagaagatttaacaaccatctttcaaacattgtatggcaatatatggtatggacga
gatgtttctgtcccatcttctataagtaaagacaacgaaatcatgactagtggagcaaac
catgtttccaaccattcaggaggttccatggtgacagctgcggtggtggaggtccacccc
caggcctctcaggttaacactactctgaacgttagtttcaggactgattacctcaccatg
gcactttacagtccagggcctgaacaggccttctttacagatgttcgtgatccttctctg
aaacttgctgaatttaaattggagaatattataagtagtttgaaactgtatacagatggc
tctacattctgttcattctcattaaaaaactgtattttagatgataaaaggcctcatgtc
ataaaagccacacctagaatgatagggctgacacttgggtttgacaaaaaggacatggtg
gatgtaaagtatagaagaatcagagatgcttttgtgactgacgcagttgtgcaagagatg
tatgtttgtgcaagtgtggagtttctgatgactgttgcacatgtcttttttgatgcctac
atgactagtacggctttagaaaccagtgtccaagcatggactaccaaagaagaacctgca
caggatttagggaagtgggaaataaatattctaataaaaaaccctgagattgtctttgtg
gctgacatgacaaggaatgatgctcctgcgttagtcattacaacacagtgtgaaatttgc
tgtaaaggtgaccctgaaagcaatacagtaaccgctgccattaaagatctccaagtcaga
gcatgcccctttcttccagccaagagaaagggcaaaatcaccactgttttacagccttgt
gacttgttttatcaggctactcagataggaacagatccacaaataattgacatatcagta
aaatctctcacactaaaggtttcaccagttatcataaataccataataactattacgtca
gcactttatacaactaaggaacccatcccagaagaaaacacctcttccatagcacattta
tgggacaagcaggatactaagaatctgaaaatgtggtttcttgaagaatccaatgaaaca
gaaaaagtagttccatcaaatgaattgattccaggaggagagacactgaacttgaatatt
gattctatttttatagttctcgaagctggaattggtcatagaacagtgccgatgctgttg
gcaaagtcacgctttttgggagaaagcaaaaactggagtactttaataaatctccactgt
cagcttgagctggaagttcactactataatgaaatgtttggtgtttgggaacctttactg
gaacccttagaaattgatcagactgatgattttagaccgtggaatcttggaatcaagatg
aaaaagaaagcaaaagagtccatcgttgagtcagatagtgaagaagaaaactacaaagta
ccagaatataaaactgttataagtttttattctaaagaccaattaaacattacattatcc
aagtgtggccttgtgatgttaaataatttagtcgaggcatttactgaagctgctactgga
tcgtcagctgtcttcctaagggatctagcaccatttatgattttaaattctcttggactt
actgtctctgtttcaccaagtgattcttttaatgtacttaatgttcctatggcaaaatca
tatgagctgaaaaatgaagagagtttaagtatggattatgtacgaactaaggacagtgat
catttcagtgcaatgaccagcctaagcagcaaactcttcttcattatcctcacacctgtt
aaccactctgctgctgacaagattccgttaacaaaagtgggacggcgtctgtatacagta
agacacagggagtctggagttgaaagatctattgtttgtcaaattgacacagttgaagga
agtaagaaggtaacaatccgctcaccagtgcagattaagaatcatttttcaattccaatt
tccgtttttgaaggggatacgttattaggaattgcttcacctgaaaatgaattcaacata
ccattagcatcttaccgatcatcgctttctttgaagccagatgataaggactaccaaatg
tgtgaaggaattgactttgaagaaatcataaaatatgatggacaacttctaaggaagaaa
tgcaaatctatacacgcttctaagagatcatttgttattaatattgtcccagaaaaagat
aatttgacttctctgtcagtgtattcagaagacggctgggacttaccatatgtaatgcac
ttgtggccacctatcctcattcggaatcttcttccctacaaaattgcttattacctagag
ggcattgaaaacacagtttttactttaagtgaaggacattcatcacaaatttataatgtt
gaaatggacaaagccaagctgcacttaaaattgcttgactatcttaatcatgattggaaa
agtgaatttcatataaaacctaatcaacaagacatcaatttcatcaactttacctgtctc
acagaaatggaaaagactgatttggatattgctatccacatgacttacaatactggtcag
acaattgtggcatttcatagtccatattggatggtcaataaaactaatcggatgttacag
tacaaagcagatggaatccaccgaaagcatccacctaattataaaaagccagttctcttt
tcctttcagccaaaccacttttttaacaacaataaggttcagcttatggtaactgacagt
gagctctctgatcagttctcaattgatactgttggtagtcatggagccattaaatgcaaa
ggcctgaaaatggaataccaagttggtgtcactataaacctcagcagttttaatattacc
agaattgtggtatttactcctttttatatgattaaaaataaaagcaaataccatatatca
gtggcagaagaaggaagtgataaatggctctctcttgacttagatcagtgtatccccttc
tggcctgaggatgcctccaatattcttctcattcaagttgaaagaagtgacggtcccccc
aaaaggatacattttaacaagcaagacagttgtattttattacgactgaataatgagctt
ggaggaattattgcagaagttaatttggctgagcactctacagttattacattttcagat
taccatgacggtgcagctacattcctactaataaatcataccaagaatgaccttgttcag
tacaagcagagttctctcagtgaaatagaagattcccttcctcctggaaaagcagtatat
tatacatgggctgatccagtgggttctagaaagctgaagtggagttgtgggcaaagtcat
ggtgaagtaacacataaggatgatatgatgacccctataagtgtggggaaaaaaaccatt
tatttagtgtcattctttgaaggtttgcagcgtattattctattcactgaagacccaaaa
gtgtttaaagtaacatatgaaagtgaaaaagcagagttagcagagcaagaaatcgtactg
gcattacaagatgttggaatttcacttgtcaataattatacaaaacaagaagtagcctat
ataggcattacaagttctgatgtggtttgggagacaaaaccaaagaaaaaagcaaggtgg
aggccaatgagtataaaacacactgagaagctggagaaagagttcaaggaatacacagaa
tcttcacctttggaagacaaggttattgagttggacaataacattccggttcgcttaaca
cctagtggcaatgacatgaaaattctgcaaccacacgtgatagctgtacggagaaattac
ctcccagcactaaaagtagaatataacacatctgcacaccagtcatcgttcagaattcag
atttatagaatacagatccaaaaccagattcatggtgctatttttcctttcgtgttttat
cctattaaaccgccaaagtctgtcaccatggactcagcaccaaagccctttacagatgtt
agcattgtcatgagatctgcaggacattcccaaatatcacgcattaagtatttcaaagtg
ttgattcaagaaatggatctcagattggatcttgggtttgtgtatgccatagcagacctt
gtcacaaaagctgaggtgactgagaacacagaggttgaatattttcataaggatgtagaa
acatttgaacaagagtatgaaacagtttcttcagtagatcaatctcaaatcaatctcttc
gagtatttccatatatctcctatcaagttgcatttgagtgtttcactgagctctggtaga
gaagaagctaaagagtcaggacaacgtggaggactgattcctgttcattctttaaatctt
ttgctgaagagtattggtgccacccttacagatgtgcaagatgtagtttttaaacttgcc
tttattgaactcaactaccagttccgtacaacatctgaactgcaatctgaagtaataaga
cactattcaaaacaggctattaagcaaatgtatgtactcattctcggacttgatgttttg
ggaaatccctttggcttaattagagaattttcagaaggcgtagaagcatttttttatgaa
ccttaccagggagccatccagggtcctgaagagtttgtggagggaatggcactaggactg
aaagccctggttggcggagccgttggtgggctagctggtgctgcctccaaaatcaccagt
gcaatggctaaaggagtagcagccatgacgatggatgaagactaccagcagaaaagaagg
gaagcaatgaataaacagccagctggccttagagaaggcatcactcgtggaggaaaaggc
ctggtttctggttttgtaagtggcattacggggattgttacaaaaccaattaaaggtgct
caaaaggaaggtgctgcgggtttcttcaaaggcgtcgggaaaggtttagttggagcagtg
gcaaggccaacaggtggcatcatagacatggccagcagtacctttcaggggatcaaaaga
gctacagagacttttgaagtagaaagtttgcgacctccccggttctttaatgaagatgga
gttatccgaccttataggctgagggagggtacaggaaatcagatgttacaggtcatggaa
aatggaagatttgcaaaatgcaagtattttacccatgtcatgatcaacaaaacagatatg
ttcatgataacgagaagtggtgtgttgtttgtaacaaagggaacatttggacaacttaca
tgtgaatggcagtatagttttgatgaatttaccaaagagccattcattgttcatgggaga
agattgcgtattgaagcaaaggaacgagtgaaatctgtatttcatgccaaagaatttggg
aaaataattaacttcaagactccagaggatgctaggtggatcctggcaaagctggaagaa
gcaagagaaccatctccgagcctgtga
DBGET
integrated database retrieval system
