Alexandromys fortis (reed vole): 126510858
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Entry
126510858 CDS
T08493
Name
(RefSeq) probable ATP-dependent RNA helicase DDX20
KO
K13131
ATP-dependent RNA helicase DDX20 [EC:
5.6.2.7
]
Organism
mfot
Alexandromys fortis (reed vole)
Brite
KEGG Orthology (KO) [BR:
mfot00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
mfot03041
]
126510858
Enzymes [BR:
mfot01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
126510858
Spliceosome [BR:
mfot03041
]
Other splicing related proteins
Proteins involved in snRNP biogenesis
SMN complex factors
126510858
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
AAA_30
Motif
Other DBs
NCBI-GeneID:
126510858
NCBI-ProteinID:
XP_050013527
LinkDB
All DBs
Position
Unknown
AA seq
825 aa
AA seq
DB search
MAAAFEAPAALATAESAMAAEREPVPVPAAEPTPGSPWSLRTAHDIGGPRTRTGDVVLAE
PADFESLLLSRPVLEGLRAAGFERPSPVQLKAIPLGRCGLDLIVQAKSGTGKTCVFSTIA
LDSLILENYSTQILILAPTREIAVQIHSVITAIGIKMEGLECHVFIGGTPLSQDKTRLKK
CHIAVGSPGRIKQLIELDYLNPGSIRLFILDEADKLLEEGSFQEQINWIYSSLPASKQML
AVSATYPEFLANALTSYMRDPTFVRLNPSDPSLIGLKQYYHVVNSYPLAHKIFEEKSQHL
QELFSRIPFNQALVFSNLHSRAQHLADILSSKGFPTECISGNMNQNQRLDAMAKLKQFHC
RVLISTDLTSRGIDAEKVNLVVNLDVPLDWETYMHRIGRAGRFGTLGLTVTYCSRGEEEN
MMMKIAQKCNINLLPLPDPVPPGLMEECLDCDVEVKAALHTHRVPSLPTQTPKKQVQKPE
RAFQTQRIPGNQMSSPRNTSVSTLSDKSKHSSKQKPPVKSPSECGIIEKAAPPEELGCNT
QPEEQVKSSDQTAAEDFSSSSQQQAREASSGPLPKIPCLSSFKVHQPCTLTFAELVEDYE
HYIKEGLEKPVEIIRHYTGPGAQTVNPHNGFVRNRISEDRAQILASSSQSGDSESESDSC
SSRTSSQSKGAKSYLEGSSDTQLKDSECTPVGGPLPLEQVVNGNDAPSQVECQESPETPV
KARHKEGASQRSKQSRRNPLRRSSYRAQTEPQEEAWYDCQRETEASFSDTYQDYEEYWRA
YYRAWQEYYAVASHSYYWNAQRHPSWMAAYQMNTAYLQEMMRSNQ
NT seq
2478 nt
NT seq
+upstream
nt +downstream
nt
atggcggcggcatttgaagccccggcggccctggcaaccgcggagtcagctatggctgcg
gagcgtgagcccgtgccggtcccggctgcggagccaacccccggctccccgtggagcttg
cggacggctcacgacatcggcgggccgcggacgcgtacaggggacgtggtgctggcggag
ccggcggatttcgagtcgctgctgctgtcgcggcccgtgctggaggggctgcgggcggcc
ggcttcgagaggccgtctcccgtgcagctcaaggccatcccgctcgggcgctgcgggctc
gatttaattgttcaagccaagtctggcactgggaaaacttgtgtattctccaccattgct
ctagactctcttattcttgaaaactatagtactcagattttgatattggctcctacaaga
gaaattgctgttcagatacattctgttatcacagccattggaataaaaatggaagggtta
gaatgtcacgtctttattggagggaccccgttatcgcaagacaaaacaagacttaaaaag
tgtcatattgctgttggctctcctggtagaattaaacagctgatagaacttgactacctg
aatccgggcagtatccgtctctttattcttgatgaagcagataagcttttagaagaaggc
agtttccaggagcaaataaattggatttactcttctttacctgctagtaaacagatgttg
gcagtatctgctacttaccctgaatttttggctaatgctttgacaagttatatgagagat
cccacatttgtaaggttgaaccccagtgacccgagcctcataggtttgaagcaatattac
cacgtggttaattcttaccctttggcgcataagatttttgaggaaaagagtcagcattta
caggaactttttagtagaatcccatttaatcaagccttggtgttttctaatttgcacagc
agagctcaacatttggctgatatcctttcttctaaaggttttcctactgaatgcatttca
ggtaacatgaaccagaatcagcgccttgatgctatggctaaactgaaacagtttcattgc
agagttctcatttctacagatttgacttcccgtgggattgatgctgagaaggtgaatctg
gtagtaaatctggatgttccgttagactgggagacatacatgcatcggattggcagagct
ggccgctttggtaccttgggactgacagtgacctactgctctaggggggaggaagaaaac
atgatgatgaaaattgcccagaaatgtaacatcaaccttctccctttaccagaccccgtt
cctcctggcctgatggaagaatgcttggactgcgatgtggaggtcaaagctgcactgcat
acacacagagtaccaagtctacctacccagactcccaaaaagcaagttcagaaaccagag
agagccttccagactcaaagaattcctggtaaccaaatgtcttcccctagaaacacttct
gtatctacactctcagacaaatcaaagcatagtagcaaacagaaacctcctgtgaaaagc
ccctcagagtgtgggatcatagaaaaggctgctccaccggaagagttgggctgtaacaca
caaccggaagagcaagtgaagagttctgatcagaccgctgctgaggacttctccagtagc
agccagcagcaggccagagaagcctcatctgggcccctccccaaaatcccttgtctctcc
tccttcaaagttcatcagccatgtactttgacttttgcggaactggtagaggattacgag
cactacattaaagaggggttagagaagcctgtggaaattatccggcactacacggggcct
ggggctcagactgtgaatcctcacaatggttttgtgcgaaatcgcatctctgaagataga
gcacagatactggcgagtagtagccagtctggggactcagagagtgagagcgattcttgc
agctcaaggacttcttcccagagcaagggcgctaagtcgtatttggaaggctcttctgac
actcagttgaaagactccgaatgtacacctgtgggcggaccgctccctttggaacaggtt
gtgaatggaaatgatgccccaagtcaagtggagtgtcaggagtctcctgaaaccccagtg
aaggcaaggcataaagaaggagctagccagagatctaagcagagtcggagaaatccacta
cggcgctcctcttaccgagcccagacagaaccccaggaggaggcttggtatgactgtcag
agggaaacagaggcgagtttctccgatacctaccaggattatgaggagtactggagggca
tattacagggcgtggcaagaatattatgctgttgcttcccactcgtactattggaatgct
cagagacatcccagttggatggctgcctaccagatgaatacagcgtatctccaagaaatg
atgcgcagtaaccagtga
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