Alexandromys fortis (reed vole): 126511149
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Entry
126511149 CDS
T08493
Name
(RefSeq) TATA-binding protein-associated factor 172 isoform X1
KO
K15192
TATA-binding protein-associated factor [EC:5.6.2.-]
Organism
mfot
Alexandromys fortis (reed vole)
Brite
KEGG Orthology (KO) [BR:
mfot00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mfot03021
]
126511149
Transcription machinery [BR:
mfot03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Others
126511149
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DUF3535
SNF2-rel_dom
HEAT
Helicase_C
HEAT_EF3_N
Vac14_Fab1_bd
TOR1L1_N
HEAT_2
TPR_Trm732_C
Cnd1
UTP20
ARM_ECM29
Rac1
Motif
Other DBs
NCBI-GeneID:
126511149
NCBI-ProteinID:
XP_050014051
LinkDB
All DBs
Position
Unknown
AA seq
1848 aa
AA seq
DB search
MAVSRLDRLFILLDTGTTPVTRKAAAQQLGEVVKLHPHELNNLLSKVLIYLRSANWDTRI
AAGQAVEAIVKNVPEWNPVPRTKQEPTESSMEDSSTTDRLNFDRFDICRLLQHGASLLGS
AGAEFEVQDEKSGEVDPKERISRQRKLLQKKLGLNMGEAIGMSTEELFNDEDLDYTPTSA
ALVNKQSTLQAAELIDSEFRAGMSNRQKNKAKRMAKLFAKQRSRDAVETNEKSNDSTDGE
PEEKRRKVANVVINQTTTDSKVLVDNVPESSSIIEETNEWPLESFCEELCNDLFNPSWEV
RHGAGTGLREILKAHGKSGGKMGDSTLEEMIQQHQEWLEDLVIRLLCVFALDRFGDFVSD
EVVAPVRETCAQTLGVVLKHMNETGVHKTVDVLLKLLTQEQWEVRHGGLLGIKYALAVRQ
DVINTLLPKVLTRIIEGLQDLDDDVRAVAAASLVPVVENLVYLQTQKVPSIINTLWDSLL
ELDDLTASTNSIMTLLSSMLTYPQVQQCSIQQSLTVLVPRVWPFLHHTISSVRRAALETL
FTLLSTQDQNSSSWLIPILSDMLRHIFQFCVLESSQEILDLIHKVWMELLSKASVQYVVA
AACPWMGAWLCLMMQPSHLPIDLNMLLEVKAKAKEKTGGKIRQGQIQNKEVLQEYIAGAD
TIMEDPATRDFVVMRARMMAAKLLGALCCCICDPGVNMVNQEIKPAESLGQLLLFHLNSK
SALQRISVALVICEWAALQKECKAVTLAVQPRLLDILSEHLYYDEIAVPFTRMQNECKQF
ISSLADAHIEVGNRINNNVLTIDQANDLVTTVFNEVTSTFDLNPQVLQQLDSKRHQVQMT
VAETNQEWQVLQLRVHTFAACAVVSLQQLPEKLNPIIKPLMETIKKEENTLVQNYAAQCI
AKLLQQCTARTPCPNSKIIKNLCSSLCVDPYLTPCVTCPVPTQSGQENSKGSNSEKDGMH
HTVTKHRGIITLYRHQKAAFAITSRRGPIPKAIKAQIAELPAGSSGNVLVELDEGQKPFL
VQRRGAEFALTTIVKHFGAEMAVKLPHLWDAMVGPLKAMIDLNNFDGKSLLERGDGPAQE
LVNSLQVFEIAAASMDSALHSLLVQHLPHLYMCLQYPSTAVRHMAARCIGVMSKIATMET
MNIFLEKVLPWLGAIDDNVKQEGAIEALACVMEQLDVGIVPYIVLLVVPVLGRMSDQTDS
VRFMATQCFATLIRLMPLEAGIPDPPNMSEELIQLKAKERHFLEQLLDGKKLENYRIPVP
INAELRKYQQDGVNWLAFLNKYKLHGILCDDMGLGKTLQSICILAGDHCQRAQEYARSKL
AECMPLPSLVVCPPTLTGHWVDEVGKFCSREYLNPLHYTGPPTERIRLQHQVKRHNLIVA
SYDVVRNDIDFFRNIKFNYCILDEGHVIKNGKTKLSKAVKQLTANYRIILSGTPIQNNVL
ELWSLFDFLMPGFLGTERQFAARYGKPILASRDARSSSREQEAGVLAMDALHRQVLPFLL
RRMKEDVLQDLPPKIIQDYYCTLSPLQVQLYEDFAKSRAKCDVDETVSSAALSEETEKPK
LKATGHVFQALQYLRKLCNHPALVLTPQHPEFKSTTEKLAVQNSSLHDIQHAPKLSALKQ
LLLDCGLGNGSTSDSGTESVVAQHRILIFCQLKSMLDIVEHDLLKPHLPSVTYLRLDGSI
PPGQRHSIVSRFNNDPSIDVLLLTTHVGGLGLNLTGADTVVFVEHDWNPMRDLQAMDRAH
RIGQKRVVNVYRLITRGTLEEKIMGLQKFKMNIANTVISQENSSLQSMGTDQLLDLFTLD
KDGKAEKADSSTSGKASMKSVLENLSDLWDAEQYDSEYNLETFMRSLE
NT seq
5547 nt
NT seq
+upstream
nt +downstream
nt
atggcggtctccagactcgatcgtctttttatcctactggatactggtactactccagtt
acaagaaaagctgctgcacagcagcttggagaagtagtgaagcttcatcctcatgaacta
aataatttgttatctaaggtattaatatatttaaggagtgcaaattgggatactcggatt
gctgcaggacaagctgttgaagccatagtgaaaaacgtgcccgagtggaatccagtgcca
agaaccaaacaagaacctacagaaagttctatggaagattcatctactacagatcgacta
aattttgacagatttgatatatgcagattgttacagcatggtgcatcacttttggggtct
gctggtgcagaatttgaagtccaagatgaaaaatcaggtgaagtggatcctaaagagaga
atatcacgtcaacggaaattattacagaagaaacttggacttaatatgggagaagcaatt
ggaatgagtactgaagaactcttcaacgatgaagatttggattacaccccaacttcagca
gcccttgtaaacaaacaatctactcttcaggcagctgaattgatagattcagaattccga
gcaggaatgagtaatagacagaagaacaaagctaaaagaatggccaagttatttgcaaaa
cagagatccagggatgcggtagaaacaaatgagaaaagtaatgacagcactgatggagag
ccagaagaaaagagacggaaagtagcaaatgttgttattaatcagactactactgattcc
aaagtcttggttgataatgttccagaaagttcttccataattgaggagacaaatgaatgg
cctttggaaagtttctgtgaagaactttgcaatgatctttttaatccctcctgggaggtt
cgacatggggcaggtactggacttagagaaattcttaaagctcatgggaaaagtggtggt
aaaatgggagacagcactttagaagagatgattcagcagcatcaagagtggttggaggac
ttagtcattagactcctttgtgtttttgccttggacagatttggagactttgtttctgat
gaagttgtagcacccgttcgtgaaacttgtgctcaaacattaggtgtggttttaaagcac
atgaacgaaacaggagttcataagacagtggatgtgctactgaaattactgacccaagaa
cagtgggaagttagacatggtggtctgctgggaataaaatatgctttggcagttcgtcag
gatgtaattaatactttattgcctaaagttttaactcgaataattgaaggactccaggac
cttgatgacgatgtcagagctgttgcggcagcatccttagtgcctgtggtagaaaacctt
gtctaccttcagacacaaaaggtaccctccattataaataccttatgggattctctcctg
gaattagatgatctaacagcttcaacaaatagtattatgactcttctttcatcaatgtta
acttaccctcaggtccagcaatgcagtattcagcagtctctcacagttctagttccacgt
gtctggccatttctgcatcacactatatcttcagtccggagagcagcactggaaactctc
tttacattgttgtcaacacaggaccagaactcttcatcttggcttatacccatcctgtct
gatatgctgcgacacatttttcagttttgtgttttagaaagcagccaggaaattctggat
cttattcataaggtttggatggaactgttgagcaaggcttcagttcagtatgtggtagca
gctgcttgcccatggatgggcgcttggctttgcttaatgatgcagccttctcatttacct
attgatttaaatatgttgctagaagtaaaagctaaagccaaggaaaaaacaggtggtaag
atacggcaaggccaaatccagaataaggaagtgcttcaggagtacattgcaggtgcagac
accatcatggaagacccagctacgagggattttgtagttatgcgggccaggatgatggca
gctaagttgttaggagcactttgttgctgtatttgtgatccaggtgtaaatatggtaaac
caagaaattaaaccagcagaatcccttggccagttacttctattccatttgaactccaaa
tctgctttacagagaattagtgttgcattagtgatatgtgaatgggccgctttacaaaag
gagtgtaaagctgttaccctagctgtgcagccacgtttacttgatatcctttcagaacat
ttgtattatgatgaaattgctgttccattcacaagaatgcagaatgaatgtaaacagttt
atatcatcactagctgatgcacatattgaagttggtaatagaataaacaacaatgtttta
acaatagatcaagctaatgacctggtaactactgtttttaatgaagtcacatcaactttt
gatctaaatcctcaagtgttacagcagttagatagtaaacgccatcaggtccaaatgaca
gttgcagagacgaaccaagagtggcaagtgttgcagttgagagtgcatacttttgctgca
tgtgcagttgtgagcttgcagcaacttccggagaagttaaatcctatcataaaaccacta
atggaaacaattaaaaaagaagagaatacgctagtacagaactatgctgctcagtgcata
gctaagcttcttcagcagtgtacagcaaggacaccatgtcctaattcaaaaattattaaa
aacctctgtagctctctttgtgtggacccatacctcactccctgtgtaacatgtccagta
ccaacacagagtggccaggaaaattctaaaggctccaactcagaaaaagatgggatgcac
catactgtcaccaaacacagaggtatcattacactctatcggcatcagaaagcagctttt
gctatcacaagcaggcgaggtcctatccccaaagcaatcaaagctcagatcgcagagctg
cctgcggggagtagtgggaatgtcctggttgaacttgatgagggtcagaagcctttcctg
gtacagcggagaggagctgaatttgcgttaacaactatagtgaagcattttggtgctgaa
atggcagtgaagttgccacatctttgggatgctatggttggcccattgaaggctatgatt
gacctaaataatttcgatggaaagtccctcctggaaagaggtgatggtcctgctcaagaa
ttggtaaattccctgcaggtttttgaaatagcagcagcttcgatggattctgcgcttcat
tccttgctggtccagcatttgcctcatttgtatatgtgccttcagtaccccagcactgca
gtgaggcacatggcagctcgctgcataggtgtcatgagcaaaatagctaccatggaaaca
atgaacatttttttagagaaggtactcccatggctgggagcaattgatgacaatgtcaaa
caagaaggtgcaattgaagcacttgcctgtgttatggaacagttggatgttggtattgtt
ccatatattgtccttttagttgttcctgtgttgggaagaatgagtgaccagacagacagt
gtgaggttcatggctactcagtgctttgcaacattaattagactgatgccactcgaggca
ggcattccagaccctccaaacatgtctgaagaattaatccagttgaaagcaaaagagcga
cactttttagagcaattattagatgggaagaagttagaaaattacaggattccagtgcca
atcaatgctgagctgaggaagtaccagcaggatggtgtgaactggttagcctttcttaat
aaatataagcttcatggaattctgtgtgatgacatgggcttaggaaaaacattacagtcc
atctgtattctagctggagatcattgtcagagggcccaggaatatgcaagatcgaaattg
gcagaatgtatgccacttccttccttggtggtttgcccacccacgttaacaggtcactgg
gtagatgaagtaggtaaattttgctcaagagaatatctcaatccattgcattatactggc
cctcctactgaaaggataaggttgcagcatcaagtaaaaaggcataatctgatagtagct
tcatatgatgttgtgagaaatgacatagacttttttagaaatattaaatttaactactgt
attcttgatgaaggccatgtcataaaaaacggaaaaaccaaattgtcaaaagcagtaaaa
cagctgactgctaactataggattattctttccggaacaccaatccagaacaacgttttg
gagttgtggtcactgtttgatttccttatgcctggatttttgggtactgaacgccagttt
gctgctcgatatggtaaacctatattagcgagtagggatgcacgaagctccagtcgagaa
caagaagcaggtgttcttgcaatggatgcactgcaccgccaagtcctgccattccttttg
agaagaatgaaagaagatgtcttgcaggatcttccacctaaaattattcaagactattac
tgtactcttagccctctccaggttcaactttatgaagattttgctaagtctcgtgccaag
tgtgatgtggatgagactgtgtcttcagctgcactttcagaagaaactgagaaaccaaag
cttaaagctacaggtcatgtattccaggcattacaatatttacgtaaactgtgcaaccat
ccagcattggtcttaacccctcagcatccagaattcaagagcactactgaaaaactggct
gttcagaattcttcacttcatgatattcagcatgcccctaaactctccgctttgaaacag
ttgctgttggattgtggtttgggaaacggcagcacttcagacagtggcacagagtctgtg
gtggcccaacacagaatactgatcttctgtcagctaaaaagcatgcttgatatagttgag
catgacctgctgaagcctcacctaccctctgtcacttacttgagactagatggcagcata
cctcctggacagaggcattccattgtttcccggtttaacaatgacccatccattgatgtt
cttttacttacaactcatgttggtggcctagggcttaacctgactggtgctgacactgtg
gtgtttgtggaacacgactggaaccctatgcgagatctacaggccatggaccgggcccat
cgcattgggcagaaacgtgtggttaatgtctatcggctgataaccagaggaacactagaa
gagaagataatgggcttgcagaaattcaagatgaacatagcaaataccgttattagccaa
gagaattctagtttacagagtatggggacggatcagcttcttgacttgtttactctggat
aaggatggcaaagcagaaaaggctgacagctctacttctgggaaagcgagcatgaaatca
gttctggaaaacctgagtgacctctgggacgccgagcagtacgattccgagtacaacctg
gagactttcatgcgctctctcgagtaa
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integrated database retrieval system
