Alexandromys fortis (reed vole): 126512638
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Entry
126512638 CDS
T08493
Name
(RefSeq) probable global transcription activator SNF2L2 isoform X1
KO
K11647
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 2/4 [EC:5.6.2.-]
Organism
mfot
Alexandromys fortis (reed vole)
Pathway
mfot03082
ATP-dependent chromatin remodeling
mfot04714
Thermogenesis
mfot05225
Hepatocellular carcinoma
Brite
KEGG Orthology (KO) [BR:
mfot00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
126512638
09150 Organismal Systems
09159 Environmental adaptation
04714 Thermogenesis
126512638
09160 Human Diseases
09162 Cancer: specific types
05225 Hepatocellular carcinoma
126512638
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mfot03021
]
126512638
03036 Chromosome and associated proteins [BR:
mfot03036
]
126512638
Transcription machinery [BR:
mfot03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
126512638
Chromosome and associated proteins [BR:
mfot03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
REST complex
126512638
Chromatin remodeling factors
BAF complex
126512638
PBAF complex
126512638
GBAF(ncBAF) complex
126512638
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
SnAC
Bromodomain
HSA
BRK
QLQ
ResIII
HDA2-3
DEAD
Motif
Other DBs
NCBI-GeneID:
126512638
NCBI-ProteinID:
XP_050016468
LinkDB
All DBs
Position
Unknown
AA seq
1591 aa
AA seq
DB search
MSTPTDPAAMPHPGPSPGPGPSPGPILGPSPGPGPSPGSVHSMMGPSPGPPSVSHPMSTM
GSADFPQEGMHQMHKPMDGIHDKGIVDDVHCGSMKSTSLRTPHPGMGPPQSPMDQHSQGY
MSPHPSPLGAPEHVSSPISGGGPTPPQMPPSQPGPLIPGDLQQAMNQPNRGPSPFSPVQL
HQLRAQILAYKMLARGQPLPETLQLAVQGKRTLPGMQQQQQQQQQQQQPQQQQQQQQQQP
QQQAQPQQQQQQPALVSYNRPSGPGQDLLLSGQSTPQKLSAPAPSGRPSPAPPATAQPTA
TAVPGPSVQQPAPGQPSPVLQLQQKQSRISPIQKPQGLDPVEILQEREYRLQARIAHRIQ
ELESLPGSLPPDLRTKATVELKALRLLNFQRQLRQEVVACMRRDTTLETALNSKAYKRSK
RQTLREARMTEKLEKQQKIEQERKRRQKHQEYLNSILQHAKDFKEYHRSVAGKIQKLSKA
VATWHANTEREQKKETERIEKERMRRLMAEDEEGYRKLIDQKKDRRLAYLLQQTDEYVAN
LTNLVWEHKQAQAAKEKKKRRRRKKKAEENAEGGESALGPDGEPIDESSQMSDLPVKVTH
TETGKVLFGPEAPKASQLDAWLEMNPGYEVAPRSDSEESDSDYEEEDEEEESSRQETEEK
ILLDPNSEEVSEKDAKQIIETAKQDVDDEYSMQYSARGSQSYYTVAHAISERVEKQSALL
INGTLKHYQLQGLEWMVSLYNNNLNGILADEMGLGKTIQTIALITYLMEHKRLNGPYLII
VPLSTLSNWTYEFDKWAPSVVKISYKGTPAMRRSLVPQLRSGKFNVLLTTYEYIIKDKHI
LAKIRWKYMIVDEGHRMKNHHCKLTQVLNTHYVAPRRILLTGTPLQNKLPELWALLNFLL
PTIFKSCSTFEQWFNAPFAMTGERVDLNEEETILIIRRLHKVLRPFLLRRLKKEVESQLP
EKVEYVIKCDMSALQKILYRHMQAKGILLTDGSEKDKKGKGGAKTLMNTIMQLRKICNHP
YMFQHIEESFAEHLGYSNGVINGAELYRASGKFELLDRILPKLRATNHRVLLFCQMTSLM
TIMEDYFAFRNFLYLRLDGTTKSEDRAALLKKFNEPGSQYFIFLLSTRAGGLGLNLQAAD
TVVIFDSDWNPHQDLQAQDRAHRIGQQNEVRVLRLCTVNSVEEKILAAAKYKLNVDQKVI
QAGMFDQKSSSHERRAFLQAILEHEEENEEEDEVPDDETLNQMIARREEEFDLFMRMDMD
RRREDARNPKRKPRLMEEDELPSWIIKDDAEVERLTCEEEEEKIFGRGSRQRRDVDYSDA
LTEKQWLRAIEDGNLEEMEEEVRLKKRKRRRNVDKEPVKEDVEKAKKRRGRPPAEKLSPN
PPKLTKQMNAIIDTVINYKDRCNVEKVPCNSQLEIEGNSSGRQLSEVFIQLPSRKELPEY
YELIRKPVDFKKIKERIRNHKYRSLGDLEKDVMLLCHNAQTFNLEGSQIYEDSIVLQSVF
KSARQKIAKEEESEEESNEEEEEDDEEESESEAKSVKVKIKLNKKEEKGRDTGKGKKRPN
RGKAKPVVSDFDSDEEQDENEQSEASGTDDE
NT seq
4776 nt
NT seq
+upstream
nt +downstream
nt
atgtccacacctacagacccagctgcgatgccccacccggggccctccccagggcccgga
ccctctcctggaccaattctgggacctagtccaggaccaggaccatctccaggttctgtc
cacagcatgatggggcccagtcctggaccccccagtgtctcacatcctatgtcaacaatg
ggctccgcagacttcccacaggaaggcatgcaccaaatgcataagcccatggatgggata
catgacaaggggattgtcgacgatgtccactgtggatctatgaagagcaccagcctgcgg
acaccacacccaggaatgggccctccacagagcccaatggatcagcacagccaaggttat
atgtcgccacacccgtctcctttgggagccccagagcacgtctccagcccgatctctgga
ggaggcccaaccccaccccagatgccaccgagccagccagggccactcatcccaggagat
ctgcagcaggccatgaaccagcctaacagaggaccctcgcctttcagtcctgtccagctg
catcagcttcgagctcagattttagcttacaaaatgttggccaggggccagcccctcccc
gaaacactgcagcttgcagtccaggggaaaaggaccttgcctggcatgcagcaacaacaa
cagcagcagcagcagcaacagcagcctcagcagcaacagcagcagcagcaacagcagcct
cagcagcaggcgcagccacagcaacagcagcagcagccagcccttgttagctacaacaga
ccatctggccccgggcaggacctgctgctgagtggccagagcaccccacagaagctgtca
gcaccagcacccagtggccgaccctcacccgcacccccagccactgcccagcccacggcc
acagctgtgcccgggccctccgtgcagcagcctgccccggggcagccgtctccggtcctg
cagctgcaacagaagcagagccgtatcagtcccatccagaaaccgcaaggcctcgacccc
gtggagatcctgcaggagcgagagtacagacttcaggctcgcatagctcacaggatacaa
gaactggaaagtctgcctggctctttgccaccagatttacgaaccaaagcaacggtggag
ctgaaagcgcttcggttactcaatttccagcgtcagctgagacaggaggtcgtggcttgc
atgcggagggataccaccctggagacggccctcaactccaaagcgtacaagcggagcaag
cgccagacgctgcgcgaagcacgcatgacagagaagctggaaaagcaacagaagatcgaa
caggagaggaaacgccggcagaagcaccaggaatacctgaacagtattttgcagcatgcg
aaagattttaaggaatatcatcggtccgtggctgggaagatccagaaactgtccaaagca
gtggccacttggcatgctaacacggaaagggagcaaaagaaggagacagagcggatcgag
aaggaacgaatgcggaggctgatggctgaggacgaagagggctacaggaagctcattgac
caaaagaaagacagacgcctagcgtacctactgcagcagactgatgagtatgtggccaat
ctgaccaacctggtttgggagcacaagcaggcccaagctgccaaagagaagaagaagagg
aggaggaggaagaagaaggccgaagagaatgcagagggaggggagtctgccctgggacca
gatggagagccgatagacgaaagcagccagatgagtgacctgcctgtcaaagtgacacac
acggaaactggcaaggtcctctttggacccgaagcgcccaaagcaagtcagttggatgcc
tggctggagatgaatcctggttatgaagttgctccccggtctgacagtgaagagagtgac
tccgattatgaggaagaggatgaagaagaggagtccagtaggcaggaaactgaagagaag
atactgctggatccaaacagcgaggaagtttccgaaaaggatgccaagcagatcattgag
actgccaaacaggacgtggatgatgaatacagcatgcagtacagtgccagagggtcacag
tcctactacacggtggctcatgctatctctgagagggtagagaagcagtccgccctcctc
attaacggcaccctaaagcattaccagctccagggcctggaatggatggtttccctgtat
aataacaatttgaatggaatcttagctgatgaaatggggctaggcaagaccatccagacc
attgcactcatcacgtacctgatggagcacaaaagactcaacggcccctatctcatcatt
gttccgctctcgactctgtctaactggacatatgaatttgacaaatgggctccttctgtg
gtgaaaatttcttacaagggtacccctgccatgcgacgctcccttgttccccagctgcgg
agtggcaaattcaatgtcctcctgactacttatgagtacattataaaagacaagcacatt
cttgcaaagattcggtggaaatacatgatcgtggatgaaggccaccgaatgaagaatcac
cactgcaaactgactcaggtcttgaacacacactatgtcgcccccagaaggattcttttg
accgggacaccactacagaataagctcccagaactctgggccctcctcaacttcctcctc
cctacaatcttcaagagttgcagcacattcgagcagtggtttaatgctccatttgccatg
actggcgaaagggtggacctgaatgaagaagaaactattttgatcatcaggcgtctgcac
aaggtgttgagaccctttttactgaggagactgaagaaagaggttgaatctcagcttcca
gaaaaggttgagtatgtgatcaaatgcgacatgtcagctctgcagaagattctgtatcgt
cacatgcaggccaaggggatcctcctcacagacggctctgagaaggataagaaggggaaa
ggaggagccaagacacttatgaacactatcatgcagctgaggaagatatgcaaccaccca
tatatgtttcagcacattgaggaatcctttgctgaacacctgggctactccaatggggtc
atcaatggggctgagctgtatcgggcctcgggaaagtttgagctacttgatcgtattctg
cccaaattgagagcgactaaccaccgcgtgctgcttttctgccagatgacgtcactcatg
accatcatggaggattactttgcttttcggaacttcctttacctgcgcctcgatggcacc
accaagtctgaggatcgtgctgccttgctgaagaaattcaatgaacctgggtcccagtat
ttcattttcttgctgagcacacgagccgggggcctgggtttaaatcttcaggccgcggac
acggtggtcatctttgacagcgactggaatcctcatcaggacctgcaggcccaagaccga
gctcaccgcatcggtcaacagaacgaggtccgggtgctgaggctctgcaccgtcaacagt
gtcgaggaaaagattcttgcagctgcgaaatacaagctgaatgtggaccagaaggttatc
caggcgggcatgtttgatcagaagtcatccagccacgagcggagagcgttcctgcaggcc
atattggagcatgaagaggagaatgaggaagaagatgaagtaccagacgacgagaccctg
aaccagatgattgctcgccgggaagaagagtttgacctttttatgcgcatggacatggac
cggcggagggaggatgccagaaatccaaagcgcaagccccggctgatggaggaagatgag
ctaccctcctggattattaaggatgatgccgaagtggagaggctcacctgtgaagaagag
gaggagaagatatttggtaggggttcccgccagcgtcgggatgtggactacagcgacgcc
ctcaccgagaagcagtggctccgggccatcgaagacggcaatttggaagaaatggaagag
gaagtacggctgaagaagaggaaaagacgaagaaatgtggataaagaacctgtgaaggaa
gatgtggaaaaagcaaagaaaagaagaggccgccctccagctgagaaactgtcaccaaat
cccccaaaactaacaaagcagatgaacgccatcatcgatactgtgatcaactacaaagac
aggtgtaacgtggagaaggtgccctgtaattctcagttggaaatagaaggaaacagttca
gggcgacagctcagtgaagtcttcattcagttaccttccaggaaagagttaccagaatac
tatgaattaattaggaagccagtggatttcaaaaagatcaaggaaagaattcgtaatcat
aagtaccggagcctgggtgacctggagaaagatgtcatgcttctctgtcacaatgcacag
acattcaacttggagggatctcagatctatgaagactccattgtcctacagtcagtgttt
aagagtgctcggcagaaaattgccaaagaagaagagagtgaggaagagagcaatgaagag
gaggaggaagatgatgaagaggagtccgagtcagaggcaaaatctgtgaaggtgaagatc
aagctcaataaaaaagaagagaaaggccgggacactgggaaaggcaagaagaggccaaat
cgaggcaaagccaaacctgtagtgagcgattttgacagcgacgaggaacaggatgagaac
gagcagtcagaagcaagcgggactgatgacgagtga
DBGET
integrated database retrieval system
