Alexandromys fortis (reed vole): 126512652
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Entry
126512652 CDS
T08493
Name
(RefSeq) protocadherin-17 isoform X1
KO
K16499
protocadherin delta 2
Organism
mfot
Alexandromys fortis (reed vole)
Brite
KEGG Orthology (KO) [BR:
mfot00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
mfot04515
]
126512652
Cell adhesion molecules [BR:
mfot04515
]
Cadherins
Protocadherins
126512652
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Ortholog
Paralog
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Cadherin_CELSR2_9th
Cadherin_C_2
Cadherin_4
NUC153
PepSY
Motif
Other DBs
NCBI-GeneID:
126512652
NCBI-ProteinID:
XP_050016486
LinkDB
All DBs
Position
Unknown
AA seq
1159 aa
AA seq
DB search
MYLSICCCFLLWAPALTLKNLNYSVPEEQGAGTVIGNIGKDARLQPGLPPAERGSGGGRG
KSGSYRVLENSAPHLLDVDADSGLLYTKQRIDRESLCRHNAKCQLSLEVFANDKEICMIK
VEIQDINDNAPSFPSDQIEMDISENAAPGTRFPLTSAHDPDAGENGLRTYLLTRDDHGLF
ALDVKSRGDGTKFPELVIQKALDRELQNHHTLVLTALDGGEPPRSATVQINVKVIDSNDN
SPVFEAPSYLVELPENAPLGTVVIDLNATDADEGPNGEVLYSFSSYVPDRVRELFSIDPK
TGLIRVKGNLDYEENGMLEIDVQARDLGPNPIPAHCKVTVKLIDRNDNAPSIGFVSVRQG
ALSEAAPPGTVIALVRVTDRDSGKNGQLQCRVLGGGGTGVGGSLGGPGSVPFKLEENYDN
FYTVVTDRQLDRETQDEYNVTIVARDGGSPPLNSTKSFAVKILDENDNPPRFTKGLYVLQ
VHENNIPGEYLGSVLAQDPDLGQNGTVSYSILPSHIGDVSIYTYVSVNPTNGAIYALRSF
NYEQTKAFEFKVLAKDSGAPAHLESNATVRVTVLDVNDNAPVIVLPTLQNDTAELQVPRN
AGLGYLVSTVRALDSDFGESGRLTYEIVDGNDDHLFEIDPSSGEIRTLHPFWEDVTPVVE
LVVKVTDHGKPTLSAVAKLIIRSVSGSLPEGVPRVNGEQHHWDMSLPLIVTLSTISIILL
AAMITIAVKCKRENKEIRTYNCRIAEYSHPQLGGGKGKKKKINKNDIMLVQSEVEERNAM
NVMNVVSSPSLATSPMYFDYQTRLPLSSPRSEVMYLKPASNNLTVPQGHAGCHTSFTGQG
TNSSETPATRMSIIQTDNFPAEPNYMGSRQQFVQSSSTFKDPERASLRDSGHGDSDQADS
DQDTNKGSCCDMSVREALKMKTTSTKSQPLEQEPEECINCTDECRVLGHSDRCWMPQFPA
ANQAENADYRTNLFVPTVEANVETETYETVNPTGKKTFCTFGKDKREHTILIANVKPYLK
AKRALSPLLQEVPSASNSPTKACIEPCASTKGALDGCEAKPGALAEASSSYLPTDSQYLS
PSKQPRDPSFMASDQMARVFADVHSRASRDSSEMGAVLEQLDHSNRDLGRESVDAEEVVR
EIDKLLQDCRGNDPVAVRK
NT seq
3480 nt
NT seq
+upstream
nt +downstream
nt
atgtacctttccatctgttgctgctttctcctgtgggcccctgccctgacactcaaaaac
ctcaactactcagtgccagaagagcaaggggccggcacggtgataggcaacataggcaag
gatgcccgactgcaacccgggcttccgccggctgagcgcggtagcggcggcgggcgaggc
aagtcgggcagctaccgggtgctggagaactccgcaccgcacctgctggacgtggacgcc
gacagcgggctcctctacaccaagcagcgcatcgaccgtgagtccttgtgccgccacaat
gccaagtgccagctgtccctagaggtgttcgctaatgacaaggagatctgcatgatcaaa
gtagagatacaggacatcaacgacaatgctccctctttcccctcggaccagatcgaaatg
gacatctcagagaacgcggcaccaggcacccgctttccccttactagcgcacacgaccca
gacgctggcgagaacggtctccgcacctatctgctcacccgcgatgatcatggcctcttt
gcactggacgtcaagtcccgcggcgacggcaccaagttccctgagctggtcatccaaaaa
gctttggaccgcgagctgcagaaccaccacactctggtgctgactgccctggatggcgga
gagcctccgcgctccgccacggtgcagatcaatgtgaaggtgatcgattctaatgacaac
agtccagtcttcgaggctccgtcatacttggtggaactgcccgagaacgcacccctgggc
accgtggtcattgatctgaatgccaccgacgctgatgaaggtcccaacggagaagtgctg
tactccttcagcagctatgtgcccgaccgcgtgcgggagctcttctccattgatcccaaa
accggccttatccgcgttaagggcaacttggactatgaggagaatggcatgttggagatc
gacgtgcaggccagagacctaggtcctaacccgattccagcccactgcaaggtcacagtc
aagcttatcgaccgcaacgacaacgcgccgtccattggtttcgtctccgtgcggcagggg
gcgctgagcgaggccgccccgccaggcacagtcatcgccctggttcgggtcactgaccga
gactcaggcaagaatgggcagctgcagtgtagggtactaggtggaggagggactggcgtt
ggaggcagcttgggggggcccggttcggtccccttcaagcttgaagagaactatgacaac
ttctacactgtggttactgaccgtcagctggaccgcgagacacaggacgagtataacgtg
actatcgtggcccgggacgggggatcccctccactcaactccaccaagtctttcgctgtc
aagattctagatgagaacgacaacccgcctcgtttcaccaaagggttgtacgtcctccaa
gtacatgagaacaacattccaggagaatacctcgggtcagtgctcgcccaagatcccgac
ctgggccaaaatgggacagtgtcctactccattctgccctcgcacattggcgacgtgtca
atctacacctatgtgtccgtgaaccccactaatggggccatatatgccctgcgctccttt
aactatgaacaaacgaaggcttttgaattcaaggtactggctaaagactccggggcgcca
gcacacttggagagcaacgccacggtgagggtgacagtgttggatgtgaatgacaacgct
ccagtgattgtgctgcccactctacagaacgacacagctgagctgcaggtcccgcgaaat
gccggcctgggctacctagtgagcaccgtgcgcgccctggacagtgactttggagagagc
gggcgcctcacgtatgagattgtggatggcaatgacgaccacctgtttgagattgatcca
tccagcggcgagatccgcacgctgcaccccttctgggaggatgtgactcccgtggtggag
cttgtagtaaaggtgaccgatcatggcaagcccaccctgtccgcggtggccaaactcatc
attcgatcagtgagcggctctctgcctgaaggggtaccgcgagtgaatggggagcagcac
cactgggacatgtcgctgcctctcatagtgactctaagcacgatttcgatcatcctccta
gcggccatgatcaccatagctgtcaagtgcaaacgggaaaacaaggagattcgcacttac
aactgccgcatcgccgagtacagccacccacagctaggcggggggaagggcaagaagaag
aaaatcaacaaaaacgatatcatgctggtgcagagcgaggtggaggagaggaacgccatg
aacgtcatgaacgtggtgagcagtccctccctggccacctcccccatgtacttcgactac
caaacccgcctgcccctcagctcgccccggtcagaggtgatgtatcttaagccagcctcc
aacaacctgactgtcccacaggggcacgcaggctgccacaccagcttcaccggacaaggg
actaattcgagcgagacccctgccactcggatgtccataattcagacagacaattttccc
gcagagcccaattacatgggcagcaggcagcagtttgttcaaagtagctccacgtttaag
gacccagaaagagccagcctgagagacagtgggcacggggacagtgatcaggctgacagt
gaccaagacactaacaaaggctcctgctgtgacatgtctgttagggaggcactcaagatg
aaaactacttcaactaaaagtcaaccacttgagcaagaaccggaagagtgcattaattgc
acagatgaatgccgagtgcttggtcattctgataggtgttggatgccacagttccctgca
gccaatcaggctgaaaacgcagattaccgcacaaatctctttgtacccacagttgaagct
aatgttgagactgagacttatgaaactgtgaaccccactgggaaaaagactttttgtaca
tttggaaaagacaagcgagagcacactattctcattgccaatgtgaaaccttatttaaaa
gccaaacgtgccctgagccctctcctccaggaggtcccctcagcatctaacagcccgacc
aaggcatgcattgagccttgcgcctccacaaaaggcgccctggatggctgcgaagcaaaa
ccgggggctctagcggaagcaagcagttcctacctgcctactgacagtcagtatctgtcg
cccagtaagcaaccaagagacccttccttcatggcttctgaccagatggcaagagtcttt
gcggatgtgcattccagagccagcagggattccagcgagatgggagccgtgctggaacag
cttgatcactccaacagagatctgggcagagagtccgtggatgcagaagaagttgtgaga
gagattgacaagctcttgcaggactgccggggaaatgaccctgtcgctgtgagaaagtga
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