KEGG   Alexandromys fortis (reed vole): 126512740
Entry
126512740         CDS       T08493                                 
Name
(RefSeq) nuclear receptor ROR-beta isoform X1
  KO
K08533  RAR-related orphan receptor beta
Organism
mfot  Alexandromys fortis (reed vole)
Pathway
mfot04710  Circadian rhythm
Brite
KEGG Orthology (KO) [BR:mfot00001]
 09150 Organismal Systems
  09159 Environmental adaptation
   04710 Circadian rhythm
    126512740
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:mfot03000]
    126512740
  09183 Protein families: signaling and cellular processes
   03310 Nuclear receptors [BR:mfot03310]
    126512740
Transcription factors [BR:mfot03000]
 Eukaryotic type
  Zinc finger
   Cys4 thyroid hormone receptor-like
    126512740
Nuclear receptors [BR:mfot03310]
 1. Thyroid hormone like
  1F. RAR-related orphan receptor
   126512740
SSDB
Motif
Pfam: zf-C4 Hormone_recep
Other DBs
NCBI-GeneID: 126512740
NCBI-ProteinID: XP_050016627
LinkDB
Position
Unknown
AA seq 459 aa
MRAQIEVIPCKICGDKSSGIHYGVITCEGCKGFFRRSQQNNASYSCPRQRNCLIDRTNRN
RCQHCRLQKCLALGMSRDAVKFGRMSKKQRDSLYAEVQKHQQRLQEQRQQQSGEAEALAR
VYSSSISNGLSNLNTEPGGTYANGHVIDLPKSEGYYNIDSGQPSPDQSGLDMTGIKQIKQ
EPIYDLTSVPNLFTYSSFNNGQLAPGITMTEIDRIAQNIIKSHLETCQYTMEELHQLAWQ
THTYEEIKAYQSKSREALWQQCAIQITHAIQYVVEFAKRITGFMELCQNDQILLLKSGCL
EVVLVRMCRAFNPLNNTVLFEGKYGGMQMFKALGSDDLVNEAFDFAKNLCSLQLTEEEIA
LFSSAVLISPDRAWLIEPRKVQKLQEKIYFALQHVIQKNHLDDETLAKLIAKIPTITAVC
NLHGEKLQVFKQSHPDIVNTLFPPLYKELFNPDCTAVCK
NT seq 1380 nt   +upstreamnt  +downstreamnt
atgcgagcacaaattgaagtgataccatgcaaaatttgtggcgacaaatcctccgggatc
cactacggcgtcatcacgtgtgaaggctgcaagggattcttcaggaggagccagcagaac
aatgcctcttactcctgcccaaggcagagaaactgtttaattgacagaaccaacaggaac
cgctgccaacactgccgactgcagaagtgtcttgccctaggaatgtcgagagatgctgta
aagttcgggagaatgtccaagaagcagcgtgacagcctgtacgctgaggtgcagaagcac
cagcaacggctgcaggagcagcggcaacagcagagtggggaggcagaggcccttgccagg
gtgtacagcagcagcatcagtaacggtctcagcaacctgaacaccgagcccggcggcacc
tacgccaacgggcacgtcattgacttgccgaaatccgaaggatattacaacatagattct
ggtcagccatctcccgatcaatcaggactggacatgactggaatcaaacagataaagcaa
gaacctatctatgacctcacatccgtacccaacttgtttacctatagctctttcaacaat
gggcagttagctcctgggataacaatgactgagatcgatcgaattgcacagaacatcatc
aagtcccatctggagacatgccagtacacaatggaagagctgcatcagctggcgtggcag
acccacacctacgaggaaataaaggcgtatcaaagcaagtccagggaggctctgtggcaa
cagtgcgccatccagatcacccatgccatccagtacgtggtggagttcgcaaagcggata
acaggcttcatggagctgtgtcagaacgaccagattttactgctgaagtcaggttgcttg
gaagtggttttagtgagaatgtgccgtgccttcaatccattaaacaacactgttctgttt
gaaggaaaatatggaggaatgcaaatgttcaaagccttaggttctgatgacctggtgaac
gaagcgtttgactttgcgaagaatctgtgttccttgcagctgactgaggaggagatcgct
ttgttctcttctgcggttctgatatccccagaccgagcctggctgatagaaccaagaaag
gtccagaagcttcaggaaaaaatctattttgcacttcaacatgtgattcagaagaatcac
ctggatgacgagaccctggcaaagttaatagccaagataccaactatcacagcagtctgc
aacttgcatggggagaagctgcaggtatttaagcaatctcatccagacatagtgaataca
ctgtttcctccattgtacaaggagctctttaatcctgactgtaccgcggtctgcaaatga

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