Alexandromys fortis (reed vole): 126512798
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Entry
126512798 CDS
T08493
Name
(RefSeq) nyctalopin isoform X1
KO
K08129
nyctalopin
Organism
mfot
Alexandromys fortis (reed vole)
Brite
KEGG Orthology (KO) [BR:
mfot00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
mfot00535
]
126512798
Proteoglycans [BR:
mfot00535
]
Extracellular matrix (ECM) proteoglycans
Small leucine-rich proteoglycan (SLRP) family
class IV
126512798
BRITE hierarchy
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Motif
Pfam:
LRR_8
LRR_4
LRR_1
LRR_5
LRRNT
LRR_LRWD1
Motif
Other DBs
NCBI-GeneID:
126512798
NCBI-ProteinID:
XP_050016701
LinkDB
All DBs
Position
Unknown
AA seq
485 aa
AA seq
DB search
MNLRSSCPYFLSVGITAVFFGLPCTRATEACLQACPAACTCRSMERGCSVHCDRAGLLRV
PTEFPCEAVSIDLDRNGLRMLGERAFGTLPSLRRLSLRHNNLSFITPGAFKGLPRLAELR
LAHNGELRYLHARTFAALSRLRRLDLAACRLFSVPERLLAELPALRELTAFDNLFRRVPG
ALRGLANLTHAHFERSRIEAVASSSLRGLRHLRSLSLQANRVRAVHAGAFSDCGALEHLL
LNDNLLAALPAAAFLGLRRLRTLNLGGNELGRVARAWFSDLAELELLYLDRNSITFVEEG
AFQNLSGLLALHLNGNRLTMLSWTAFQQGFFLGHLFLFRNPWHCDCHLEWLRNWMEGSGR
VADVACASPGSVAGLDLSQVVFEHSSDGLCMDPEELNFTTSSPGPSPEPVATTVSRFSSL
LSKLLAPRAPVEEVANTTWELVNGSMYDSLPSLGVEVLGCKAMFLFVSCLLLTLAQSVVF
SLQRD
NT seq
1458 nt
NT seq
+upstream
nt +downstream
nt
atgaatttgagatcctcctgcccctacttcctgagtgttggcattacagcggttttcttc
ggcctgccctgcacccgggccaccgaggcctgtttgcaggcctgtcctgcggcctgcacg
tgccgcagcatggagcgtggctgctccgttcattgcgaccgtgctggtctcctgcgggtg
cccactgagtttccatgcgaggcggtctccatcgacctggaccggaatggcctgcgcatg
ctgggcgagcgggcctttggcacgctaccgtcattgcgccgcctgtcgctgcgccacaac
aacctgtccttcatcacgcctggcgccttcaagggtctacctcgcttggccgagctacgc
ctggcgcacaatggtgagctgcgctatctgcatgcccgaaccttcgcggcgctcagtcgc
ctgcgccgcctggacctggcggcctgccgcctgttcagcgtgcccgagcgtctcctggcc
gagctgcccgccctgcgagagctcacggccttcgacaatctgttccgtcgggtacccggc
gcgctccgcggcctggctaacctgacgcacgcgcacttcgagcgcagccgcatcgaggcc
gtggcctccagctcgttgcggggcttgaggcacctgcgctctctcagcctgcaggccaac
cgcgtgcgggctgtgcacgccggggcctttagcgactgcggagccctagagcacctgctg
ctcaatgacaacctgctggccgcgctgcctgccgctgccttcctaggcctgcgccgcctg
cgcacactcaatctgggtggcaacgagctgggccgagtggcgcgggcctggttctccgac
ctggcagagctcgagctgctttacctggaccgcaacagcatcacttttgtggaggaaggc
gccttccagaacctttcgggcctcctggccctgcatctcaatggcaaccgcctcaccatg
ctctcttggaccgctttccagcaaggcttctttctgggccacctcttcctcttccgcaac
ccttggcattgtgactgccatctggagtggctgcgcaattggatggagggctctgggcgt
gtggctgatgtggcatgtgcctccccaggttctgtggccggcctggacctcagccaggtg
gtctttgagcactcctctgatggcttgtgtatggaccccgaggagctgaacttcaccaca
tccagcccaggccccagtccagagccagtggccaccaccgtgagcaggttcagtagcctc
ctctccaagctgctggccccaagggcccctgtggaggaagtagccaacaccacctgggag
ctggtcaacggctcaatgtatgacagccttccctcccttggagtggaggtcttaggctgc
aaggccatgtttctgttcgtctcttgcctcttgctaaccctagcacagtctgtagtgttc
agcctacagagggattga
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