Alexandromys fortis (reed vole): 126513332
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Entry
126513332 CDS
T08493
Name
(RefSeq) E3 ubiquitin-protein ligase SHPRH
KO
K15710
E3 ubiquitin-protein ligase SHPRH [EC:5.6.2.-
2.3.2.27
]
Organism
mfot
Alexandromys fortis (reed vole)
Brite
KEGG Orthology (KO) [BR:
mfot00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
mfot04121
]
126513332
Enzymes [BR:
mfot01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
126513332
Ubiquitin system [BR:
mfot04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
126513332
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
SHPRH_helical-2nd
SHPRH_helical-1st
Linker_histone
Helicase_C
zf-RING_UBOX
zf-C3HC4_3
PHD
zf-C3HC4_2
zf-C3HC4
PEP-utilisers_N
LMBR1
zf-RING_2
Motif
Other DBs
NCBI-GeneID:
126513332
NCBI-ProteinID:
XP_050017614
LinkDB
All DBs
Position
Unknown
AA seq
1700 aa
AA seq
DB search
MSSRRKRAPPVKVDEERQQQLHWNMHEDLRNEPLTLTIEQPCSGADSSSDCILIDDDPPE
DVVHRDKKRRSEAVSTLESTEKEIPLSVKLNVIISPYHVDHSWKAFLGDFALQLLPEESL
VEHFSERSFALMSSESSNQFLIYVHSECKDAEKQESVCKESADVCSKGLRVESSFSSDML
QDLAWLQKKRGIKLYQRPEGSHTIKVGIYILEAGLTRLDFMSDASSRMKKFNQLMKRVME
KLYNFVIPDVLEEDEEDSESEPEGQDIDELYHFVKQTHQQETQSVQVDVQHPALIPVLRP
YQREAVNWMLRQEHFRSGPAGDNSLHFLWREIVTPDGLKLYYNPYTGCIIRDFPHAGPQL
LGGILADEMGLGKTVEVLALILTHTRQDVKQDGLTLPEGKVVNYFIPSHCPRGKVKSREI
QDTECEPKEKVHCPPTRVMILTAVKEMNGKKGVSILSIYKYVSSIYRYDVQRNRSLLKRM
LKCLIFEGLVKQIKGHGFSGTFTLGKNYKEEDIYDKTKKQVVGSPRKIQKELRKSVNKDT
DSEYLPSNTSDDDDDPYYYYCKPRKSRSKLKRKPVLLTKKEKRQPISPDSHGHSPALSDS
ANPDPDVSESIPASESKQNQEDKDRVGSPKPAADELAHSNTASPCETSDYRFECICGEFD
QIGWKPRVQCLNCHLWQHAKCVNYEEKNLKVKPFYCPHCLVAMEPVSTRATLIISPSSIC
HQWVDEINRHVRSSSLRVLVYQGVKKDGFLQPHFLAEQDIVIITYDVLRSELNYVDIPHS
NSEDGRRLRNQKRYMAIPSPLVAVEWWRICLDEAQMVECPTVKAAEMAQRLSGINRWCIS
GTPVQRGLEDLFGLVVFLGIEPYCVKHWWIRLLYRPYCKKNPQHLYSFIAKILWRSAKKD
VIDQIQIPPQTEEMHWLHFSPVERHFYHRQHEVCCQDAVVKLRKISDWALKLSSLDRRTV
TSILYPLLRLRQACCHPQAVRGEFLPLQKRFYYQFPSPVGFIMLQYADHLVLGNQLGKTF
SPSQRSLVACSSLCRDEASKSSPQSTLVCFIIGTSEYASAAELYREVLRSSEEHKGKLKT
DSLQRLHATHNLMELLAAKHPGIPPTLRDGRLEEEAKQLREHYMSKCNTEVAEAQQALQP
VQQSIRELQRKIHSNSPWWLNVIHRAVELSVDEELVQRVRNEISSNYKQQTDKLSMSEKF
RDCRGLQFLLTTQMEELSKFQKLVREAVKKLERPPSRDVIESATVCHLRPARLPLNCCVF
CKADELFTEYESKLFSNTVKGQTAIFEEMIEDEEGLVDDRAPTTTRGLWATSETERSMKA
ILSFARSHRFDVEYVDEGSVSMDLFEAWKKEYKLLHEYWMTLRNRVSAVDELAMATERLR
VRHPKEPKPNPPVHHIIEPHEVEQNRIKLINDKAVATSQLQKKLGQLLYLTNLEKSQDKT
SGGINPEPCPICARQLGKQWAVLTCGHCFCNECTSIIIEQYSVGSHRSSIKCAICRQTTS
HKDVSYVFTSEKANQEDDIPVKGSHSTKVEAVVRTLMKIQLRDPGAKALVFSTWQDVLDI
ISKALTDNNMEFTQINRIKTFQENLSAFKHDPQINILLLPLHTGSNGLTIIEATHVLLVE
PILNPAHELQAIGRVHRIGQTKPTIVHRFLIKATIEERMQTMLKTAERSHTSSSGKHSEA
SVLTVADLADLFTKETEELE
NT seq
5103 nt
NT seq
+upstream
nt +downstream
nt
atgagcagccgaaggaaacgcgctcccccagtgaaggtcgatgaggaaaggcagcagcag
ctgcactggaacatgcatgaagacctgaggaatgaacctctcaccttgaccattgagcag
ccctgctccggtgcagactcttcctctgattgcatcctcatagatgatgaccctcctgaa
gatgtagttcacagggataagaagaggcgttcagaggctgtgagcaccttagaatccact
gaaaaagagatccctttgtctgtgaagttgaatgttataatttctccctatcatgtcgat
cattcttggaaagcatttctgggagattttgctcttcagcttctccctgaagagagttta
gttgaacatttttctgaaaggagttttgcattgatgagttcagagtcaagcaatcagttc
ctgatctatgtccattcagaatgtaaagatgcagagaagcaagaaagtgtctgcaaagaa
tcggctgatgtttgcagcaagggtcttcgagtggaatcgtccttcagtagtgacatgtta
caggatttggcctggctgcagaagaaaagaggaataaaactttatcagagaccagaagga
agtcatacgattaaggttggaatttatatcttggaagcgggcctaacaagactagacttt
atgagtgatgcaagttcaagaatgaaaaagttcaatcagctcatgaagagagtgatggaa
aagttatataattttgttattccagatgtgctggaagaagatgaggaagattcagagagt
gagccagagggccaggacattgatgagctctatcactttgtgaagcaaacacaccagcaa
gaaacacagtcagtccaagtggatgtccagcatcctgcgttaatcccagtcctgaggccg
taccagagagaggcagtgaactggatgctacgacaagagcatttcagaagcggtcctgcc
ggtgataactccctgcacttcctatggcgagaaattgttacacctgatggtttgaagctc
tactataatccatatacgggctgcatcattcgtgatttcccacatgctggaccacagttg
cttggtggaatcttagcagatgagatgggtctcggaaagacagtggaggttctggctctg
attctgacacatactcggcaggatgtcaaacaagacggtctcactcttcccgagggaaaa
gtggtgaattatttcatcccatctcactgtcccagaggaaaagtaaaaagcagagaaatc
caggatacagaatgtgaaccaaaagaaaaagttcactgcccccctacacgtgtgatgatc
ctaacagctgtgaaagaaatgaatgggaaaaaaggagtctctattctttctatctataag
tatgtcagctccatatacagatatgatgttcagcggaaccggagtcttctgaagaggatg
ctgaaatgtttaatctttgaaggtcttgtgaaacagatcaaaggtcatggtttctctggg
acttttactctggggaagaattacaaagaagaagatatatatgataaaacaaaaaagcag
gtggtggggagtccaaggaaaattcagaaagagttaagaaaatcagtgaacaaggacaca
gattctgaatacctgccatcaaacacttctgatgatgatgatgatccttattattattac
tgtaagcccaggaaaagccgtagtaaattgaaaagaaaacctgttctgctcactaagaag
gaaaagaggcagcctatcagtccggattcccatggtcactctccagctcttagtgactca
gcaaatcctgatcctgatgtgtcggagagtatacctgcctctgagagcaagcaaaaccaa
gaagacaaagaccgggtggggtctccaaagcccgctgctgatgagttggcacattctaac
actgcgagtccctgtgagacctctgattaccgctttgagtgcatatgtggtgaatttgac
cagattggctggaagccgagagttcagtgtctgaactgccacctgtggcagcatgcaaag
tgtgtgaattacgaggagaagaatctgaaggtgaagcctttttactgcccccactgcctt
gttgcaatggagccagtgtcaacaagggcaactctgatcatctctccaagttccatttgc
caccagtgggtggatgaaatcaaccggcatgtcagatcatcgtctcttcgagttttggta
tatcaaggagtgaagaaagatggcttcttacagcctcattttttggcagaacaagatata
gttatcattacctatgatgtccttcgttcagaactaaactatgttgatatcccacatagc
aatagtgaggatgggcgtcgcctgaggaaccagaagcgctatatggccattcccagtccc
ctcgtagcggtggagtggtggagaatctgtcttgatgaagctcagatggttgaatgtcct
acagtaaaagctgcagaaatggcccagcgtttgagtgggattaatcggtggtgcatcagc
ggcactccagtacagagaggactggaagatctctttggtctggtggtctttcttgggatt
gaaccttactgtgtcaaacactggtggattcgacttctctatcgaccatactgcaagaag
aatcctcagcatctctacagttttattgccaagatattgtggaggtctgctaagaaagat
gtcattgaccaaatccagattccacctcagactgaggaaatgcactggctccacttttct
cccgtggagaggcatttctatcaccgccagcatgaggtgtgctgccaggatgccgtggta
aaactcaggaagatctccgactgggccctgaaattgagcagcttggacagaaggaccgtc
acctccatcctgtatcctctgcttcggctcaggcaggcctgctgccatccacaggctgtt
cgcggggagttcttgccactccagaagaggttttactatcagtttccttctcctgtgggg
tttattatgttgcaatatgctgaccatttggtactgggtaaccagttggggaagactttc
tccccctctcagcgttccttagttgcctgtagttctttgtgtagggatgaagcctccaag
tcttccccccagtccactttggtatgctttataataggaacaagcgagtatgcctcggca
gcagagctgtacagagaagtgctacgctcctccgaggagcacaaaggaaaactcaaaacc
gattctcttcaaagacttcatgccacacataacttaatggagctcttggcagccaagcac
ccagggatacctcccaccttaagagatggcagacttgaagaagaggccaagcagcttcga
gagcactatatgagcaagtgtaacacagaagttgctgaagcccagcaagctttgcagcct
gtgcagcagtccatccgggagctccagaggaagattcattctaattctccttggtggctg
aatgtgatccacagagcagtggaattatctgttgatgaggaacttgttcagcgggtgcga
aatgaaataagtagtaactacaagcaacaaactgacaagctctctatgtcggagaagttc
cgtgactgcagaggacttcagttcttactcacaacacaaatggaagagctcagtaagttc
cagaagctcgtgagagaggctgtgaagaagctggagcgacctccatcccgtgatgtgatt
gagtctgccacagtctgccacctgcgaccagctagactccctctcaactgctgcgtcttt
tgtaaagccgatgaattgttcacagagtatgaatcaaaactattttctaacacagtcaaa
ggccagacagcaatctttgaagaaatgatagaagatgaggaaggacttgtggatgataga
gcacctaccactacccggggcctgtgggcaacaagtgagacagagcgatctatgaaagca
atattgtcatttgcaagatcacataggttcgatgtcgaatatgtagatgaaggaagtgtt
tcaatggatcttttcgaggcatggaagaaggaatataagttacttcatgaatactggatg
accctgagaaatcgtgtgtcagctgttgatgaacttgcaatggctacagagcggctaagg
gttcgccatcccaaggaaccaaagccaaacccacctgtccatcacatcattgaaccacat
gaggttgaacagaaccgtataaaactgataaatgataaagcggttgccacatcacagctc
cagaaaaaacttggacagcttctttacctgacaaatttggagaagtctcaagacaaaaca
tcaggaggtattaatccagagccttgtccaatctgtgctcgacagctgggaaaacagtgg
gcagtgctgacctgtggacactgcttctgtaacgagtgcacatccattataattgaacag
tacagtgtgggctctcatcgaagctccatcaagtgtgctatctgccgccagaccacatca
cacaaagacgtctcctatgtcttcacctcagagaaagcaaaccaagaggatgatatccct
gtgaagggtagccattctaccaaagtggaagctgtggtcaggactctgatgaaaatacag
cttagagatccaggggccaaagcactcgttttctcaacgtggcaagatgtactagatatt
atttcaaaagcgctgactgacaacaacatggaatttactcaaatcaatcgcattaagaca
ttccaggagaacctttcagcatttaaacatgatcctcaaatcaatattttgctgctgccc
ctgcacacaggctctaatggattaactatcattgaagctactcatgtcctcttggtggag
cccatactgaaccctgcccatgagcttcaggccattgggagggtgcaccgaattggacag
acaaaacctaccattgtacatagattcctaattaaagcaacaatagaagagcgaatgcag
acaatgctgaaaactgcagagaggagtcatacaagctcatccgggaagcactctgaagcc
tctgtgttgactgtggctgatctggcagacctctttaccaaagaaacagaggagcttgaa
tga
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integrated database retrieval system
