KEGG   Alexandromys fortis (reed vole): 126513519
Entry
126513519         CDS       T08493                                 
Name
(RefSeq) replication factor C subunit 3
  KO
K10756  replication factor C subunit 3/5
Organism
mfot  Alexandromys fortis (reed vole)
Pathway
mfot03030  DNA replication
mfot03410  Base excision repair
mfot03420  Nucleotide excision repair
mfot03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:mfot00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    126513519
   03410 Base excision repair
    126513519
   03420 Nucleotide excision repair
    126513519
   03430 Mismatch repair
    126513519
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:mfot03032]
    126513519
   03036 Chromosome and associated proteins [BR:mfot03036]
    126513519
   03400 DNA repair and recombination proteins [BR:mfot03400]
    126513519
DNA replication proteins [BR:mfot03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   RFC (replication factor C)
    126513519
  DNA Replication Termination Factors
   ELG1-RFC complex
    126513519
Chromosome and associated proteins [BR:mfot03036]
 Eukaryotic type
  Sister chromatid cohesion proteins
   CTF18-RFC complex
    126513519
DNA repair and recombination proteins [BR:mfot03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    RFC (replication factor C)
     126513519
  Check point factors
   HRAD17(Rad24)-RFC complex
    126513519
SSDB
Motif
Pfam: RFC_C RCF1-5-like_lid DNA_pol3_delta2 AAA Rad17 AAA_22 AAA_16 ABC_tran AAA_2 DUF2247 MyTH4 Sigma54_activ_2 AAA_11 ATPgrasp_ST zf-HC2
Other DBs
NCBI-GeneID: 126513519
NCBI-ProteinID: XP_050017921
LinkDB
Position
Unknown
AA seq 356 aa
MSLWVDKYRPCSLARLDYHKEQAAQLRNLVQCGDFPHLLVYGPSGAGKKTRIMCILRELY
GVGVEKLRIEHQSITTPSKKKIEISTIASNYHLEVNPSDAGNSDRVVIQEMLKTVAQSQQ
LETSSQRDFKVVLLTEVDKLTKDAQHALRRTMEKYMSTCRLILCCNSTSKVIPPIRSRCL
AIRVPAPSIDDICSVLSSVCKKEGLALPSKLAHRLAEKSCRNLRKALLMCEACRVQQYPF
TEDQEIPETDWEVYLRETANAIVSQQTPQRLLEVRGRLYELLTHCIPPEMIMKGLLSELL
HNCDGQLKGEVAQMAAYYEHRLQLGSKAIYHLEAFVAKFMALYKKFMEDGLEGMVF
NT seq 1071 nt   +upstreamnt  +downstreamnt
atgagcctctgggtggacaaataccggccgtgctccctcgcccggctggactatcacaag
gaacaggcggcgcagctgcgcaacctggtgcagtgtggtgactttcctcacctcctagta
tatgggccatcaggcgctggaaaaaagacaagaattatgtgtatcctacgagaactttat
ggtgttggggtagaaaaattgagaattgaacatcaatctatcacaactccatctaaaaaa
aaaattgaaatcagcaccattgccagtaactaccaccttgaagttaatcccagtgatgcg
ggaaacagtgatcgggttgtaattcaggagatgctgaagacagtggctcagtcacagcag
cttgaaaccagctcacaaagagacttcaaagtggtattattgacagaggtggacaaactc
acaaaggatgctcaacatgccttgcgcagaaccatggagaagtacatgtccacctgcagg
ctgatcttgtgttgcaattccacatctaaggtgatccccccgatccgcagtaggtgcctg
gcaattcgtgtgcctgctcccagcattgatgacatttgcagtgtattatccagtgtctgc
aagaaggagggtctagctcttccttcaaagctggctcacaggctggcagagaagtcctgc
aggaacctcaggaaagccttactgatgtgtgaagcttgcagagtgcagcaataccctttt
actgaagaccaagaaatccccgagacagactgggaagtgtatctgagggagactgcaaat
gctatcgtcagtcagcagactccacagaggctccttgaagtccgagggaggctctatgag
cttctcactcactgtattcctcctgagatgataatgaagggcctgctctcagagctctta
cacaactgcgatgggcagctgaaaggggaggtggcacagatggccgcctattatgagcat
cgactgcagctgggcagcaaagccatttatcacttggaggcgtttgtggccaagtttatg
gccctttataagaagttcatggaggacggactggaaggcatggttttctga

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