Alexandromys fortis (reed vole): 126513964
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Entry
126513964 CDS
T08493
Name
(RefSeq) nuclear pore complex protein Nup88
KO
K14318
nuclear pore complex protein Nup88
Organism
mfot
Alexandromys fortis (reed vole)
Pathway
mfot03013
Nucleocytoplasmic transport
mfot05014
Amyotrophic lateral sclerosis
Brite
KEGG Orthology (KO) [BR:
mfot00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
126513964
09160 Human Diseases
09164 Neurodegenerative disease
05014 Amyotrophic lateral sclerosis
126513964
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mfot03019
]
126513964
Messenger RNA biogenesis [BR:
mfot03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
126513964
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Nup88
DUF7344
DUF659
FliJ
Motif
Other DBs
NCBI-GeneID:
126513964
NCBI-ProteinID:
XP_050018554
LinkDB
All DBs
Position
Unknown
AA seq
743 aa
AA seq
DB search
MAAAEASVGDGELWQSWLPNHVVFLRLREGLKNQSPAEAEKPAASTSPSCPPLPPHLLTR
NLVFGLGGELFLWDAEGSAFLVVRLRGPSGGAVEPPLSQYQRLLCINPPLFEIHQVLLSP
TQHHVALIGTKGLMALELPQRWGKDSEFEGGKATVNCSTTPIAERFFTSSTSLTLKHAAW
YPSEMLDPHVVLLTSDNVIRIYSLREPQTPTKVIILSEAEEESLILNKGRAYTASLGETA
VAFDFGPLATVSKNIFGQKGKEEIVAYPLYILYENGETFLNYVSLLHNPGNIGKLLGPLP
MHPAAEDNYGYDACAVLCLPCVPNILVIATESGMLYHCVVLEGEEEDDQTSEKSWDPRVD
LIPSLYVFECVELELALKLASSEDDPFATDFSCPIKLHRDPKCPSRYHCTHEAGVHSVGL
TWIHKLHKFLGSDEEDKDSLQELAAEQKCFVEHILCTKPLPCRQPAPIRGFWIVPDILGP
TMICITSTYECLIRPLLSTVHPASPPLLCTREDAEVAESPLRILAETPDSFEKHIKSILQ
RSAANPAFLKSSEKDLAPPPEECLQLISRATQVFREQYILKQDLAKEEIQRRVKLLCDQK
RKQLEDLNYCREERKSLREMAERLADKYEEAKEKQEDIMNRMKKVLHSFHTQLPVLSDSE
RDMKKELQLIPDQLRHLGNAIKQVTMKKDYQQRKMEKVLSPQRPTITLSAYQRKCIQSIL
KEEGEHIREMVKQINDIRNHVNF
NT seq
2232 nt
NT seq
+upstream
nt +downstream
nt
atggcggcggccgaggcgtctgtgggtgatggggagctatggcagagctggcttcccaac
cacgtcgtgttcctgcggctccgcgagggcctgaaaaaccagagtccggccgaagcggag
aaaccagcggcttcgacttcgccctcgtgcccgcctctgccgccgcatttgctgacgaga
aacttggtcttcggcctgggaggggagctcttcctgtgggacgccgaaggcagcgccttc
ttggtggttcgccttcgaggcccgagcggtggcgccgtggagcctcctctctcccagtac
cagagattactttgcataaatccacccctgtttgaaattcatcaagtcttgttaagtcca
acacaacatcatgtagcactcataggaacaaaaggactcatggcattagaattacctcag
agatggggaaaggattcagaattcgaaggtgggaaagcaactgtgaattgtagtaccaca
ccaattgctgagcgatttttcaccagctctacctctctgactctgaaacatgctgcatgg
tatccaagtgagatgctggatccccacgtagtgctgttgacatcagacaatgtgataaga
atttactctctccgtgagcctcaaacacctactaaggtgattatactttcagaagcagaa
gaggaaagcttaatactcaataaaggacgggcatatacagcatctctaggagagactgca
gttgcatttgactttgggccactggcaacagtgtcgaagaatatatttggacaaaaaggc
aaagaagaaatagtagcatatccactgtacatcttatacgagaatggggagaccttcctt
aactatgtcagtttgttacacaaccctgggaatattgggaagctgttgggaccattgcct
atgcatcctgcagctgaagataactacggttacgatgcctgtgctgtactctgtttgccc
tgtgttcccaatatcttagtaattgcgactgaatcaggaatgctgtatcactgtgttgta
ctagaaggggaagaagaagacgatcaaacgtcagaaaagtcctgggatcccagggttgac
ctcatcccttctctgtatgtgtttgagtgtgttgaattagagcttgccttgaaactggca
tcttcagaggatgatccctttgctactgacttttcctgtccaattaaactgcacagagat
cccaagtgtccttcgagataccactgtacccacgaagctggtgtgcacagtgttgggctg
acttggattcataaacttcacaagtttctaggatcagatgaagaagataaggatagtttg
caggaacttgctgcagaacagaaatgctttgtagaacacattctctgtacaaagccattg
ccatgtaggcagccagctccaattcgaggattctggatcgtcccagacatcctgggaccc
acaatgatctgcatcaccagtacctatgaatgtctcataaggcctttattaagtacagtc
cacccagcatctcctcccctgctgtgtacccgagaagatgctgaagtggcagagtctccc
ctgcgcatcctggctgaaaccccagactcctttgagaagcatattaaaagcatcttgcaa
cgtagtgctgccaaccccgcatttctcaaatcatctgaaaaggatttggctccccctccc
gaggagtgtcttcagcttatcagcagagccacccaagtgttccgagaacagtacattctc
aagcaagacctggccaaggaagaaattcagcggagggtcaaattattatgtgaccaaaag
aggaaacaactagaagatctcaactactgtcgagaggagaggaagagtctgcgggaaatg
gcagagcgcttagctgacaagtatgaggaagccaaagaaaaacaagaagatatcatgaac
aggatgaagaaagtgctccacagttttcatactcagctcccggttctctctgacagtgag
agagacatgaagaaggagttacagctgatacctgaccaactacgacatctaggcaatgcc
atcaaacaggttactatgaaaaaagactatcaacagcggaagatggaaaaagtgctgagt
cctcagagacccaccattactctcagtgcctaccagcggaagtgcattcagtccatcctg
aaggaagagggtgaacacatcagggaaatggtgaagcaaatcaatgatatccgaaatcat
gtcaacttctaa
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