Alexandromys fortis (reed vole): 126514197
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Entry
126514197 CDS
T08493
Name
(RefSeq) nucleoprotein TPR
KO
K09291
nucleoprotein TPR
Organism
mfot
Alexandromys fortis (reed vole)
Pathway
mfot03013
Nucleocytoplasmic transport
mfot05014
Amyotrophic lateral sclerosis
mfot05200
Pathways in cancer
mfot05216
Thyroid cancer
Brite
KEGG Orthology (KO) [BR:
mfot00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
126514197
09160 Human Diseases
09161 Cancer: overview
05200 Pathways in cancer
126514197
09162 Cancer: specific types
05216 Thyroid cancer
126514197
09164 Neurodegenerative disease
05014 Amyotrophic lateral sclerosis
126514197
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mfot03019
]
126514197
Messenger RNA biogenesis [BR:
mfot03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
126514197
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_MLP1_2
Imm70
Motif
Other DBs
NCBI-GeneID:
126514197
NCBI-ProteinID:
XP_050018883
LinkDB
All DBs
Position
Unknown
AA seq
2413 aa
AA seq
DB search
MASRGFDGSRRGSLRRAGAREAASEAGDGGAQAPGFRASPCSFVSPSAPAADMAAVLQQV
LERSELNKLPKSTQNKLEKFLADQQSEIDGLKGRHERFKVESEQQYFEIEKRLSQSQERL
VNETRECQNLRLELEKLNNQVKVLTEKNKELETAQDRNLGIQSQFTRTKEELEAEKRDLI
RTNERLSQEVEYLTEDVKRLSEKLKESNTTKGELQLKLDELQASDVAVKYREKRLEQEKE
LLLNQNSWLNTELKTKTDELLALGREKGNEILELKCNLENKKEEVLRLEEQMNGLKTSNE
HLQKHVEDLLTKLKEAKEQQASMEEKFHNELNAHIKLSNLYKSAADDSEAKSTELTRAVD
ELHKLLKEAGEANKTIQEHLLQAEESKDQMEKEMLEKIGKLEKELENANDLLSATKRKGA
ILSEEELAAMSPTAAAVAKIVKPGMKLTELYNAYVETQDQLLLEKLENKRINKYLDEIVK
EVEAKAPILKRQREEYERAQKAVASLSAKLEQAMKEIQRLQEETDKANKHSSVLERDNQR
MEVQIKDLSQQIRVLLMELEEARGNHVIRDEEVSSADISSSSEVISQHLVSYRNIEELQQ
QNQRLLFALRELGETREREEQETTSSKIAELQHKLESSLTELEQLRESRQHQMQLVDSIV
RQRDMYRILLSQTTGMAIPLQASSLDDISLLSTPKRSSTAPTVSTPAPVPVIESTDAIEA
RAALKQLQEIFENYKKEKIDSEKFQNEQLEKLQEQVTDLRSQNTKISTQLDFASKRYEML
QDNVEGYRREITSLQERNQKLTATTQKQEQIINTMTQDLRGANEKLAVAEVRAENLKKEK
EMLKLSEVRLSQQRESLLAEQRGQNLLLTNLQTIQGILERSETETKQRLSTQIEKLEHEI
SHLKKKLENEVEQRHTLTRNLDVQLLDTKRQLDTEINLHLNTKELLKNAQKENATLKQHL
SNMEVQLASQSSQRTGKGQPSDKDDVDDLMSQLRQAEEQVNDLKERLKTSASNVEQYRAM
VTSLEDSLNKEKQVTEEVHKNIEVRLKESAEFQNQLEKKLMEVEKEKQELQDDKRKAIES
MEQQLSELKKTLSSVQNEVQEALQRASTALSNEQQARRDCQEQAKIAVEAQNKYERELML
HAADVEALQAAKEQVSKMASVRQHLEETAQKAESQLLACKASWEERERVVKDEVSKSVSR
CEDLEKQNRLLHDQIEKLSNKVVASMKEVVQTPLNVSLNEEGKSQEQILEILRFIRREKE
IAETKFEVAQVESLRYRQRVELLERELQELQDSLNAEREKVQVTAKTMAQHEELMKKTET
MNVVMETNKMLREEKERLEQNLQQMQAKVRKLELDILPLQEANAELSEKSGMLQAEKKLL
EEDVKRWKARNQHLVNQQKDPDTEEYRKLLSEKEIHTKRIQQLNEEVGRLKAEIARSNAS
LTNNQNLIQSLKEDLNKVRSEKENIQKDLDAKIIDIQEKVKTITQVKKIGRRYKTQYEEL
KAQQDKAMETSTQSSGDHQEQHISIQEMQELKDNLCQSETKTKSLEGQVENLQKTLSEKE
TEARNLQEQTVQLQSELSRLRQDLQDRTTQEEQLRQQITEKDEKTRKAIVAAKSKIAHLA
GVKDQLTKENEELKQRNGALDQQKDELDVRMTALKSQYEGRISRLERELREHQERHLEQR
DEPQEPTNKPPEQQRQITLKTTPASGERGIASTSDPPTANIKPTPVVSTPSKVTAAAMAG
NKSTPRASIRPMVTPATVTNPTTTPTATVMPTTQVESQEAMQSEGPVEHVPVFGSASGSV
RSTSPNVQPSISQPILTVQQQTQATAFVQPTQQSHPQIEPANQELSPNIVEVVQSSPVER
PSTSTAVFGTVSATPSSSLPKRTREEEEDSTVEAADQVSDDTVEMPLPKKLKTVTPVGTE
EEVIAEESTDGEVEAQVYNQDSQDSIGEGVTQGDYTPMEDSEETSQSLQIDLGPLQSDQQ
TTSSQDGQGKGDDVIVIDSDDEEDDEENDGEHEDYEEDEDDEDDDEDDTGMGDEGEDSNE
GTGSADGNDGYEADDAEGGDGTDPGTETEESMGGAESNQRAADSQNSGEGSTSAAESSFS
QEAAREQQPTSASERQTPRAPQSPRRPPHPLPPRLTIHAPPQELGPPVQRIQMTRRQSVG
RGLQLTPGIGGMQQHFFDDEDRTVPSTPTLVVPHRTDGFAEAIHSPQVAGVPRFRFGPPE
DMPQTSSSHSDLGQLASQGGLGMYETPLFLAHEEESGGRSVPTTPLQVAAPVTVFTESTT
SDASEHASQSVPMVTTSTGTLSTTNETATGDDGDEVFVEAESEGISSEAGLEIDSQQEEE
PVQASDESDLPSTSQDPPSSSSVDTSSSQPKPFRRVRLQTTLRQGVRGRQFNRQRGVSHA
VGGRGGINRGNMN
NT seq
7242 nt
NT seq
+upstream
nt +downstream
nt
atggcatcccggggttttgacgggtcccgccgcgggagtctccggagggcaggcgcgagg
gaggcggcgagcgaggctggagacggcggggctcaggctccgggctttcgcgcttcgcct
tgctccttcgtttctccttcggcccctgctgccgacatggcggcggtgctgcagcaagtg
ctggagcgctcggagctgaacaagctgcctaagtcgacccagaacaaacttgagaagttc
ctggctgatcagcagtccgagatcgacggcctgaaggggcggcatgagagatttaaggtg
gagagcgaacaacagtactttgagatagagaagaggttgtcccagagtcaggagaggctt
gtgaatgaaacccgtgagtgtcagaacttgcgactggagcttgagaagttaaataaccaa
gtaaaagtattaactgagaaaaacaaagaacttgaaactgctcaagatcgtaatctaggc
attcagagccagtttacaagaacaaaggaagaattagaagctgaaaaaagagacctaatc
agaaccaatgagagactatctcaggaagttgagtatttaacagaggacgttaaacgttta
agtgaaaagcttaaggaaagcaatacaacaaagggtgaacttcagttaaagttggatgaa
cttcaagcttctgatgtggctgtgaagtatcgagaaaaacgcttagaacaagaaaaggag
ttgctactcaaccagaattcatggctcaatacagagttgaaaaccaaaactgatgagcta
ttggctttaggaagagaaaaaggaaatgaaattctggaacttaaatgtaatcttgaaaac
aagaaagaagaggttttgagactggaagaacagatgaatggcttaaaaacatcaaatgaa
catcttcaaaaacatgtggaggatttgttgacaaaattaaaagaggccaaagaacagcag
gccagtatggaggagaaattccacaatgaattaaatgctcacataaagctctctaatctg
tacaagagtgctgccgatgactcagaggcaaagagcactgagctgactcgggccgtggat
gagctgcacaaacttctgaaagaagccggagaagccaacaaaacaatacaagagcatctt
ctacaagctgaagaatctaaagatcaaatggaaaaagaaatgcttgagaaaatagggaaa
ttggaaaaggagttagagaatgcaaatgacctgctttctgccaccaaacgtaaaggggct
atattgtctgaagaagagctggcagccatgtctcccactgcagcagctgtagctaaaatt
gtaaaacctggtatgaaattaactgagttatacaatgcttatgtggaaactcaggatcag
ttgcttttggagaaactagaaaataaaagaatcaataagtacctagatgagatagtaaaa
gaagtggaagccaaagcaccgattttgaaacgccagcgtgaagagtatgagcgtgcgcaa
aaagctgtggcaagtttatctgcaaagcttgaacaagctatgaaggagatccagcgattg
caggaggaaactgataaagccaacaaacattcatcagtacttgaaagggacaatcagaga
atggaagtgcaaatcaaagatctttcacaacagattagagttctcttgatggaacttgaa
gaagcacggggcaatcacgtaattcgtgacgaggaagtcagctctgcagacataagtagt
tcatctgaagtaatatcgcagcatttagtatcttataggaatatcgaagagcttcagcag
cagaaccagcgtctgttatttgctcttcgagaacttggggaaacacgggaaagagaagaa
caagagacaacttcctctaaaattgctgagcttcaacacaaacttgagagctctctcact
gaactggaacagctccgtgagtcacgacagcatcaaatgcagcttgttgattccatagtt
cgtcagcgtgacatgtatcgaattttattgtcacagacaacaggaatggccattccatta
caagcttcaagtttagatgatatttctcttctatcaactccaaaacgttcgagtacagca
ccgactgtttctactccagctccagtacctgtcattgaatccacagatgccatagaagcc
agggctgccctgaaacagttgcaggaaatctttgagaactataaaaaagaaaaaatagac
agtgaaaaatttcagaatgagcagctagaaaaacttcaggagcaagtcacagacctgcgc
tcccaaaacaccaaaatctctactcagctagattttgcttctaaacgttatgaaatgctg
caagataatgttgaaggatatcgccgagaaataacatctctgcaggagagaaatcagaaa
ctcactgcaacaactcagaagcaggaacagatcatcaacacaatgacacaagacttgaga
ggagccaatgagaagcttgctgttgcagaagtaagagcagaaaatttgaagaaggaaaag
gaaatgcttaaattgtcagaagtccgtctgtctcagcaaagagagtctttattagcagaa
cagagaggacagaacttattgctgactaatctacaaacaatccagggaatactagagcga
tctgagacagagaccaaacaaaggctgagtacccagatagaaaaactggagcacgagatc
tcccacctgaagaagaagttggagaatgaggtggaacaaagacatacacttaccaggaat
ctcgatgttcaactgttagatacgaagagacagctagatacagagataaatcttcacctg
aacacaaaagaactgttaaaaaatgctcaaaaggaaaatgctacactgaaacagcacctt
agcaatatggaagtccagcttgcttctcagtcctcacagagaactggtaaaggtcagccg
agtgacaaagatgatgtcgatgatcttatgagtcagctaaggcaggctgaagagcaggtc
aatgacttgaaggagagactcaagaccagtgctagcaatgtggaacagtatcgggcaatg
gtgactagtctggaggattctctcaacaaggagaagcaggtgactgaggaagtacataaa
aacattgaagttcgtttaaaagaatcagcagagtttcagaatcagttggagaaaaagttg
atggaagtagagaaggagaagcaagagcttcaggatgacaaaagaaaagccatcgaaagc
atggagcagcaattatctgaattgaagaagacactgtctagtgttcagaatgaagtacaa
gaagctctgcaaagggcaagcacggctttaagtaatgaacagcaagccaggcgtgactgc
caggaacaagctaaaatagccgtggaagcgcagaataagtatgagagggaattgatgcta
catgctgctgatgttgaagctctgcaagctgccaaggaacaagtttcaaaaatggcatca
gtccgtcagcatttggaagaaacagctcagaaagcagaatcacagctgttggcatgtaaa
gcatcttgggaagaacgagagagagtggtgaaggatgaagtttccaagagtgtgtctcgc
tgtgaagatctagagaaacaaaacagactacttcatgatcaaatcgaaaaattaagtaat
aaggtggttgcctctatgaaggaggttgtgcaaacaccattgaatgtctctctcaatgaa
gaaggaaaatctcaagaacagattttagaaattcttaggtttatacggcgggaaaaagaa
attgctgaaactaagtttgaggtggctcaggttgagagtctgcgctatcgacaaagagtt
gaacttttagaacgggagttgcaagaacttcaggatagcttgaatgcagaaagggagaag
gtgcaggtaactgcaaaaacaatggctcaacatgaagaattgatgaagaaaactgaaaca
atgaatgtagtcatggagaccaataagatgctaagagaagaaaaggaaaggcttgaacag
aacctgcaacaaatgcaagcgaaggtgaggaaactggagttagatattttgcctttacaa
gaagccaatgctgagctaagtgagaaaagcggtatgctgcaggcagagaagaagctccta
gaagaggatgtcaagcgttggaaggctcggaaccagcatctggtaaatcagcagaaagat
ccagatacagaagaatatcgaaagcttctttctgaaaaggaaattcatactaagagaatt
cagcagctaaatgaagaagttggaagacttaaggctgaaattgcaagatcaaatgcatcg
ttgactaacaaccaaaacttaatccagagtctgaaggaagatttaaacaaagtacgaagt
gaaaaggaaaatattcagaaagatttagatgccaaaataattgatatacaggaaaaagtc
aaaacaatcactcaagtcaagaaaattggacgcaggtacaagactcagtatgaagaactt
aaagcacagcaggacaaggccatggagacttccactcagtcctctggagaccatcaggag
cagcacatctccatccaggaaatgcaggagctcaaagataacctctgccaatccgaaaca
aagacaaagtcactcgagggtcaagtagagaatctgcagaagacattatctgaaaaagaa
acagaagcaagaaatctccaggaacaaacagtgcaacttcaatctgaactgtcgcgcctt
cgtcaggaccttcaggatagaactacacaggaggagcagctccgacagcaaataactgaa
aaggatgaaaagacaaggaaggcaattgtagcagcaaaatcaaaaattgcacacttagct
ggtgtaaaagatcagttaactaaagaaaatgaagagcttaaacaaaggaatggagcttta
gatcaacagaaggatgaactggatgtccgaatgactgctcttaagtcccagtatgaaggt
cggattagtcgcttagaaagagagctcagagagcatcaagagagacaccttgagcagaga
gatgaacctcaggaacccactaataagcctccagaacagcagagacagatcacactgaaa
actactccagcttccggtgaaagaggaattgccagcacatcagacccaccaacagccaat
atcaagccaactcctgttgtttctactccaagtaaagtgacagcagcagcaatggctggg
aataagtcaacacccagggcaagtatccgcccaatggttacacctgcaactgtcacaaac
ccaactactaccccaaccgcaaccgtaatgcccaccacacaggtggaatcacaggaagct
atgcagtcagaagggccagtggaacatgttccagtatttggaagtgcaagtggatctgtt
cgttctactagtcctaatgttcagccctccatttctcagcccatcctaactgtacagcag
caaacacaggctacagcttttgtgcaacccactcaacagagtcaccctcagattgagcct
gcaaatcaagagttgtcgccaaacatagttgaggtggtacaaagttcaccagttgagcgg
ccgtctacttccacagctgtatttggcactgtttcagcgaccccaagttcctccttgcca
aaacgcactcgggaggaggaggaggacagcaccgtagaagcggcagaccaggtctctgat
gacacagtggaaatgcctctcccaaagaagctgaagacagtcacgcccgtgggaactgag
gaagaagttattgcagaagagagtactgacggagaggtagaagctcaagtttataatcag
gattctcaagattccattggagaaggagtcacccaaggagattatacacctatggaagac
agtgaagaaacgtcacaatctctacaaatcgatcttggaccacttcagtcagatcagcaa
actacttcttcccaggatggtcaaggcaaaggagatgatgtaattgtaattgacagtgat
gatgaagaagatgatgaagaaaatgatggagaacatgaagattatgaagaagatgaggat
gatgaggatgatgatgaagatgacacggggatgggagatgagggtgaagatagtaatgaa
ggaactggtagtgcagatggtaatgatggatatgaagctgatgatgctgagggtggtgat
gggactgacccaggtacagaaacagaagagagtatgggcggagccgaaagcaatcagaga
gctgctgactctcaaaacagcggtgagggaagcacaagcgcagcagagtcctctttctct
caggaggctgctcgggagcagcagcccacgtcggcatcggagaggcagaccccgcgagca
ccccagtcaccaagacgcccaccacatcctcttcccccacgcctgaccattcatgctcca
cctcaggagttggggccaccagttcagagaattcagatgacccggaggcagtctgtaggt
cgtggacttcaactgactccaggaataggtggtatgcaacaacacttttttgatgatgaa
gacagaacagttccgagtaccccgactcttgtggtgccgcatcgcactgatggctttgct
gaagccattcattccccacaggttgccggtgttcctagattccggtttgggccacctgaa
gacatgccacagacaagttccagtcactctgatcttggccagcttgcttctcaaggaggt
ttgggaatgtatgaaacacccctctttctggctcatgaggaagagtctggtggccgcagt
gttcccactacacctctccaagtagcagccccagtgactgtgtttactgagagtaccacg
tctgatgcttcagagcatgcttctcagtctgttccgatggtgacaacatccacgggcact
ttatccacgaccaacgaaacagccactggtgacgatggagacgaagtgtttgtggaggca
gagtctgaaggtattagttcagaggcaggcctagaaattgatagccaacaggaagaggag
cctgtgcaggcatctgatgagtccgatctcccctcaaccagccaggaccctccgtccagc
tcttctgtggacactagcagcagtcagccgaagcctttcagaagagtaagacttcagaca
acattgagacaaggcgttcgtggtcgtcagtttaacagacagagaggtgtaagccatgca
gtgggaggaagaggaggaataaatagagggaatatgaactaa
DBGET
integrated database retrieval system