KEGG   Alexandromys fortis (reed vole): 126514547
Entry
126514547         CDS       T08493                                 
Name
(RefSeq) THUMP domain-containing protein 2 isoform X1
  KO
K28400  U6 snRNA (guanine-N(2))-methyltransferase THUMPD2 [EC:2.1.1.-]
Organism
mfot  Alexandromys fortis (reed vole)
Brite
KEGG Orthology (KO) [BR:mfot00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:mfot03041]
    126514547
Spliceosome [BR:mfot03041]
 Other splicing related proteins
  Proteins involved in snRNP biogenesis
   Other proteins involved in snRNP biogenesis
    126514547
SSDB
Motif
Pfam: UPF0020 Methyltransf_25 Methyltransf_31 Methyltransf_11 Ubie_methyltran MTS Methyltransf_12 CMAS AviRa Methyltransf_15 RlmL_1st Methyltransf_4 Methyltransf_8 N6_Mtase
Other DBs
NCBI-GeneID: 126514547
NCBI-ProteinID: XP_050019478
LinkDB
Position
Unknown
AA seq 543 aa
MAAAGAEMGSDPAGGARFFCTAGRGLEPFLMREVQARLEATQVEYISGKVFFTTRSDLTS
MKKLKSAERLFLLIRKQLPIAVPSLSKGKILTELQRLINEDPGSWLKAISLWRKLLERDK
KEEKVSQRDVNTLKRKVGGNEIVLAKKLKLEEKQMVEQSRGEGQGDGLPEDSLEQGDAIT
KTDQLQEHGLQDDMVKAQNQDLTFRVSCRCSGNIGKAFPPQEAGRVVGIALMRKFGWKAN
LRNPHLEIFMHLSDAYSVLGIPLFRVPLASRTYIQTAGLRSTIAWAMASIAEIKAGALVL
DPMCGLGTILVEAAKEWPDVYYMGADVSDSQLLGACDNVKAAGLADKIDLVKVSVTELPL
PSQSVDVIISDIPFGKKFKLGKDIKSILQEMERVLCDGGAMVLLLSEDHHRYLRDCGGNG
IPLTSQDNITDPEMNPDKRTGASGTASPSRKTSSSQCPSRVLPCGSLVPVECFKVSLGKT
DAFICKYKKVRASGLSPAGYHEPEAHQQMAALQESPHLQDSSEPQSPSAQPLQRVQLRNS
LVE
NT seq 1632 nt   +upstreamnt  +downstreamnt
atggcggccgccggggccgaaatgggttcagaccccgccggcggcgcccggttcttctgc
acggcgggccgcggcctggagccgttcttgatgcgggaggtgcaggcacggctggaggct
acgcaggttgaatacatttcaggaaaagtgtttttcaccacccgttcagatttgacctca
atgaagaagttgaagtcagcggaaagactgtttttgttgattaggaagcagcttccaatt
gcagttccgtctctgagcaaaggaaaaatacttactgagctccagagacttataaatgag
gatccaggaagttggctgaaggccatttcgctttggagaaaacttcttgaacgtgataaa
aaagaagaaaaagtttctcaaagggatgttaatacactaaagcgaaaagtgggaggaaat
gagattgtccttgccaagaaattaaaactagaggagaagcagatggttgaacagagccga
ggggaaggccagggcgacgggcttcccgaagactcgctggagcaaggggatgctatcact
aaaactgaccagcttcaagagcatggactccaggatgacatggtgaaggctcagaaccag
gacttgaccttcagggtttcctgtcgctgcagcgggaatatcggaaaggccttccctcca
caggaggcaggaagagtggttggaattgctctcatgaggaagtttggatggaaagccaat
ttaaggaatccacatttagagattttcatgcatctgagtgacgcttactcagtgctgggg
attcctctgttcagagttcccttagccagcagaacttacatccagacagctgggctgcgg
tcaactatagcatgggccatggcatctattgctgaaattaaggctggagctctggttctg
gatccaatgtgtggccttgggaccatacttgtggaagctgctaaagagtggccagatgtg
tattacatgggtgctgatgtcagtgactcgcagttacttggtgcatgtgacaatgtgaag
gctgcaggccttgcggacaagattgacttagttaaagtctctgtcacagagttaccactg
ccgtcacaaagtgttgatgtgattatttctgacattccatttgggaaaaaattcaagtta
ggaaaagacatcaaaagcattctacaagaaatggaaagagtgctgtgtgatggtggagcc
atggtcttgctgctcagtgaggatcaccacaggtaccttagagactgtggaggcaacggc
attcctctaacatcccaagacaacatcactgaccctgagatgaaccctgacaaaagaact
ggcgcatcaggcacagcatctccttcacgtaaaactagtagctcccagtgcccgagcaga
gtgttgccctgtggctccctggtgccagtggagtgcttcaaagttagccttggaaaaaca
gatgcattcatatgtaaatataagaaggtgcgtgcttctggactgtcaccagctggatac
catgagccggaagcacatcagcagatggcagcccttcaggaatccccccatcttcaggat
tcctcagagccccagagcccgagtgcacagcctctgcagagggtgcagctaaggaacagc
cttgttgagtaa

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