Alexandromys fortis (reed vole): 126514636
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Entry
126514636 CDS
T08493
Name
(RefSeq) RB1-inducible coiled-coil protein 1
KO
K17589
RB1-inducible coiled-coil protein 1
Organism
mfot
Alexandromys fortis (reed vole)
Pathway
mfot04140
Autophagy - animal
mfot04211
Longevity regulating pathway
mfot05010
Alzheimer disease
mfot05014
Amyotrophic lateral sclerosis
mfot05016
Huntington disease
mfot05017
Spinocerebellar ataxia
mfot05022
Pathways of neurodegeneration - multiple diseases
Brite
KEGG Orthology (KO) [BR:
mfot00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
126514636
09150 Organismal Systems
09149 Aging
04211 Longevity regulating pathway
126514636
09160 Human Diseases
09164 Neurodegenerative disease
05010 Alzheimer disease
126514636
05014 Amyotrophic lateral sclerosis
126514636
05016 Huntington disease
126514636
05017 Spinocerebellar ataxia
126514636
05022 Pathways of neurodegeneration - multiple diseases
126514636
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
mfot01009
]
126514636
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
mfot04131
]
126514636
03029 Mitochondrial biogenesis [BR:
mfot03029
]
126514636
Protein phosphatases and associated proteins [BR:
mfot01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
126514636
Membrane trafficking [BR:
mfot04131
]
Autophagy
Autophagosome formation proteins
ULK complex
126514636
Mitochondrial biogenesis [BR:
mfot03029
]
Mitochondrial quality control factors
Mitophagy factors
Parkin-independent mechanism factors
126514636
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ATG11
ATG17_like
TBK1_ULD
ZMYND8_CC
ubiquitin
Motif
Other DBs
NCBI-GeneID:
126514636
NCBI-ProteinID:
XP_050019598
LinkDB
All DBs
Position
Unknown
AA seq
1587 aa
AA seq
DB search
MKLYVFLVNTGTTLTFDTELTVQTVADLKHAIQSKYKIAIQHQVLVVNGGECMATDRRVC
TYSAGTDTNPIFLFNKEMILCDRAPAIPKTTFSTENDMEIKVEESLMMPAVFHTVASRTQ
LAVEMYEVAKKLCSFCEGLVHDEHLQHQGWAAIMANLEDCSNSYQKLLIKFESIYSDYLQ
SIEDIKLKLTHLGTAVSVMAKIPLLECLTRHSYRECLGRLDSLNEHEDSEKTEMKRSTEL
VLSPDMPRTTNTSMLTSFHKSVEHVPPDPTDAERGKGLRESCQSTVQQEEASVDEKDSDL
PFFNVSLLDWINVQDRPNDVESLVRKCFDSMSRLDPKIIQPFILECHQTIAKLDNQNMKA
IKGLEDRLYALDQMIASCGRLVNEQKELAQGFLANQMRAENLKDASVLPDLCLSHANQLM
IMLQNHRKLLDIKQKCTTAKQELANNLHVRLKWCCFVMLHADQDGEKLQALLRLVIELLE
RVRIVEALSTVPQMYCLAVVEVVRRKMFIKHYREWAGALVKDGKQLYEAEKSKRESFGKL
FRKSFLRNRLFKGLDSWPPSFCTQKPRKFDCELPDISLKDLQFLQSFCPSEVQPFLRVPL
LCDFEPLHQHVLALHNLVKAAQSLDEMSQTITDLLNEQKVSASQASPQSAASPRIESTTT
TSPKTPPPLTVQDPLYPAVCPLEELSPDSIDAHTFDFETISHPNAEQTIHQASLDLDSLA
ESPESDFMSAVNEFVIEENLSSPNPISDPQSPEMMVESLYSSVINAIDSRRLQDTSAHGK
EGLGERAALHVQLEKCKVAAQDSHIGIQTIKEDLCHLRTFVQKEQCDLSNSLKCIAIEIR
NIIEKVKCSLEITLKEKHQKELQSLKSEYECKLDALVKDSEENANKIKKLKGDLISLEEV
LQSKDSEFALIKHEKDAVVFLQREKDQKLVEMENIMRTQNCEIEELKQSREMALEDLKKL
HVENDKKIESLRAEFQCLEQSHLKELEDTMHVRHTHEFEKVMTDYKVSLERLKKENQQRI
DQILESHASTLQEKEQQLQELKLKVSDLTDMRCKLEVELALKEAETDEIKILLEESRTQQ
KETLKTLLEQETENLRTEISKLNQKIHENNENYQVGLAELRALMTIEKDQCISELISRHE
EESNILKAELDSVTSLHHQAFEIEKNLKEQIVELQSKLNSELSALERQKDEKLSRQEEKY
EALIQNLEKDKEKLVMSHEHDKEQLIQRLNYEKDEAIQTALNEFKLERELVEKALLEKVK
HLENQIAKSSALESAREDSSSLVAELQEKLQEEKAKFLEQLEEQEKRKNEEMQNVRTSLI
AEQQTNFNTVLTREKMRKENIINDLSDKLKSTMQQQERDKDLIESLSEDRARLLEEKKKL
EEEVSKLRTSSFLPSASAAAAPELYGACAPELPGETERAATEIADGGRVDSAMETSMMSV
QENTLSEEKQRIMLLERTLQLKEEENKRLNQRLMSQSMSSVSSRHSEKIAIRDFQVGDLV
LIILDERHDNYVLFTVSPTLYFLHSESLPALDLKPGEGASGASRRPWVLGKVMEKEYCQA
KKAQNRFKVPLGTKFYRVKAVSWNKKV
NT seq
4764 nt
NT seq
+upstream
nt +downstream
nt
atgaagttatatgtgtttctggttaacactgggaccactctaacatttgacactgagcta
actgtgcaaactgtggctgaccttaagcatgccattcaaagcaaatacaagattgctatt
cagcaccaggtgctagtggtcaatggaggagaatgcatggctacagatcgaagagtgtgt
acctacagtgctggaacggacacaaatccaatttttctctttaacaaagaaatgatctta
tgtgaccgcgcacctgctattcctaaaactaccttttcaacagagaatgacatggaaata
aaagttgaggagtctcttatgatgcctgcagttttccacactgttgcttcaaggacacaa
cttgcagtggaaatgtatgaagttgccaagaagctttgctctttctgtgaaggtcttgtc
catgatgaacatctacagcaccaaggctgggctgcaatcatggccaatctggaggactgt
tcaaattcataccaaaagcttcttatcaaatttgaaagtatttattcagattatctgcag
tccatagaagacatcaagttaaaacttactcatttaggaaccgcggtttcagtaatggcc
aagattcctctcttggagtgcctaaccagacatagttacagggaatgtttgggaagactg
gattctttaaatgaacatgaagactcagagaaaactgagatgaaaagatccactgaactg
gtgctctctcctgatatgcctagaacaactaatacatccatgttaacctcatttcacaag
tcagtggaacatgtacctccagatcccaccgatgctgaacggggcaaaggacttagggaa
tcttgtcaaagtactgtccagcaagaagaagcttcagtagatgagaaagacagtgatctt
cctttttttaatgtgtccttattagactggataaatgttcaagatagacctaatgacgtg
gaatctttggtcaggaagtgctttgattctatgagcaggcttgacccaaagattattcaa
ccatttatattagaatgccatcaaactattgccaaacttgataatcagaatatgaaagcc
attaaaggacttgaagatcgtctgtatgccctggaccagatgattgctagctgtggccga
ctggtaaatgaacagaaagagcttgctcagggatttttagctaatcagatgagagctgaa
aacttgaaggatgcatctgtgttgcctgatctgtgcctgagtcatgcaaatcagctgatg
attatgttgcaaaaccacagaaaattgttggatattaaacagaagtgtaccactgccaaa
caagagctagcaaacaacctacatgtcagactgaagtggtgttgttttgtgatgcttcat
gctgatcaagatggagaaaagctacaagcactgctgcgccttgtcatagagctgttagag
agagtcagaattgtcgaggctctcagcacagtccctcagatgtactgcctagctgtggtc
gaggtcgtgcggagaaaaatgttcattaaacactacagagagtgggccggtgctttagtc
aaagatgggaaacaattgtatgaagctgaaaagtccaaaagggaatcctttgggaaatta
tttaggaagtcctttttaagaaatcgtctatttaagggactggactcctggcccccatca
ttttgtactcagaagcctcgaaaatttgactgtgaacttccagacatatcattaaaagat
ttacagtttctccaatcattttgtccttcagaagtgcagccattcctcagggttccctta
ctttgtgactttgaacctctacaccagcatgtacttgccctacataatttggtaaaagca
gcacaaagtttggatgaaatgtcacagaccattacagatctgctgaatgaacaaaaggtg
tctgcaagtcaagcatccccacagtcagctgcttctccaaggatagaaagtacaacaact
acctcaccaaaaactcctcctccactaactgttcaggatcccttatatccagcagtgtgt
cccttagaagaattgtctccagatagcattgatgctcatacatttgactttgaaaccatc
tcccatccaaatgcagaacaaacaattcaccaagcttcgttagacttggattctttagca
gaaagtcctgagtctgatttcatgtctgctgtgaatgagtttgtgattgaggaaaactta
tcatctccaaaccctataagtgatccacaaagtcctgaaatgatggtggagtcactttat
tcatcagtcatcaatgccatagatagtaggcgcttgcaggacacgagtgcacatggaaaa
gaggggttgggagagcgtgctgctctgcatgtccagctggagaaatgcaaagttgctgcc
caagactctcacatcggtatacaaaccatcaaggaagatctgtgccatctcagaacattc
gtacaaaaagaacagtgtgatttatcaaattctttaaaatgtatagcaatagaaataaga
aatattattgaaaaagtcaaatgctccctagaaataacactaaaggaaaaacatcagaaa
gaactccagtctttaaaaagtgagtatgaatgtaaacttgatgctctagtaaaagacagt
gaagaaaatgcaaataaaattaaaaaattgaaaggagatttaatatcccttgaggaagtt
ttacaaagtaaagacagtgaatttgcattgattaaacatgaaaaggatgctgtcgtcttc
ttgcagcgtgaaaaggaccagaagttggtagagatggaaaatattatgcgtactcaaaat
tgtgaaattgaagaattaaagcagtcacgagagatggcgttagaagacctgaaaaagcta
catgttgaaaatgataagaaaatagagtcactgagagctgaatttcagtgcttagagcaa
agccacctaaaggaattagaggacacaatgcatgtcagacacacacatgagtttgagaaa
gttatgacagactacaaagtgtcgttggagagattgaaaaaggaaaatcaacaaagaatt
gaccagatactagaatctcatgcctcaactctccaggaaaaagaacaacagttgcaggaa
ttgaaactcaaggtttctgatttgacagacatgaggtgtaaattggaggttgaacttgca
ttaaaagaagcagaaaccgatgagataaagatcttattggaagagagcagaacacagcaa
aaggaaactttgaagactctccttgagcaagagacagaaaacttgaggacagaaataagt
aaactaaaccaaaagattcatgaaaataatgagaattatcaggtgggcttagcagagtta
agagctttaatgacaattgaaaaagatcagtgcatttccgaattaattagtagacacgaa
gaagaatctaatatacttaaggctgaattagacagtgtaacatcattgcatcatcaagca
tttgaaatagaaaaaaacttgaaagaacaaatagttgaactgcagagtaaattgaactca
gaattgagtgcacttgaaagacaaaaagatgaaaaactaagccgacaagaagagaagtat
gaggctctcatccagaacctagaaaaagacaaggaaaagttggtcatgagccatgaacac
gacaaagaacagttaattcagaggcttaattacgaaaaagacgaagctattcaaactgca
ctaaatgaatttaagttggagagagaacttgttgagaaagcgttattagaaaaagttaaa
catctagagaatcaaatagccaaaagttctgctcttgaatcagccagagaagattcttca
agcttagttgctgaacttcaagagaagcttcaggaagaaaaagctaagtttctagaacag
cttgaagaacaagaaaaaagaaagaatgaagaaatgcagaatgtccgaacatctttgatt
gctgaacaacagaccaattttaacactgttttaacaagagagaaaatgaggaaagaaaac
ataataaatgatctcagtgataaattaaaaagtacaatgcagcaacaagagcgtgataaa
gatttgatagagtccctttctgaagaccgagctcgtttgcttgaagagaagaagaagctt
gaagaggaagtgagcaaattgcgcaccagcagtttccttccctcggcctctgcagctgca
gccccagagctctacggggcctgtgcacctgagctgcctggggaaacagagagagcagcc
acagagatagctgatggaggaagggtggactcagcgatggagaccagcatgatgtctgtc
caagaaaacacgctatccgaagagaagcagaggatcatgcttctagagcggacgttgcag
ctgaaagaagaagaaaacaagcggttaaatcagaggctgatgtctcagagcatgtcctca
gtgtcttcaaggcattctgaaaaaatagccattcgagattttcaggtgggagatttggtt
ctcatcatcctagatgaacggcatgacaattatgtgttgtttactgttagtcctactttg
tattttctgcattcagagtctcttcctgccctggacctcaaaccaggtgagggagcttca
ggtgcatctcgacgaccctgggtccttggaaaagtaatggaaaaggaatattgtcaagcc
aaaaaggcacaaaacagatttaaagttcctttggggacaaagttttacagggtgaaagct
gtgtcatggaataagaaagtatag
DBGET
integrated database retrieval system
