Alexandromys fortis (reed vole): 126514967
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Entry
126514967 CDS
T08493
Name
(RefSeq) ATP-binding cassette sub-family A member 6-like isoform X1
KO
K05649
ATP-binding cassette, subfamily A (ABC1), member 6
Organism
mfot
Alexandromys fortis (reed vole)
Pathway
mfot02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
mfot00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
126514967
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
mfot02000
]
126514967
Transporters [BR:
mfot02000
]
ABC transporters, eukaryotic type
ABCA (ABC1) subfamily
ABCA5, 6, 8, 9, 10 subgroups
126514967
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ABC_tran
ABC2_membrane_3
AAA_21
R1_ABCA1
RsgA_GTPase
AAA_29
nSTAND1
AAA_22
AAA_16
AAA_23
Motif
Other DBs
NCBI-GeneID:
126514967
NCBI-ProteinID:
XP_050020210
LinkDB
All DBs
Position
Unknown
AA seq
1621 aa
AA seq
DB search
MSVRQQTCVLLHKNLLKKWRGRRESFLEWSIPIIIGLYMGQFSFFKENMQLPEIPPQDLG
SLDEFNGSSIMVFYTPVSNITQQIMNKTTFSPSMKGTRIIGLPSKKYLDDMLLKNIPHAL
GIIFNDTFSYKLKVFLSYGYPFLKEDILAHCWDKRGDVSCSLSRYWERGFVPLQTAINAA
IIEITTNRSVMEKLMSVNAISMKTLPFITKDTFQYEFFIVFCLLYFSSFVYFISRNVTNE
RKKSKELMKMMGLQDSAFWLSWGLIYVGFIFITSIFIAVIITSAQIIVMTGFPVIFTLFF
LYGLSLIAVAFLMAVLFQKAILTNLIVFLFTLLWGCVGFTVLNKQLPTSLEWILSICSPF
AFTSGMAKIIFLEYDLNGVVFPDPSGESYAILVTFSILAFDGLFYLVLALYFDKILLYGE
ERRYSPLFCLNLSSCFRQKTGSHQVIERGVDPELPSDDYFEPVAPEYQGKEAIRIRNIKK
VYKGKSGKVEALKGLFFDIYESQITAILGHSGAGKSSLLNILNGLYVPTSGLVTVYNKNL
SEMQDLKEIRKITGVCPQHNVQFGALTVKENLTLFAKIKGILPQRVKQEVQQIMLELDMQ
SIQDNLAEHLSEGQKRKLTFGIATLGDPRILLLDEPTVGLDPFSRQRVWSFLKERRANRV
ILFSTQFMDEADILADRKVIMSNGSLKCIGSSVFLKRKWGLGYHLSLFMDETCDSEQITS
IINHHIPDAKLKAKTHEKLEYILPLGRTSKFPDFFSDLDKYSGQGLMNYEVSMSTLNEVF
MNLEGESTTNLNFEKRETVRDSDSLSEMEPAYSSLSEVRKTVSALSLWRMQVCAIARLRI
LKLKRERKAFLTFLLILGIALLPLIMEKTANAIIEQKSDWEFKTELYFLSPGQLPQGLRT
SLLVINNTGSNIEDFIQSLKHQNIVLEVDDFANRNGTESLSYNGAIIVSGRQKDYRFSVV
CNTKRLHCFPILMNVISNGILHMSNHTQHIRTEESVISSDLVMLWFGILQSFLFLLFVVC
SISPHIAMSSVGDYKKKADSQLWISGLYPSAYWCGQAVVDINLFNVILLLSYFTLYMTQL
VHISSTSRILLSIIALSFGCAASLVFLTYVISFVFGKRRKNSGLWSICFFTIFTIMFDIL
LTDLFSEKLLIAFMILVPSFSFSAFLIVLEMRDYQYYNEFGELKYGLSGVDLLSCLIPYF
HTLLFIFVLRCLELKCGKNVMWKDPIFRISPKNPKVQPNPEEHRGEDEDEDVQAERIRTS
AALSTSNLHERPVIIANGLHKEYAGQKRSCFSKRTKKVAARNISFCVNKGEILGLLGPNG
AGKSSSIRMIAGITKPAAGEVELKGFSSPVGYQGDGTVKFGYCPQENVLWPVLTVKEHLE
VYATVQGLRKEDAAIAISRLVNAFNLHGQLNVLVRKLAAGATRKLCFVLSILVNSPVLIL
DEPSTGLDVPGKQQIRQAVRAAAKDNEAGILVTTHDLAEAEALCDRVAIMVSGRLRCIGS
IQHLKRKFGKDYILELKVNETSQVASVHGEILKLFPQAARQESYLSLLTYKLPITDVYPL
SQAFYKLEAVKRSFNLEEYSLSQCTLDKVFVELSKEQELENVHEETDTAVRWKLLPHLDE
P
NT seq
4866 nt
NT seq
+upstream
nt +downstream
nt
atgagcgtgcgtcagcagacctgcgtccttctgcacaagaacctgctcaagaaatggaga
gggagaagggagagcttcttggaatggagcatcccaattattataggactgtatatgggg
cagttttcatttttcaaagaaaatatgcaactccctgaaatcccacctcaggatcttgga
agtttagatgaatttaatggatcttctatcatggttttttatacaccagtctctaacata
acccaacagataatgaataaaacaaccttttctccctctatgaaaggaacgagaatcatt
gggttgccaagtaagaaatacttggatgatatgcttctgaagaatattccccatgctctt
ggaatcatatttaatgacaccttctcttacaagttaaaagtattcctgtcctatggatat
ccatttttgaaagaagatatattagctcattgctgggataagcgaggcgatgtttcctgt
tcattgtccagatactgggagagaggatttgtgcctctacaaactgccatcaatgccgct
atcatagaaatcacaacaaatcgttctgtgatggagaagttgatgtccgttaatgccata
agcatgaagacgttacctttcattactaaagatacttttcaatatgagttttttattgta
ttctgcttgctttatttctcctcatttgtatattttatatcacgcaatgttaccaatgag
aggaaaaagtctaaggaactgatgaaaatgatgggtctacaagactcggcattctggctg
tcctggggcttaatctatgttggcttcatcttcattacttccatattcattgcagttatc
ataacatctgcccaaattatagtgatgactggtttccctgtcatatttacactctttttc
ttatatggattatctttgatagctgtagccttcctgatggctgttttgtttcagaaagct
atcctcaccaatctgattgtatttctctttaccctcctctgggggtgtgtggggttcact
gtacttaacaaacaactccccacttctctggaatggattctgagcatttgcagccccttt
gccttcacctctgggatggctaagatcattttcctggagtatgacttgaatggtgtagta
tttcctgacccttcaggagaatcatatgcaatcctagtgacattttccatattggctttt
gatgggcttttctacttggttctggcattgtattttgacaaaatcttgctctatggggaa
gagcgccggtattctccactgttttgcttgaatttgtcatcttgtttccgacaaaagacc
ggtagccaccaggtcattgagagaggcgtagaccccgagctcccttccgatgattatttt
gagcctgtggctcctgaataccaaggaaaagaagccatcagaataagaaatattaaaaaa
gtatataaagggaagtctggaaaagtggaggctttgaaaggcttgttctttgatatatat
gaaagtcaaatcacagcaattctgggccacagtggagcaggaaaatcttcattactaaat
attcttaatggattatatgttccgacatcaggattagtcacagtctataataaaaatctc
tctgaaatgcaagacttgaaggaaatcagaaagataactggtgtttgtcctcagcataat
gttcaattcggtgcactcactgtgaaggaaaacctcaccctctttgctaaaataaaaggg
attcttccccagcgtgtaaaacaagaggtacaacaaattatgctggaactggacatgcag
agtattcaggataaccttgccgaacatttaagtgaaggacagaaaagaaagctcaccttt
gggattgccacgttgggagacccccgaattttgctcttagatgaacctacggttggactc
gatcccttctcaaggcagcgagtgtggagtttcctgaaggaacgcagggcaaatcgtgtg
attctcttcagcactcagttcatggacgaggcagacatcctggctgacagaaaagtgatc
atgtccaatgggagtctaaaatgcataggttcttctgtgtttctgaagagaaaatggggt
cttggatatcacttaagtttgtttatggatgaaacatgtgattcagagcaaataacatcc
atcatcaatcatcacatccctgacgctaaattaaaagcaaaaacccacgaaaagcttgag
tacatcttgccgctgggaaggacgagcaagtttccagacttcttcagtgatctcgataaa
tattctggccagggcttgatgaattacgaagtttccatgtcaactctgaatgaagtcttc
atgaacctggaaggagaatcaaccactaacctaaactttgagaaaagagaaacagtgaga
gactcggacagcttaagtgaaatggagccagcttattcttctctttctgaagtgcggaag
accgtgagtgccttgagcctctggaggatgcaggtctgtgcaatagcgcggcttcgcatc
ctaaagctaaagcgagagagaaaagcatttttgacctttctgttgattcttggaattgca
ctgctccctttgattatggaaaagacggctaatgctataatagagcaaaaaagcgactgg
gaatttaaaacagaattgtatttcctgtcccctggacaacttcctcagggtctgcgaacc
agcctattggtcatcaacaacacaggatcaaatatcgaagattttatacagtcactgaag
catcaaaacatagttttggaagtggatgactttgcaaacagaaatggcaccgagagcctc
tcatacaatggagctattatagtttctggaagacaaaaggactacaggttttcagttgtg
tgtaacaccaagagactccactgctttcctatcctaatgaatgtcatcagcaacgggatc
cttcatatgtccaatcatacgcagcatattagaactgaggaatctgtaatctcatcagac
cttgtgatgctctggtttgggatactgcaaagtttcctgttcttattgttcgttgtgtgc
agcatttcgccacacatcgccatgagcagtgtcggtgattacaaaaagaaagctgattcg
cagctgtggatttctggcctctacccttctgcctactggtgtgggcaggcagtggtggat
attaacctcttcaatgtaattcttctcttgagctacttcacactgtacatgacacaactg
gttcacatttcctcgactagtagaattttgctgtctataattgctctttcattcggttgt
gcagcctctctcgtcttcctgacgtatgtgatatcatttgtttttggcaaaaggagaaaa
aacagtggcctctggtcaatttgcttctttactatcttcaccatcatgtttgacatcctt
ttgactgatttattcagtgaaaaattgcttattgccttcatgatattagttccttcattt
tcattttctgcattccttattgttttggaaatgagagactatcagtactacaatgaattt
ggagaactcaaatatggtttgtctggggtcgatcttctatcatgcctaataccttacttt
cacactttgctgttcatttttgttctgagatgcctggaacttaaatgtggaaagaatgta
atgtggaaggatcccattttcaggatatctccaaaaaatccaaaggttcaaccgaatcca
gaagaacacagaggtgaagatgaagatgaagatgtccaagcagaaagaataaggacatca
gctgccttgagtacttcaaatttacatgagaggccagtcataatcgccaatggtctgcac
aaagagtatgcaggtcagaagagaagttgcttctcaaagaggacaaagaaagtagcagcc
agaaacatctctttctgtgttaataaaggtgaaatcttgggattgttaggacccaatggc
gctggtaaaagttcctctattaggatgatagctgggatcacaaagccagcagctggagag
gtggaactgaaaggatttagttcacctgtgggttaccagggtgatggcacagtcaagttt
ggatactgtcctcaggagaacgtgctgtggcccgtcctgaccgtgaaggagcacctggag
gtgtatgctactgtgcaagggctgaggaaggaggatgctgctattgccatttcaagatta
gtgaacgcctttaacctacatggccagctgaatgttttagtgcggaaactagctgcagga
gccactagaaagctgtgctttgtgctgagcatcctggtaaattcacctgtcctgattctg
gatgaaccatctacaggcttagatgtgccagggaagcagcaaatacggcaggcagtcagg
gcagctgctaaagacaatgaggcgggcatcctcgtgactacccatgacctggctgaggct
gaggctctgtgtgaccgagtggccatcatggtgtctggaaggctgagatgcattggttca
atccaacacctgaaaaggaagtttggcaaggactacattctagaactaaaagtgaacgaa
acttctcaagtggcatcggtgcacggggagattctgaagctcttcccacaggccgcacgt
caggaaagctatctctccttgttgacctacaagttacccataacggatgtttatcctctg
tctcaggccttttacaaattagaagcagtgaagcgcagctttaacctggaagaatacagc
ctctctcagtgcacgctggacaaagtgtttgtagaactttcgaaggaacaggagctggaa
aatgttcacgaagaaactgatacagccgtgagatggaaactgctccctcacttggatgaa
ccgtga
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integrated database retrieval system
