Alexandromys fortis (reed vole): 126515201
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Entry
126515201 CDS
T08493
Name
(RefSeq) class E basic helix-loop-helix protein 41 isoform X1
KO
K03730
class B basic helix-loop-helix protein 3
Organism
mfot
Alexandromys fortis (reed vole)
Pathway
mfot04710
Circadian rhythm
Brite
KEGG Orthology (KO) [BR:
mfot00001
]
09150 Organismal Systems
09159 Environmental adaptation
04710 Circadian rhythm
126515201
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
mfot03000
]
126515201
Transcription factors [BR:
mfot03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Hairy, Hairy/E(SPL)
126515201
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Hairy_orange
HLH
bHLH_NPAS4
DCX2_DCDC1
Motif
Other DBs
NCBI-GeneID:
126515201
NCBI-ProteinID:
XP_050020640
LinkDB
All DBs
Position
Unknown
AA seq
519 aa
AA seq
DB search
MVRSARELGAGLAGDARALWPNTARSESKLPAQCVCVRAGVRARVCERVSERARGGGAAN
CFTLSTLHRRGRARQPGDAHIPPRSPQANVPQITGQNPPNRNGGNGQPLNMDEGIPHLQE
RQLLEHRDFIGLDYASLYMCKPKRSLKRDDTKDTYKLPHRLIEKKRRDRINECIAQLKDL
LPEHLKLTTLGHLEKAVVLELTLKHLKALTALTEQQHQKIIALQNGERSLKSPVQADLDA
FHSGFQTCAKEVLQYLARFESWTPREPRCAQLVSHLHAVATQLLTPQVPQGRVPGRAPCS
TGAAAAPGLDRAARCVPVIQRTQPGTEPEHDTDTDSGYGGEVEQGRAAVKQEPPGDPSPA
PKRPKLEARSALLGPEPALLGSLVALGGGAPFAQPAAAPFCLPFYLLSPSAAAYVQPWLD
KSGLDKYLYPAAAAPFPLLYPGIPAAAAAAAAAFPCLSSVLSPPPEKAGSAAGAPLLAHE
VAPPGPLRPQHAHSRTHLPRAGNPECSQEDASLPAKDAP
NT seq
1560 nt
NT seq
+upstream
nt +downstream
nt
atggtacgttccgcacgtgagctgggtgctggtctggccggcgacgcgcgtgccctgtgg
ccaaacactgcccggagtgagagcaaactaccagcgcagtgcgtgtgtgtgcgcgcgggg
gtgcgcgcgcgggtgtgcgagagggtgagcgagcgagcacggggcggaggggcggccaac
tgcttcacactttcaacactgcaccgaagagggagagcgagacagcctggagacgcacac
atccccccaagatctccccaggccaacgtcccacagattacaggacagaaccctccaaat
cgaaacggaggaaacggacagccattgaacatggacgaaggaatccctcatttgcaagag
agacagttactggaacatagggattttataggactggattacgcctctttgtatatgtgt
aaacccaaaaggagcttgaagcgagatgacaccaaggatacctacaaattaccgcacaga
ttaatagaaaaaaagagaagagaccgaattaatgagtgcattgctcagctgaaagattta
ctgcctgaacatctgaaattgacaacactggggcatctggagaaagcagtagttttggaa
ttaactttgaagcacttaaaagcgttaacagccttaacggagcagcagcatcagaagata
attgctttacagaatggggagcgctctctgaaatcgccggtccaggccgacttggatgcg
ttccactcggggtttcaaacctgcgccaaagaagtcttgcaatacctcgcgcgctttgag
agctggacgcccagggagccgcgctgcgcacagcttgtcagccacctgcacgccgtggcc
acccagctcctgacgccacaggtgccccagggcagggtccccggccgcgcgccctgcagc
actggggccgcggccgcccccggccttgatcgcgccgcccgctgcgtgccggtcatccag
cggactcagcccggcaccgagcctgagcacgacacggacaccgacagcggctacggaggc
gaggtggagcagggccgcgccgccgtcaagcaggagccacccggggacccgtcgcccgcg
cccaagaggccgaagctggaggcgcgcagcgcgctcctgggcccggagcccgcgctgctc
ggctcgctcgtggcgctgggcgggggggcgcccttcgcgcagccggccgccgcgcccttt
tgcctgcccttctacctgctgtcgccgtccgccgccgcctacgtgcagccctggctggac
aagagcggcctggacaagtatctgtaccccgcggcggccgcgcccttcccgttgctgtat
cctggcatccccgcggcggccgccgctgctgctgctgccttcccctgcctgtcgtccgtg
ctgtcgccgcctcccgagaaggcaggctccgccgccggtgcccccctcctggcgcacgag
gtggcgcccccggggccgctgcgcccccagcacgcgcacagccgcacccacctgccgcgc
gctgggaacccggagtgctctcaggaagatgcctcgctgcctgccaaggatgccccctga
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